Abstract 4536: Applying immunopeptidomics and machine learning to improve neoantigen prediction for therapeutic and diagnostic use
Mellacheruvu, Datta, Phillips, Nick, Bartha, Gabor, Harris, Jason, Power, Robert, McClory, Rena, West, John, Chen, Richard, Boyle, Sean Michael
Published in Cancer research (Chicago, Ill.) (01.07.2019)
Published in Cancer research (Chicago, Ill.) (01.07.2019)
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Journal Article
Precision Neoantigen Discovery Using Large-Scale Immunopeptidomes and Composite Modeling of MHC Peptide Presentation
Pyke, Rachel Marty, Mellacheruvu, Datta, Dea, Steven, Abbott, Charles, Zhang, Simo V., Phillips, Nick A., Harris, Jason, Bartha, Gabor, Desai, Sejal, McClory, Rena, West, John, Snyder, Michael P., Chen, Richard, Boyle, Sean Michael
Published in Molecular & cellular proteomics (01.04.2023)
Published in Molecular & cellular proteomics (01.04.2023)
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Journal Article
Abstract 399: Pan-cancer survey of HLA loss of heterozygosity using a robustly validated NGS-based machine learning algorithm
Pyke, Rachel Marty, Mellacheruvu, Datta, Abbott, Charles, Dea, Steven, Levy, Eric, Zhang, Simo V., Bedi, Nikita, Colevas, A. Dimitrios, Bhave, Devayani, Chinnappa, Manju, Bartha, Gabor, Lyle, John, West, John, Snyder, Michael, Sunwoo, John, Chen, Richard, Boyle, Sean Michael
Published in Cancer research (Chicago, Ill.) (01.07.2021)
Published in Cancer research (Chicago, Ill.) (01.07.2021)
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Journal Article
Association of HLA loss of heterozygosity with allele-specific neoantigen expansion in response to immunotherapy
Pyke, Rachel Marty, Abbott, Charles, Dea, Steven, Bedi, Nikita, Colevas, A. Dimitrios, Levy, Eric, Zhang, Simo V., Snyder, Michael, Mellacheruvu, Datta, Sunwoo, John B., Chen, Richard, Boyle, Sean Michael
Published in Journal of clinical oncology (20.05.2021)
Published in Journal of clinical oncology (20.05.2021)
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Journal Article
DETECTING LOSS OF HETEROZYGOSITY IN HLA ALLELES USING MACHINE-LEARNING MODELS
ABBOTT, Charles, BOYLE, Sean, LEVY, Eric, DEA, Steven, PYKE, Rachel, CHEN, Richard, WEST, John, ZHANG, Simo, MELLACHERUVU, Datta
Year of Publication 27.10.2022
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Year of Publication 27.10.2022
Patent
Precision neoantigen discovery using large-scale immunopeptidomes and composite modeling of MHC peptide presentation
Rachel Marty Pyke, Datta Mellacheruvu, Dea, Steven, Abbott, Charles, Zhang, Simo V, Phillips, Nick A, Harris, Jason, Bartha, Gabor, Desai, Sejal, Mcclory, Rena, West, John, Snyder, Michael P, Chen, Richard, Boyle, Sean Michael
Published in bioRxiv (07.06.2021)
Published in bioRxiv (07.06.2021)
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Paper