Multi-omics of human plasma reveals molecular features of dysregulated inflammation and accelerated aging in schizophrenia
Campeau, Anaamika, Mills, Robert H., Stevens, Toer, Rossitto, Leigh-Ana, Meehan, Michael, Dorrestein, Pieter, Daly, Rebecca, Nguyen, Tanya T., Gonzalez, David J., Jeste, Dilip V., Hook, Vivian
Published in Molecular psychiatry (01.02.2022)
Published in Molecular psychiatry (01.02.2022)
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Journal Article
Location-specific signatures of Crohn's disease at a multi-omics scale
Gonzalez, Carlos G, Mills, Robert H, Zhu, Qiyun, Sauceda, Consuelo, Knight, Rob, Dulai, Parambir S, Gonzalez, David J
Published in Microbiome (24.08.2022)
Published in Microbiome (24.08.2022)
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Journal Article
Urinary Exosomes Identify Inflammatory Pathways in Vancomycin Associated Acute Kidney Injury
Awdishu, Linda, Le, Amy, Amato, Jordan, Jani, Vidhyut, Bal, Soma, Mills, Robert H, Carrillo-Terrazas, Marvic, Gonzalez, David J, Tolwani, Ashita, Acharya, Anjali, Cerda, Jorge, Joy, Melanie S, Nicoletti, Paola, Macedo, Etienne, Vaingankar, Sucheta, Mehta, Ravindra, RamachandraRao, Satish P, On Behalf Of The Direct Investigators
Published in International journal of molecular sciences (10.03.2021)
Published in International journal of molecular sciences (10.03.2021)
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Journal Article
Organ-level protein networks as a reference for the host effects of the microbiome
Mills, Robert H, Wozniak, Jacob M, Vrbanac, Alison, Campeau, Anaamika, Chassaing, Benoit, Gewirtz, Andrew, Knight, Rob, Gonzalez, David J
Published in Genome research (01.02.2020)
Published in Genome research (01.02.2020)
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Journal Article
Antimicrobials from a feline commensal bacterium inhibit skin infection by drug-resistant S. pseudintermedius
O'Neill, Alan M, Worthing, Kate A, Kulkarni, Nikhil, Li, Fengwu, Nakatsuji, Teruaki, McGrosso, Dominic, Mills, Robert H, Kalla, Gayathri, Cheng, Joyce Y, Norris, Jacqueline M, Pogliano, Kit, Pogliano, Joe, Gonzalez, David J, Gallo, Richard L
Published in eLife (19.10.2021)
Published in eLife (19.10.2021)
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Journal Article
Neutrophilic proteolysis in the cystic fibrosis lung correlates with a pathogenic microbiome
Quinn, Robert A, Adem, Sandeep, Mills, Robert H, Comstock, William, DeRight Goldasich, Lindsay, Humphrey, Gregory, Aksenov, Alexander A, Melnik, Alexei V, da Silva, Ricardo, Ackermann, Gail, Bandeira, Nuno, Gonzalez, David J, Conrad, Doug, O'Donoghue, Anthony J, Knight, Rob, Dorrestein, Pieter C
Published in Microbiome (13.02.2019)
Published in Microbiome (13.02.2019)
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Journal Article
Evaluating Metagenomic Prediction of the Metaproteome in a 4.5-Year Study of a Patient with Crohn's Disease
Mills, Robert H, Vázquez-Baeza, Yoshiki, Zhu, Qiyun, Jiang, Lingjing, Gaffney, James, Humphrey, Greg, Smarr, Larry, Knight, Rob, Gonzalez, David J
Published in mSystems (01.01.2019)
Published in mSystems (01.01.2019)
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Journal Article
The Host-Microbiome Response to Hyperbaric Oxygen Therapy in Ulcerative Colitis Patients
Gonzalez, Carlos G., Mills, Robert H., Kordahi, Melissa C., Carrillo-Terrazas, Marvic, Secaira-Morocho, Henry, Widjaja, Christella E., Tsai, Matthew S., Mittal, Yash, Yee, Brian A., Vargas, Fernando, Weldon, Kelly, Gauglitz, Julia M., Delaroque, Clara, Sauceda, Consuelo, Rossitto, Leigh-Ana, Ackermann, Gail, Humphrey, Gregory, Swafford, Austin D., Siegel, Corey A., Buckey, Jay C., Raffals, Laura E., Sadler, Charlotte, Lindholm, Peter, Fisch, Kathleen M., Valaseck, Mark, Suriawinata, Arief, Yeo, Gene W., Ghosh, Pradipta, Chang, John T., Chu, Hiutung, Dorrestein, Pieter, Zhu, Qiyun, Chassaing, Benoit, Knight, Rob, Gonzalez, David J., Dulai, Parambir S.
Published in Cellular and molecular gastroenterology and hepatology (01.01.2022)
Published in Cellular and molecular gastroenterology and hepatology (01.01.2022)
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Journal Article
Evaluating Organism-Wide Changes in the Metabolome and Microbiome following a Single Dose of Antibiotic
Vrbanac, Alison, Patras, Kathryn A., Jarmusch, Alan K., Mills, Robert H., Shing, Samuel R., Quinn, Robert A., Vargas, Fernando, Gonzalez, David J., Dorrestein, Pieter C., Knight, Rob, Nizet, Victor
Published in mSystems (06.10.2020)
Published in mSystems (06.10.2020)
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Journal Article
Identification of a Human Skin Commensal Bacterium that Selectively Kills Cutibacterium acnes
O’Neill, Alan M., Nakatsuji, Teruaki, Hayachi, Asumi, Williams, Michael R., Mills, Robert H., Gonzalez, David J., Gallo, Richard L.
Published in Journal of investigative dermatology (01.08.2020)
Published in Journal of investigative dermatology (01.08.2020)
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Journal Article
Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Signatures
Wozniak, Jacob M., Mills, Robert H., Olson, Joshua, Caldera, J.R., Sepich-Poore, Gregory D., Carrillo-Terrazas, Marvic, Tsai, Chih-Ming, Vargas, Fernando, Knight, Rob, Dorrestein, Pieter C., Liu, George Y., Nizet, Victor, Sakoulas, George, Rose, Warren, Gonzalez, David J.
Published in Cell (03.09.2020)
Published in Cell (03.09.2020)
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Journal Article
Multi-level analysis of the gut–brain axis shows autism spectrum disorder-associated molecular and microbial profiles
Morton, James T., Jin, Dong-Min, Mills, Robert H., Shao, Yan, Rahman, Gibraan, McDonald, Daniel, Zhu, Qiyun, Balaban, Metin, Jiang, Yueyu, Cantrell, Kalen, Gonzalez, Antonio, Carmel, Julie, Frankiensztajn, Linoy Mia, Martin-Brevet, Sandra, Berding, Kirsten, Needham, Brittany D., Zurita, María Fernanda, David, Maude, Averina, Olga V., Kovtun, Alexey S., Noto, Antonio, Mussap, Michele, Wang, Mingbang, Frank, Daniel N., Li, Ellen, Zhou, Wenhao, Fanos, Vassilios, Danilenko, Valery N., Wall, Dennis P., Cárdenas, Paúl, Baldeón, Manuel E., Jacquemont, Sébastien, Koren, Omry, Elliott, Evan, Xavier, Ramnik J., Mazmanian, Sarkis K., Knight, Rob, Gilbert, Jack A., Donovan, Sharon M., Lawley, Trevor D., Carpenter, Bob, Bonneau, Richard, Taroncher-Oldenburg, Gaspar
Published in Nature neuroscience (01.07.2023)
Published in Nature neuroscience (01.07.2023)
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Journal Article
Multi-omics analyses of the ulcerative colitis gut microbiome link Bacteroides vulgatus proteases with disease severity
Mills, Robert H., Dulai, Parambir S., Vázquez-Baeza, Yoshiki, Sauceda, Consuelo, Daniel, Noëmie, Gerner, Romana R., Batachari, Lakshmi E., Malfavon, Mario, Zhu, Qiyun, Weldon, Kelly, Humphrey, Greg, Carrillo-Terrazas, Marvic, Goldasich, Lindsay DeRight, Bryant, MacKenzie, Raffatellu, Manuela, Quinn, Robert A., Gewirtz, Andrew T., Chassaing, Benoit, Chu, Hiutung, Sandborn, William J., Dorrestein, Pieter C., Knight, Rob, Gonzalez, David J.
Published in Nature microbiology (01.02.2022)
Published in Nature microbiology (01.02.2022)
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Journal Article
Associations of the Fecal Microbial Proteome Composition and Proneness to Diet-induced Obesity[S]
Tran, Hao Q., Mills, Robert H., Peters, Nicole V., Holder, Mary K., de Vries, Geert J., Knight, Rob, Chassaing, Benoit, Gonzalez, David J., Gewirtz, Andrew T.
Published in Molecular & cellular proteomics (01.09.2019)
Published in Molecular & cellular proteomics (01.09.2019)
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Journal Article
Mass Spectrometry-Based Visualization of Molecules Associated with Human Habitats
Petras, Daniel, Nothias, Louis-Félix, Quinn, Robert A, Alexandrov, Theodore, Bandeira, Nuno, Bouslimani, Amina, Castro-Falcón, Gabriel, Chen, Liangyu, Dang, Tam, Floros, Dimitrios J, Hook, Vivian, Garg, Neha, Hoffner, Nicole, Jiang, Yike, Kapono, Clifford A, Koester, Irina, Knight, Rob, Leber, Christopher A, Ling, Tie-Jun, Luzzatto-Knaan, Tal, McCall, Laura-Isobel, McGrath, Aaron P, Meehan, Michael J, Merritt, Jonathan K, Mills, Robert H, Morton, Jamie, Podvin, Sonia, Protsyuk, Ivan, Purdy, Trevor, Satterfield, Kendall, Searles, Stephen, Shah, Sahil, Shires, Sarah, Steffen, Dana, White, Margot, Todoric, Jelena, Tuttle, Robert, Wojnicz, Aneta, Sapp, Valerie, Vargas, Fernando, Yang, Jin, Zhang, Chao, Dorrestein, Pieter C
Published in Analytical chemistry (Washington) (15.11.2016)
Published in Analytical chemistry (Washington) (15.11.2016)
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Journal Article
Peptide Inhibitors Targeting the Neisseria gonorrhoeae Pivotal Anaerobic Respiration Factor AniA
Sikora, Aleksandra E, Mills, Robert H, Weber, Jacob V, Hamza, Adel, Passow, Bryan W, Romaine, Andrew, Williamson, Zachary A, Reed, Robert W, Zielke, Ryszard A, Korotkov, Konstantin V
Published in Antimicrobial agents and chemotherapy (01.08.2017)
Published in Antimicrobial agents and chemotherapy (01.08.2017)
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Journal Article
Defining Host Responses during Systemic Bacterial Infection through Construction of a Murine Organ Proteome Atlas
Lapek, John D., Mills, Robert H., Wozniak, Jacob M., Campeau, Anaamika, Fang, Ronnie H., Wei, Xiaoli, van de Groep, Kirsten, Perez-Lopez, Araceli, van Sorge, Nina M., Raffatellu, Manuela, Knight, Rob, Zhang, Liangfang, Gonzalez, David J.
Published in Cell systems (23.05.2018)
Published in Cell systems (23.05.2018)
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Journal Article
Multidimensional Proteome Profiling of Blood-Brain Barrier Perturbation by Group B Streptococcus
Campeau, Anaamika, Mills, Robert H., Blanchette, Marie, Bajc, Kaja, Malfavon, Mario, Munji, Roeben N., Deng, Liwen, Hancock, Bryan, Patras, Kathryn A., Olson, Joshua, Nizet, Victor, Daneman, Richard, Doran, Kelly, Gonzalez, David J.
Published in mSystems (25.08.2020)
Published in mSystems (25.08.2020)
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Journal Article
Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Molecular Signatures
Wozniak, Jacob M., Mills, Robert H., Olson, Joshua, Caldera, JR, Sepich-Poore, Gregory D., Carrillo-Terrazas, Marvic, Tsai, Chih-Ming, Vargas, Fernando, Knight, Rob, Dorrestein, Pieter C., Liu, George Y., Nizet, Victor, Sakoulas, George, Rose, Warren, Gonzalez, David J.
Published in Cell (03.09.2020)
Published in Cell (03.09.2020)
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Journal Article
Associations of the Fecal Microbial Proteome Composition and Proneness to Diet-induced Obesity
Tran, Hao Q, Mills, Robert H, Peters, Nicole V, Holder, Mary K, de Vries, Geert J, Knight, Rob, Chassaing, Benoit, Gonzalez, David J, Gewirtz, Andrew T
Published in Molecular & cellular proteomics (01.09.2019)
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Published in Molecular & cellular proteomics (01.09.2019)
Journal Article