The Dimensions, Dynamics, and Relevance of the Mammalian Noncoding Transcriptome
Deveson, Ira W, Hardwick, Simon A, Mercer, Tim R, Mattick, John S
Published in Trends in genetics (01.07.2017)
Published in Trends in genetics (01.07.2017)
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Journal Article
Human Mitochondrial Transcriptome
Mercer, Tim R, Neph, Shane, Dinger, Marcel E, Crawford, Joanna, Smith, Martin A, Shearwood, Anne-Marie J, Haugen, Eric, Bracken, Cameron P, Rackham, Oliver, Stamatoyannopoulos, John A, Filipovska, Aleksandra, Mattick, John S
Published in Cell (19.08.2011)
Published in Cell (19.08.2011)
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Journal Article
Diagnosis of fusion genes using targeted RNA sequencing
Heyer, Erin E., Deveson, Ira W., Wooi, Danson, Selinger, Christina I., Lyons, Ruth J., Hayes, Vanessa M., O’Toole, Sandra A., Ballinger, Mandy L., Gill, Devinder, Thomas, David M., Mercer, Tim R., Blackburn, James
Published in Nature communications (27.03.2019)
Published in Nature communications (27.03.2019)
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Journal Article
Eukaryotic Genome as an RNA Machine
Amaral, Paulo P, Dinger, Marcel E, Mercer, Tim R, Mattick, John S
Published in Science (American Association for the Advancement of Science) (28.03.2008)
Published in Science (American Association for the Advancement of Science) (28.03.2008)
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Journal Article
Extracellular Vesicles from Neural Stem Cells Transfer IFN-γ via Ifngr1 to Activate Stat1 Signaling in Target Cells
Cossetti, Chiara, Iraci, Nunzio, Mercer, Tim R., Leonardi, Tommaso, Alpi, Emanuele, Drago, Denise, Alfaro-Cervello, Clara, Saini, Harpreet K., Davis, Matthew P., Schaeffer, Julia, Vega, Beatriz, Stefanini, Matilde, Zhao, CongJian, Muller, Werner, Garcia-Verdugo, Jose Manuel, Mathivanan, Suresh, Bachi, Angela, Enright, Anton J., Mattick, John S., Pluchino, Stefano
Published in Molecular cell (23.10.2014)
Published in Molecular cell (23.10.2014)
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Journal Article
Genome-wide discovery of human splicing branchpoints
Mercer, Tim R, Clark, Michael B, Andersen, Stacey B, Brunck, Marion E, Haerty, Wilfried, Crawford, Joanna, Taft, Ryan J, Nielsen, Lars K, Dinger, Marcel E, Mattick, John S
Published in Genome research (01.02.2015)
Published in Genome research (01.02.2015)
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Journal Article
Lymphoma Driver Mutations in the Pathogenic Evolution of an Iconic Human Autoantibody
Singh, Mandeep, Jackson, Katherine J.L., Wang, Jing J., Schofield, Peter, Field, Matt A., Koppstein, David, Peters, Timothy J., Burnett, Deborah L., Rizzetto, Simone, Nevoltris, Damien, Masle-Farquhar, Etienne, Faulks, Megan L., Russell, Amanda, Gokal, Divya, Hanioka, Asami, Horikawa, Keisuke, Colella, Alexander D., Chataway, Timothy K., Blackburn, James, Mercer, Tim R., Langley, David B., Goodall, D. Margaret, Jefferis, Roy, Gangadharan Komala, Muralikrishna, Kelleher, Anthony D., Suan, Dan, Rischmueller, Maureen, Christ, Daniel, Brink, Robert, Luciani, Fabio, Gordon, Tom P., Goodnow, Christopher C., Reed, Joanne H.
Published in Cell (05.03.2020)
Published in Cell (05.03.2020)
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Journal Article
Specific expression of long noncoding RNAs in the mouse brain
Mercer, Tim R, Dinger, Marcel E, Sunkin, Susan M, Mehler, Mark F, Mattick, John S
Published in Proceedings of the National Academy of Sciences - PNAS (15.01.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (15.01.2008)
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Journal Article
Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation
Mercer, Tim R, Qureshi, Irfan A, Gokhan, Solen, Dinger, Marcel E, Li, Guangyu, Mattick, John S, Mehler, Mark F
Published in BMC neuroscience (05.02.2010)
Published in BMC neuroscience (05.02.2010)
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Journal Article
Long-read cDNA sequencing identifies functional pseudogenes in the human transcriptome
Troskie, Robin-Lee, Jafrani, Yohaann, Mercer, Tim R, Ewing, Adam D, Faulkner, Geoffrey J, Cheetham, Seth W
Published in Genome Biology (10.05.2021)
Published in Genome Biology (10.05.2021)
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Journal Article
Machine learning annotation of human branchpoints
Signal, Bethany, Gloss, Brian S, Dinger, Marcel E, Mercer, Tim R
Published in Bioinformatics (15.03.2018)
Published in Bioinformatics (15.03.2018)
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Journal Article
Synthetic microbe communities provide internal reference standards for metagenome sequencing and analysis
Hardwick, Simon A., Chen, Wendy Y., Wong, Ted, Kanakamedala, Bindu S., Deveson, Ira W., Ongley, Sarah E., Santini, Nadia S., Marcellin, Esteban, Smith, Martin A., Nielsen, Lars K., Lovelock, Catherine E., Neilan, Brett A., Mercer, Tim R.
Published in Nature communications (06.08.2018)
Published in Nature communications (06.08.2018)
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Journal Article
Spliced synthetic genes as internal controls in RNA sequencing experiments
Hardwick, Simon A, Chen, Wendy Y, Wong, Ted, Deveson, Ira W, Blackburn, James, Andersen, Stacey B, Nielsen, Lars K, Mattick, John S, Mercer, Tim R
Published in Nature methods (01.09.2016)
Published in Nature methods (01.09.2016)
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Journal Article
The Sequencing Quality Control 2 study: establishing community standards for sequencing in precision medicine
Mercer, Tim R, Xu, Joshua, Mason, Christopher E, Tong, Weida
Published in Genome Biology (08.11.2021)
Published in Genome Biology (08.11.2021)
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Journal Article
Differentiating protein-coding and noncoding RNA: challenges and ambiguities
Dinger, Marcel E, Pang, Ken C, Mercer, Tim R, Mattick, John S
Published in PLoS computational biology (01.11.2008)
Published in PLoS computational biology (01.11.2008)
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Journal Article
Targeted sequencing for gene discovery and quantification using RNA CaptureSeq
Mercer, Tim R, Clark, Michael B, Crawford, Joanna, Brunck, Marion E, Gerhardt, Daniel J, Taft, Ryan J, Nielsen, Lars K, Dinger, Marcel E, Mattick, John S
Published in Nature protocols (01.05.2014)
Published in Nature protocols (01.05.2014)
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Journal Article