Predicting protein-peptide interaction sites using distant protein complexes as structural templates
Johansson-Åkhe, Isak, Mirabello, Claudio, Wallner, Björn
Published in Scientific reports (12.03.2019)
Published in Scientific reports (12.03.2019)
Get full text
Journal Article
Unmasking AlphaFold to integrate experiments and predictions in multimeric complexes
Mirabello, Claudio, Wallner, Björn, Nystedt, Björn, Azinas, Stavros, Carroni, Marta
Published in Nature communications (09.10.2024)
Published in Nature communications (09.10.2024)
Get full text
Journal Article
aMeta: an accurate and memory-efficient ancient metagenomic profiling workflow
Pochon, Zoé, Bergfeldt, Nora, Kırdök, Emrah, Vicente, Mário, Naidoo, Thijessen, van der Valk, Tom, Altınışık, N. Ezgi, Krzewińska, Maja, Dalén, Love, Götherström, Anders, Mirabello, Claudio, Unneberg, Per, Oskolkov, Nikolay
Published in Genome Biology (23.10.2023)
Published in Genome Biology (23.10.2023)
Get full text
Journal Article
Identification of microbial pathogens in Neolithic Scandinavian humans
Bergfeldt, Nora, Kırdök, Emrah, Oskolkov, Nikolay, Mirabello, Claudio, Unneberg, Per, Malmström, Helena, Fraser, Magdalena, Sanchez-Quinto, Federico, Jorgensen, Roger, Skar, Birgitte, Lidén, Kerstin, Jakobsson, Mattias, Storå, Jan, Götherström, Anders
Published in Scientific reports (07.03.2024)
Published in Scientific reports (07.03.2024)
Get full text
Journal Article
InterPepRank: Assessment of Docked Peptide Conformations by a Deep Graph Network
Johansson-Åkhe, Isak, Mirabello, Claudio, Wallner, Björn
Published in Frontiers in bioinformatics (25.10.2021)
Published in Frontiers in bioinformatics (25.10.2021)
Get full text
Journal Article
Solution NMR structure of the TRIM21 B-box2 and identification of residues involved in its interaction with the RING domain
Wallenhammar, Amélie, Anandapadamanaban, Madhanagopal, Lemak, Alexander, Mirabello, Claudio, Lundström, Patrik, Wallner, Björn, Sunnerhagen, Maria
Published in PloS one (28.07.2017)
Published in PloS one (28.07.2017)
Get full text
Journal Article
Insights into mechanisms of MALT1 allostery from NMR and AlphaFold dynamic analyses
Wallerstein, Johan, Han, Xiao, Levkovets, Maria, Lesovoy, Dmitry, Malmodin, Daniel, Mirabello, Claudio, Wallner, Björn, Sun, Renhua, Sandalova, Tatyana, Agback, Peter, Karlsson, Göran, Achour, Adnane, Agback, Tatiana, Orekhov, Vladislav
Published in Communications biology (2024)
Published in Communications biology (2024)
Get full text
Journal Article
InterPred: A pipeline to identify and model protein–protein interactions
Mirabello, Claudio, Wallner, Björn
Published in Proteins, structure, function, and bioinformatics (01.06.2017)
Published in Proteins, structure, function, and bioinformatics (01.06.2017)
Get full text
Journal Article
Limited access to antigen drives generation of early B cell memory while restraining the plasmablast response
Glaros, Vassilis, Rauschmeier, René, Artemov, Artem V., Reinhardt, Annika, Ols, Sebastian, Emmanouilidi, Aikaterini, Gustafsson, Charlotte, You, Yuanyuan, Mirabello, Claudio, Björklund, Åsa K., Perez, Laurent, King, Neil P., Månsson, Robert, Angeletti, Davide, Loré, Karin, Adameyko, Igor, Busslinger, Meinrad, Kreslavsky, Taras
Published in Immunity (Cambridge, Mass.) (14.09.2021)
Published in Immunity (Cambridge, Mass.) (14.09.2021)
Get full text
Journal Article