Training-free atomistic prediction of nucleosome occupancy
Minary, Peter, Levitt, Michael
Published in Proceedings of the National Academy of Sciences - PNAS (29.04.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (29.04.2014)
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Journal Article
Modeling and design by hierarchical natural moves
Sim, Adelene Y. L, Levitt, Michael, Minary, Peter
Published in Proceedings of the National Academy of Sciences - PNAS (21.02.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (21.02.2012)
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Journal Article
Hierarchical natural move Monte Carlo refines flexible RNA structures into cryo-EM densities
Chang, Jeng-Yih, Cui, Zhicheng, Yang, Kailu, Huang, Jianhua, Minary, Peter, Zhang, Junjie
Published in RNA (Cambridge) (01.12.2020)
Published in RNA (Cambridge) (01.12.2020)
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Journal Article
The Evolution of Nucleic Acid-Based Diagnosis Methods from the (pre-)CRISPR to CRISPR era and the Associated Machine/Deep Learning Approaches in Relevant RNA Design
Chakraborty, Shruti Sarika, Ray Dutta, Jayati, Ganesan, Ramakrishnan, Minary, Peter
Published in Methods in molecular biology (Clifton, N.J.) (2025)
Published in Methods in molecular biology (Clifton, N.J.) (2025)
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Journal Article
Modeling nucleic acids
Sim, Adelene YL, Minary, Peter, Levitt, Michael
Published in Current opinion in structural biology (01.06.2012)
Published in Current opinion in structural biology (01.06.2012)
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Journal Article
Tuning Cytokine Receptor Signaling by Re-orienting Dimer Geometry with Surrogate Ligands
Moraga, Ignacio, Wernig, Gerlinde, Wilmes, Stephan, Gryshkova, Vitalina, Richter, Christian P., Hong, Wan-Jen, Sinha, Rahul, Guo, Feng, Fabionar, Hyna, Wehrman, Tom S., Krutzik, Peter, Demharter, Samuel, Plo, Isabelle, Weissman, Irving L., Minary, Peter, Majeti, Ravindra, Constantinescu, Stefan N., Piehler, Jacob, Garcia, K. Christopher
Published in Cell (12.03.2015)
Published in Cell (12.03.2015)
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Journal Article
Exploring peptide/MHC detachment processes using hierarchical natural move Monte Carlo
Knapp, Bernhard, Demharter, Samuel, Deane, Charlotte M, Minary, Peter
Published in Bioinformatics (Oxford, England) (15.01.2016)
Published in Bioinformatics (Oxford, England) (15.01.2016)
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Journal Article
In silico structural modeling of multiple epigenetic marks on DNA
Krawczyk, Konrad, Demharter, Samuel, Knapp, Bernhard, Deane, Charlotte M, Minary, Peter
Published in Bioinformatics (01.01.2018)
Published in Bioinformatics (01.01.2018)
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Journal Article
Modeling Functional Motions of Biological Systems by Customized Natural Moves
Demharter, Samuel, Knapp, Bernhard, Deane, Charlotte M., Minary, Peter
Published in Biophysical journal (23.08.2016)
Published in Biophysical journal (23.08.2016)
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Journal Article