Non-Negative Matrix Tri-Factorization for Representation Learning in Multi-Omics Datasets with Applications to Drug Repurposing and Selection
Messa, Letizia, Testa, Carolina, Carelli, Stephana, Rey, Federica, Jacchetti, Emanuela, Cereda, Cristina, Raimondi, Manuela Teresa, Ceri, Stefano, Pinoli, Pietro
Published in International journal of molecular sciences (04.09.2024)
Published in International journal of molecular sciences (04.09.2024)
Get full text
Journal Article
Identification of a novel pathway in sporadic Amyotrophic Lateral Sclerosis mediated by the long non-coding RNA ZEB1-AS1
Rey, Federica, Maghraby, Erika, Messa, Letizia, Esposito, Letizia, Barzaghini, Bianca, Pandini, Cecilia, Bordoni, Matteo, Gagliardi, Stella, Diamanti, Luca, Raimondi, Manuela Teresa, Mazza, Massimiliano, Zuccotti, Gianvincenzo, Carelli, Stephana, Cereda, Cristina
Published in Neurobiology of disease (01.03.2023)
Published in Neurobiology of disease (01.03.2023)
Get full text
Journal Article
Dissecting the Effect of a 3D Microscaffold on the Transcriptome of Neural Stem Cells with Computational Approaches: A Focus on Mechanotransduction
Rey, Federica, Pandini, Cecilia, Barzaghini, Bianca, Messa, Letizia, Giallongo, Toniella, Pansarasa, Orietta, Gagliardi, Stella, Brilli, Matteo, Zuccotti, Gian Vincenzo, Cereda, Cristina, Raimondi, Manuela Teresa, Carelli, Stephana
Published in International journal of molecular sciences (15.09.2020)
Published in International journal of molecular sciences (15.09.2020)
Get full text
Journal Article
Transcriptome Analysis of Subcutaneous Adipose Tissue from Severely Obese Patients Highlights Deregulation Profiles in Coding and Non-Coding Oncogenes
Rey, Federica, Messa, Letizia, Pandini, Cecilia, Launi, Rossella, Barzaghini, Bianca, Micheletto, Giancarlo, Raimondi, Manuela Teresa, Bertoli, Simona, Cereda, Cristina, Zuccotti, Gian Vincenzo, Cancello, Raffaella, Carelli, Stephana
Published in International journal of molecular sciences (17.02.2021)
Published in International journal of molecular sciences (17.02.2021)
Get full text
Journal Article
Breast cancer patient-derived organoids for the investigation of patient-specific tumour evolution
Mazzucchelli, Serena, Signati, Lorena, Messa, Letizia, Franceschini, Alma, Bonizzi, Arianna, Castagnoli, Lorenzo, Gasparini, Patrizia, Consolandi, Clarissa, Mangano, Eleonora, Pelucchi, Paride, Cifola, Ingrid, Camboni, Tania, Severgnini, Marco, Villani, Laura, Tagliaferri, Barbara, Carelli, Stephana, Pupa, Serenella M., Cereda, Cristina, Corsi, Fabio
Published in Cancer cell international (27.06.2024)
Published in Cancer cell international (27.06.2024)
Get full text
Journal Article
Towards genomic-Newborn Screening: Technical feasibility of Exome Sequencing starting from dried blood spots
Mauri, Alessia, Berardo, Clarissa, Biganzoli, Davide, Meta, Andrea, Benedetti, Sara, Rey, Federica, Messa, Letizia, Zuccotti, Gian Vincenzo, Carelli, Stephana, Alberti, Luisella, Cereda, Cristina
Published in Molecular genetics and metabolism reports (01.06.2024)
Published in Molecular genetics and metabolism reports (01.06.2024)
Get full text
Journal Article
Bone Marrow Mesenchymal Stem Cells Expanded Inside the Nichoid Micro-Scaffold: a Focus on Anti-Inflammatory Response
Barzaghini, Bianca, Carelli, Stephana, Messa, Letizia, Rey, Federica, Avanzini, Maria Antonietta, Jacchetti, Emanuela, Maghraby, Erika, Berardo, Clarissa, Zuccotti, Gianvincenzo, Raimondi, Manuela Teresa, Cereda, Cristina, Calcaterra, Valeria, Pelizzo, Gloria
Published in Regenerative engineering and translational medicine (01.12.2023)
Published in Regenerative engineering and translational medicine (01.12.2023)
Get full text
Journal Article
3D photopolymerized microstructured scaffolds influence nuclear deformation, nucleo/cytoskeletal protein organization, and gene regulation in mesenchymal stem cells
Donnaloja, Francesca, Raimondi, Manuela Teresa, Messa, Letizia, Barzaghini, Bianca, Carnevali, Federica, Colombo, Emanuele, Mazza, Davide, Martinelli, Chiara, Boeri, Lucia, Rey, Federica, Cereda, Cristina, Osellame, Roberto, Cerullo, Giulio, Carelli, Stephana, Soncini, Monica, Jacchetti, Emanuela
Published in APL bioengineering (01.09.2023)
Published in APL bioengineering (01.09.2023)
Get full text
Journal Article
Redox Imbalance in Neurological Disorders in Adults and Children
Rey, Federica, Berardo, Clarissa, Maghraby, Erika, Mauri, Alessia, Messa, Letizia, Esposito, Letizia, Casili, Giovanna, Ottolenghi, Sara, Bonaventura, Eleonora, Cuzzocrea, Salvatore, Zuccotti, Gianvincenzo, Tonduti, Davide, Esposito, Emanuela, Paterniti, Irene, Cereda, Cristina, Carelli, Stephana
Published in Antioxidants (01.04.2023)
Published in Antioxidants (01.04.2023)
Get full text
Journal Article
Neural Precursor Cells Expanded Inside the 3D Micro-Scaffold Nichoid Present Different Non-Coding RNAs Profiles and Transcript Isoforms Expression: Possible Epigenetic Modulation by 3D Growth
Messa, Letizia, Barzaghini, Bianca, Rey, Federica, Pandini, Cecilia, Zuccotti, Gian Vincenzo, Cereda, Cristina, Carelli, Stephana Carelli, Raimondi, Manuela Teresa
Published in Biomedicines (31.08.2021)
Published in Biomedicines (31.08.2021)
Get full text
Journal Article
Subcutaneous Adipose Tissue Transcriptome Highlights Specific Expression Profiles in Severe Pediatric Obesity: A Pilot Study
Berardo, Clarissa, Calcaterra, Valeria, Mauri, Alessia, Carelli, Stephana, Messa, Letizia, Destro, Francesca, Rey, Federica, Cordaro, Erika, Pelizzo, Gloria, Zuccotti, Gianvincenzo, Cereda, Cristina
Published in Cells (Basel, Switzerland) (01.04.2023)
Published in Cells (Basel, Switzerland) (01.04.2023)
Get full text
Journal Article
RNA-seq Characterization of Sex-Differences in Adipose Tissue of Obesity Affected Patients: Computational Analysis of Differentially Expressed Coding and Non-Coding RNAs
Rey, Federica, Messa, Letizia, Pandini, Cecilia, Maghraby, Erika, Barzaghini, Bianca, Garofalo, Maria, Micheletto, Giancarlo, Raimondi, Manuela Teresa, Bertoli, Simona, Cereda, Cristina, Zuccotti, Gian Vincenzo, Cancello, Raffaella, Carelli, Stephana
Published in Journal of personalized medicine (28.04.2021)
Published in Journal of personalized medicine (28.04.2021)
Get full text
Journal Article
RNA-seq dataset of subcutaneous adipose tissue: Transcriptional differences between obesity and healthy women
Messa, Letizia, Rey, Federica, Pandini, Cecilia, Barzaghini, Bianca, Micheletto, Giancarlo, Raimondi, Manuela Teresa, Bertoli, Simona, Cereda, Cristina, Zuccotti, Gianvincenzo, Cancello, Raffaella, Carelli, Stephana
Published in Data in brief (01.12.2021)
Published in Data in brief (01.12.2021)
Get full text
Journal Article
α‐Synuclein antisense transcript SNCA‐AS1 regulates synapses‐ and aging‐related genes suggesting its implication in Parkinson's disease
Rey, Federica, Pandini, Cecilia, Messa, Letizia, Launi, Rossella, Barzaghini, Bianca, Zangaglia, Roberta, Raimondi, Manuela Teresa, Gagliardi, Stella, Cereda, Cristina, Zuccotti, Gian Vincenzo, Carelli, Stephana
Published in Aging cell (01.12.2021)
Published in Aging cell (01.12.2021)
Get full text
Journal Article
Epigenetic Impact on Pediatric Obesity: Implication of Long Non-Coding RNAs
Berardo, Clarissa, Mauri, Alessia, Messa, Letizia, Rey, Federica, Cordaro, Erika, Pelizzo, Gloria, Zuccotti, Gianvincenzo, Carelli, Stephana, Calcaterra, Valeria, Cereda, Cristina
Published in Obesity (Silver Spring, Md.) (01.11.2022)
Get full text
Published in Obesity (Silver Spring, Md.) (01.11.2022)
Journal Article
Oxygen Sensing in Neurodegenerative Diseases: Current Mechanisms, Implication of Transcriptional Response, and Pharmacological Modulation
Rey, Federica, Messa, Letizia, Maghraby, Erika, Casili, Giovanna, Ottolenghi, Sara, Barzaghini, Bianca, Raimondi, Manuela Teresa, Cereda, Cristina, Cuzzocrea, Salvatore, Zuccotti, Gianvincenzo, Esposito, Emanuela, Paterniti, Irene, Carelli, Stephana
Published in Antioxidants & redox signaling (01.01.2023)
Published in Antioxidants & redox signaling (01.01.2023)
Get more information
Journal Article
Transcriptional characterization of subcutaneous adipose tissue in obesity affected women highlights metabolic dysfunction and implications for lncRNAs
Rey, Federica, Messa, Letizia, Pandini, Cecilia, Barzaghini, Bianca, Micheletto, Giancarlo, Raimondi, Manuela Teresa, Bertoli, Simona, Cereda, Cristina, Zuccotti, Gian Vincenzo, Cancello, Raffaella, Carelli, Stephana
Published in Genomics (San Diego, Calif.) (01.11.2021)
Published in Genomics (San Diego, Calif.) (01.11.2021)
Get full text
Journal Article
Transcriptomic and metabolomic changes might predict frailty in SAMP8 mice
Dacomo, Letizia, La Vitola, Pietro, Brunelli, Laura, Messa, Letizia, Micotti, Edoardo, Artioli, Luisa, Sinopoli, Elena, Cecutti, Greta, Leva, Susanna, Gagliardi, Stella, Pansarasa, Orietta, Carelli, Stephana, Guaita, Antonio, Pastorelli, Roberta, Forloni, Gianluigi, Cereda, Cristina, Balducci, Claudia
Published in Aging cell (03.07.2024)
Published in Aging cell (03.07.2024)
Get full text
Journal Article
Gene expression analysis in subcutaneous adipose tissue reveals a predominant influence of lncRNAs during growth
Rey, Federica, Messa, Letizia, Berardo, Clarissa, Mauri, Alessia, Zuccotti, Gianvincenzo, Cereda, Cristina, Carelli, Stephana
Published in Genes & diseases (01.06.2024)
Published in Genes & diseases (01.06.2024)
Get full text
Journal Article
Long-term cytokine profile in multisystem inflammatory disease among children
Calcaterra, Valeria, Loretelli, Cristian, Biganzoli, Davide, Abdelsalam, Ahmed, Marano, Giuseppe, Carelli, Stephana, Fiori, Laura, Mannarino, Savina, D’Auria, Enza, Verduci, Elvira, De Santis, Raffaella, Dilillo, Dario, Fabiano, Valentina, Carlucci, Patrizia, Maghraby, Erika, Messa, Letizia, Cereda, Cristina, Fiorina, Paolo, Biganzoli, Elia, Zuccotti, Gianvincenzo
Published in Cytokine (Philadelphia, Pa.) (01.11.2024)
Published in Cytokine (Philadelphia, Pa.) (01.11.2024)
Get full text
Journal Article