CGG Repeat-Associated Translation Mediates Neurodegeneration in Fragile X Tremor Ataxia Syndrome
Todd, Peter K., Oh, Seok Yoon, Krans, Amy, He, Fang, Sellier, Chantal, Frazer, Michelle, Renoux, Abigail J., Chen, Kai-chun, Scaglione, K. Matthew, Basrur, Venkatesha, Elenitoba-Johnson, Kojo, Vonsattel, Jean P., Louis, Elan D., Sutton, Michael A., Taylor, J. Paul, Mills, Ryan E., Charlet-Berguerand, Nicholas, Paulson, Henry L.
Published in Neuron (Cambridge, Mass.) (08.05.2013)
Published in Neuron (Cambridge, Mass.) (08.05.2013)
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Journal Article
The Mobile Element Locator Tool (MELT): population-scale mobile element discovery and biology
Gardner, Eugene J, Lam, Vincent K, Harris, Daniel N, Chuang, Nelson T, Scott, Emma C, Pittard, W Stephen, Mills, Ryan E, Devine, Scott E
Published in Genome research (01.11.2017)
Published in Genome research (01.11.2017)
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Journal Article
The genomic landscape of polymorphic human nuclear mitochondrial insertions
Dayama, Gargi, Emery, Sarah B, Kidd, Jeffrey M, Mills, Ryan E
Published in Nucleic acids research (10.11.2014)
Published in Nucleic acids research (10.11.2014)
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Journal Article
Natural Mutagenesis of Human Genomes by Endogenous Retrotransposons
Iskow, Rebecca C., McCabe, Michael T., Mills, Ryan E., Torene, Spencer, Pittard, W. Stephen, Neuwald, Andrew F., Van Meir, Erwin G., Vertino, Paula M., Devine, Scott E.
Published in Cell (25.06.2010)
Published in Cell (25.06.2010)
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Journal Article
Cas9 targeted enrichment of mobile elements using nanopore sequencing
McDonald, Torrin L, Zhou, Weichen, Castro, Christopher P, Mumm, Camille, Switzenberg, Jessica A, Mills, Ryan E, Boyle, Alan P
Published in Nature communications (11.06.2021)
Published in Nature communications (11.06.2021)
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Journal Article
SquiggleNet: real-time, direct classification of nanopore signals
Bao, Yuwei, Wadden, Jack, Erb-Downward, John R, Ranjan, Piyush, Zhou, Weichen, McDonald, Torrin L, Mills, Ryan E, Boyle, Alan P, Dickson, Robert P, Blaauw, David, Welch, Joshua D
Published in Genome Biology (27.10.2021)
Published in Genome Biology (27.10.2021)
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Journal Article
RNA ligation precedes the retrotransposition of U6/LINE-1 chimeric RNA
Moldovan, John B., Wang, Yifan, Shuman, Stewart, Mills, Ryan E., Moran, John V.
Published in Proceedings of the National Academy of Sciences - PNAS (08.10.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (08.10.2019)
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Journal Article
Early HPV ctDNA Kinetics and Imaging Biomarkers Predict Therapeutic Response in p16+ Oropharyngeal Squamous Cell Carcinoma
Cao, Yue, Haring, Catherine T, Brummel, Collin, Bhambhani, Chandan, Aryal, Madhava, Lee, Choonik, Heft Neal, Molly, Bhangale, Apurva, Gu, Wenjin, Casper, Keith, Malloy, Kelly, Sun, Yilun, Shuman, Andrew, Prince, Mark E, Spector, Matthew E, Chinn, Steven, Shah, Jennifer, Schonewolf, Caitlin, McHugh, Jonathan B, Mills, Ryan E, Tewari, Muneesh, Worden, Francis P, Swiecicki, Paul L, Mierzwa, Michelle, Brenner, J Chad
Published in Clinical cancer research (15.01.2022)
Published in Clinical cancer research (15.01.2022)
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Journal Article
Somatic nuclear mitochondrial DNA insertions are prevalent in the human brain and accumulate over time in fibroblasts
Zhou, Weichen, Karan, Kalpita R, Gu, Wenjin, Klein, Hans-Ulrich, Sturm, Gabriel, De Jager, Philip L, Bennett, David A, Hirano, Michio, Picard, Martin, Mills, Ryan E
Published in PLoS biology (22.08.2024)
Published in PLoS biology (22.08.2024)
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Journal Article
Translation of upstream open reading frames in a model of neuronal differentiation
Rodriguez, Caitlin M, Chun, Sang Y, Mills, Ryan E, Todd, Peter K
Published in BMC genomics (20.05.2019)
Published in BMC genomics (20.05.2019)
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Journal Article
An initial map of insertion and deletion (INDEL) variation in the human genome
Mills, Ryan E, Luttig, Christopher T, Larkins, Christine E, Beauchamp, Adam, Tsui, Circe, Pittard, W Stephen, Devine, Scott E
Published in Genome Research (01.09.2006)
Published in Genome Research (01.09.2006)
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Journal Article
Candida albicans selection for human commensalism results in substantial within-host diversity without decreasing fitness for invasive disease
Anderson, Faith M, Visser, Noelle D, Amses, Kevin R, Hodgins-Davis, Andrea, Weber, Alexandra M, Metzner, Katura M, McFadden, Michael J, Mills, Ryan E, O'Meara, Matthew J, James, Timothy Y, O'Meara, Teresa R
Published in PLoS biology (19.05.2023)
Published in PLoS biology (19.05.2023)
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Journal Article
Natural genetic variation caused by small insertions and deletions in the human genome
Mills, Ryan E, Pittard, W Stephen, Mullaney, Julienne M, Farooq, Umar, Creasy, Todd H, Mahurkar, Anup A, Kemeza, David M, Strassler, Daniel S, Ponting, Chris P, Webber, Caleb, Devine, Scott E
Published in Genome research (01.06.2011)
Published in Genome research (01.06.2011)
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Journal Article
Active Alu retrotransposons in the human genome
Bennett, E Andrew, Keller, Heiko, Mills, Ryan E, Schmidt, Steffen, Moran, John V, Weichenrieder, Oliver, Devine, Scott E
Published in Genome Research (01.12.2008)
Published in Genome Research (01.12.2008)
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Journal Article
Complex reorganization and predominant non- homologous repair following chromosomal breakage in karyotypically balanced germline rearrangements and transgenic integration
CHIANG, Colby, JACOBSEN, Jessie C, MCLAUGHLAN, Clive J, SIMON BAWDEN, C, REID, Suzanne J, FAULL, Richard L. M, SNELL, Russell G, HALL, Ira M, YIPING SHEN, OHSUMI, Toshiro K, BOROWSKY, Mark L, DALY, Mark J, ERNST, Carl, LEE, Charles, MORTON, Cynthia C, MACDONALD, Marcy E, GUSELLA, James F, TALKOWSKI, Michael E, HANSCOM, Carrie, HEILBUT, Adrian, BLUMENTHAL, Ian, MILLS, Ryan E, KIRBY, Andrew, LINDGREN, Amelia M, RUDIGER, Skye R
Published in Nature genetics (01.04.2012)
Published in Nature genetics (01.04.2012)
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Journal Article
FusorSV: an algorithm for optimally combining data from multiple structural variation detection methods
Becker, Timothy, Lee, Wan-Ping, Leone, Joseph, Zhu, Qihui, Zhang, Chengsheng, Liu, Silvia, Sargent, Jack, Shanker, Kritika, Mil-Homens, Adam, Cerveira, Eliza, Ryan, Mallory, Cha, Jane, Navarro, Fabio C P, Galeev, Timur, Gerstein, Mark, Mills, Ryan E, Shin, Dong-Guk, Lee, Charles, Malhotra, Ankit
Published in Genome Biology (20.03.2018)
Published in Genome Biology (20.03.2018)
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Journal Article
Discovery of common Asian copy number variants using integrated high-resolution array CGH and massively parallel DNA sequencing
Lee, Charles, Seo, Jeong-Sun, Park, Hansoo, Kim, Jong-Il, Ju, Young Seok, Gokcumen, Omer, Mills, Ryan E, Kim, Sheehyun, Lee, Seungbok, Suh, Dongwhan, Hong, Dongwan, Kang, Hyunseok Peter, Yoo, Yun Joo, Shin, Jong-Yeon, Kim, Hyun-Jin, Yavartanoo, Maryam, Chang, Young Wha, Ha, Jung-Sook, Chong, Wilson, Hwang, Ga-Ram, Darvishi, Katayoon, Kim, HyeRan, Yang, Song Ju, Yang, Kap-Seok, Kim, Hyungtae, Hurles, Matthew E, Scherer, Stephen W, Carter, Nigel P, Tyler-Smith, Chris
Published in Nature genetics (01.05.2010)
Published in Nature genetics (01.05.2010)
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Journal Article
Expanding the Definition of the Classical Bipartite Nuclear Localization Signal
Lange, Allison, McLane, Laura M, Mills, Ryan E, Devine, Scott E, Corbett, Anita H
Published in Traffic (Copenhagen, Denmark) (01.03.2010)
Published in Traffic (Copenhagen, Denmark) (01.03.2010)
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Journal Article
Extensive genetic diversity and substructuring among zebrafish strains revealed through copy number variant analysis
Brown, Kim H, Dobrinski, Kimberly P, Lee, Arthur S, Gokcumen, Omer, Mills, Ryan E, Shi, Xinghua, Chong, Wilson W. S, Chen, Jin Yun Helen, Yoo, Paulo, David, Sthuthi, Peterson, Samuel M, Raj, Towfique, Choy, Kwong Wai, Stranger, Barbara E, Williamson, Robin E, Zon, Leonard I, Freeman, Jennifer L, Lee, Charles
Published in Proceedings of the National Academy of Sciences - PNAS (10.01.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (10.01.2012)
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Journal Article
Analysis of Human Papilloma Virus Content and Integration in Mucoepidermoid Carcinoma
Gu, Wenjin, Bhangale, Apurva, Heft Neal, Molly E, Smith, Josh D, Brummel, Collin, McHugh, Jonathan B, Spector, Matthew E, Mills, Ryan E, Brenner, J Chad
Published in Viruses (26.10.2022)
Published in Viruses (26.10.2022)
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Journal Article