A computational approach to distinguish somatic vs. germline origin of genomic alterations from deep sequencing of cancer specimens without a matched normal
Sun, James X, He, Yuting, Sanford, Eric, Montesion, Meagan, Frampton, Garrett M, Vignot, Stéphane, Soria, Jean-Charles, Ross, Jeffrey S, Miller, Vincent A, Stephens, Phil J, Lipson, Doron, Yelensky, Roman
Published in PLoS computational biology (07.02.2018)
Published in PLoS computational biology (07.02.2018)
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Tumor Mutational Burden as an Independent Predictor of Response to Immunotherapy in Diverse Cancers
Goodman, Aaron M, Kato, Shumei, Bazhenova, Lyudmila, Patel, Sandip P, Frampton, Garrett M, Miller, Vincent, Stephens, Philip J, Daniels, Gregory A, Kurzrock, Razelle
Published in Molecular cancer therapeutics (01.11.2017)
Published in Molecular cancer therapeutics (01.11.2017)
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Molecular profiling of cancer patients enables personalized combination therapy: the I-PREDICT study
Sicklick, Jason K, Kato, Shumei, Okamura, Ryosuke, Schwaederle, Maria, Hahn, Michael E, Williams, Casey B, De, Pradip, Krie, Amy, Piccioni, David E, Miller, Vincent A, Ross, Jeffrey S, Benson, Adam, Webster, Jennifer, Stephens, Philip J, Lee, J Jack, Fanta, Paul T, Lippman, Scott M, Leyland-Jones, Brian, Kurzrock, Razelle
Published in Nature medicine (01.05.2019)
Published in Nature medicine (01.05.2019)
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Enrichment of Targetable Mutations in the Relapsed Neuroblastoma Genome
Padovan-Merhar, Olivia M, Raman, Pichai, Ostrovnaya, Irina, Kalletla, Karthik, Rubnitz, Kaitlyn R, Sanford, Eric M, Ali, Siraj M, Miller, Vincent A, Mossé, Yael P, Granger, Meaghan P, Weiss, Brian, Maris, John M, Modak, Shakeel
Published in PLoS genetics (01.12.2016)
Published in PLoS genetics (01.12.2016)
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Analysis of 100,000 human cancer genomes reveals the landscape of tumor mutational burden
Chalmers, Zachary R, Connelly, Caitlin F, Fabrizio, David, Gay, Laurie, Ali, Siraj M, Ennis, Riley, Schrock, Alexa, Campbell, Brittany, Shlien, Adam, Chmielecki, Juliann, Huang, Franklin, He, Yuting, Sun, James, Tabori, Uri, Kennedy, Mark, Lieber, Daniel S, Roels, Steven, White, Jared, Otto, Geoffrey A, Ross, Jeffrey S, Garraway, Levi, Miller, Vincent A, Stephens, Phillip J, Frampton, Garrett M
Published in Genome medicine (19.04.2017)
Published in Genome medicine (19.04.2017)
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New Strategies in Overcoming Acquired Resistance to Epidermal Growth Factor Receptor Tyrosine Kinase Inhibitors in Lung Cancer
OXNARD, Geoffrey R, ARCILA, Maria E, CHMIELECKI, Juliann, LADANYI, Marc, MILLER, Vincent A, PAO, William
Published in Clinical cancer research (01.09.2011)
Published in Clinical cancer research (01.09.2011)
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Clinical Characteristics of Patients With Lung Adenocarcinomas Harboring BRAF Mutations
PAIK, Paul K, ARCILA, Maria E, FARA, Michael, SIMA, Camelia S, MILLER, Vincent A, KRIS, Mark G, LADANYI, Marc, RIELY, Gregory J
Published in Journal of clinical oncology (20.05.2011)
Published in Journal of clinical oncology (20.05.2011)
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Analysis of Tumor Specimens at the Time of Acquired Resistance to EGFR-TKI Therapy in 155 Patients with EGFR-Mutant Lung Cancers
YU, Helena A, ARCILA, Maria E, REKHTMAN, Natasha, SIMA, Camelia S, ZAKOWSKI, Maureen F, PAO, William, KRIS, Mark G, MILLER, Vincent A, LADANYI, Marc, RIELY, Gregory J
Published in Clinical cancer research (15.04.2013)
Published in Clinical cancer research (15.04.2013)
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Afatinib versus placebo for patients with advanced, metastatic non-small-cell lung cancer after failure of erlotinib, gefitinib, or both, and one or two lines of chemotherapy (LUX-Lung 1): a phase 2b/3 randomised trial
Miller, Vincent A, Prof, Hirsh, Vera, MD, Cadranel, Jacques, Prof, Chen, Yuh-Min, MD, Park, Keunchil, Prof, Kim, Sang-We, Prof, Zhou, Caicun, Prof, Su, Wu-Chou, Prof, Wang, Mengzhao, Prof, Sun, Yan, Prof, Heo, Dae Seog, Prof, Crino, Lucio, Prof, Tan, Eng-Huat, MD, Chao, Tsu-Yi, Prof, Shahidi, Mehdi, MD, Cong, Xiuyu Julie, PhD, Lorence, Robert M, MD, Yang, James Chih-Hsin, Prof
Published in The lancet oncology (01.05.2012)
Published in The lancet oncology (01.05.2012)
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Association of Patient Characteristics and Tumor Genomics With Clinical Outcomes Among Patients With Non–Small Cell Lung Cancer Using a Clinicogenomic Database
Singal, Gaurav, Miller, Peter G, Agarwala, Vineeta, Li, Gerald, Kaushik, Gaurav, Backenroth, Daniel, Gossai, Anala, Frampton, Garrett M, Torres, Aracelis Z, Lehnert, Erik M, Bourque, David, O’Connell, Claire, Bowser, Bryan, Caron, Thomas, Baydur, Ezra, Seidl-Rathkopf, Kathi, Ivanov, Ivan, Alpha-Cobb, Garrett, Guria, Ameet, He, Jie, Frank, Shannon, Nunnally, Allen C, Bailey, Mark, Jaskiw, Ann, Feuchtbaum, Dana, Nussbaum, Nathan, Abernethy, Amy P, Miller, Vincent A
Published in JAMA : the journal of the American Medical Association (09.04.2019)
Published in JAMA : the journal of the American Medical Association (09.04.2019)
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The distribution of BRAF gene fusions in solid tumors and response to targeted therapy
Ross, Jeffrey S., Wang, Kai, Chmielecki, Juliann, Gay, Laurie, Johnson, Adrienne, Chudnovsky, Jacob, Yelensky, Roman, Lipson, Doron, Ali, Siraj M, Elvin, Julia A., Vergilio, Jo‐Anne, Roels, Steven, Miller, Vincent A, Nakamura, Brooke N., Gray, Adam, Wong, Michael K, Stephens, Philip J
Published in International journal of cancer (15.02.2016)
Published in International journal of cancer (15.02.2016)
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D538G Mutation in Estrogen Receptor-α: A Novel Mechanism for Acquired Endocrine Resistance in Breast Cancer
MERENBAKH-LAMIN, Keren, BEN-BARUCH, Noa, RIZEL, Shulamith, KLEIN, Baruch, RUBINEK, Tami, WOLF, Ido, YEHESKEL, Adva, DVIR, Addie, SOUSSAN-GUTMAN, Lior, JESELSOHN, Rinath, YELENSKY, Roman, BROWN, Myles, MILLER, Vincent A, SARID, David
Published in Cancer research (Chicago, Ill.) (01.12.2013)
Published in Cancer research (Chicago, Ill.) (01.12.2013)
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Real-Time Targeted Genome Profile Analysis of Pancreatic Ductal Adenocarcinomas Identifies Genetic Alterations That Might Be Targeted With Existing Drugs or Used as Biomarkers
Singhi, Aatur D., George, Ben, Greenbowe, Joel R., Chung, Jon, Suh, James, Maitra, Anirban, Klempner, Samuel J., Hendifar, Andrew, Milind, Javle M., Golan, Talia, Brand, Randall E., Zureikat, Amer H., Roy, Somak, Schrock, Alexa B., Miller, Vincent A., Ross, Jeffrey S., Ali, Siraj M., Bahary, Nathan
Published in Gastroenterology (New York, N.Y. 1943) (01.06.2019)
Published in Gastroenterology (New York, N.Y. 1943) (01.06.2019)
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Targeting HER2 in colorectal cancer: The landscape of amplification and short variant mutations in ERBB2 and ERBB3
Ross, Jeffrey S., Fakih, Marwan, Ali, Siraj M., Elvin, Julia A., Schrock, Alexa B., Suh, James, Vergilio, Jo‐Anne, Ramkissoon, Shakti, Severson, Eric, Daniel, Sugganth, Fabrizio, David, Frampton, Garrett, Sun, James, Miller, Vincent A., Stephens, Philip J., Gay, Laurie M.
Published in Cancer (01.04.2018)
Published in Cancer (01.04.2018)
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Impact of EML4-ALK Variant on Resistance Mechanisms and Clinical Outcomes in ALK-Positive Lung Cancer
Lin, Jessica J, Zhu, Viola W, Yoda, Satoshi, Yeap, Beow Y, Schrock, Alexa B, Dagogo-Jack, Ibiayi, Jessop, Nicholas A, Jiang, Ginger Y, Le, Long P, Gowen, Kyle, Stephens, Philip J, Ross, Jeffrey S, Ali, Siraj M, Miller, Vincent A, Johnson, Melissa L, Lovly, Christine M, Hata, Aaron N, Gainor, Justin F, Iafrate, Anthony J, Shaw, Alice T, Ou, Sai-Hong Ignatius
Published in Journal of clinical oncology (20.04.2018)
Published in Journal of clinical oncology (20.04.2018)
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Inflammatory myofibroblastic tumors harbor multiple potentially actionable kinase fusions
Lovly, Christine M, Gupta, Abha, Lipson, Doron, Otto, Geoff, Brennan, Tina, Chung, Catherine T, Borinstein, Scott C, Ross, Jeffrey S, Stephens, Philip J, Miller, Vincent A, Coffin, Cheryl M
Published in Cancer discovery (01.08.2014)
Published in Cancer discovery (01.08.2014)
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Diverse EGFR Exon 20 Insertions and Co-Occurring Molecular Alterations Identified by Comprehensive Genomic Profiling of NSCLC
Riess, Jonathan W., Gandara, David R., Frampton, Garrett M., Madison, Russell, Peled, Nir, Bufill, Jose A., Dy, Grace K., Ou, Sai-Hong Ignatius, Stephens, Philip J., McPherson, John D., Lara, Primo N., Burich, Rebekah A., Ross, Jeffrey S., Miller, Vincent A., Ali, Siraj M., Mack, Philip C., Schrock, Alexa B.
Published in Journal of thoracic oncology (01.10.2018)
Published in Journal of thoracic oncology (01.10.2018)
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