A comparison of automatic cell identification methods for single-cell RNA sequencing data
Abdelaal, Tamim, Michielsen, Lieke, Cats, Davy, Hoogduin, Dylan, Mei, Hailiang, Reinders, Marcel J T, Mahfouz, Ahmed
Published in Genome Biology (09.09.2019)
Published in Genome Biology (09.09.2019)
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Journal Article
DNA methylation repels targeting of Arabidopsis REF6
Qiu, Qi, Mei, Hailiang, Deng, Xian, He, Kaixuan, Wu, Baixing, Yao, Qingqing, Zhang, Jixiang, Lu, Falong, Ma, Jinbiao, Cao, Xiaofeng
Published in Nature communications (02.05.2019)
Published in Nature communications (02.05.2019)
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Journal Article
Transcriptomic signatures in trophectoderm and inner cell mass of human blastocysts classified according to developmental potential, maternal age and morphology
Kai, Yoshiteru, Mei, Hailiang, Kawano, Hiroomi, Nakajima, Naotsuna, Takai, Aya, Kumon, Mami, Inoue, Azusa, Yamashita, Naoki
Published in PloS one (01.12.2022)
Published in PloS one (01.12.2022)
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Journal Article
Deregulation of JAK2 signaling underlies primary cutaneous CD8 + aggressive epidermotropic cytotoxic T-cell lymphoma
Bastidas Torres, Armando N, Cats, Davy, Out-Luiting, Jacoba J, Fanoni, Daniele, Mei, Hailiang, Venegoni, Luigia, Willemze, Rein, Vermeer, Maarten H, Berti, Emilio, Tensen, Cornelis P
Published in Haematologica (Roma) (01.03.2022)
Published in Haematologica (Roma) (01.03.2022)
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Journal Article
The respiratory virome and exacerbations in patients with chronic obstructive pulmonary disease
van Rijn, Anneloes L, van Boheemen, Sander, Sidorov, Igor, Carbo, Ellen C, Pappas, Nikos, Mei, Hailiang, Feltkamp, Mariet, Aanerud, Marianne, Bakke, Per, Claas, Eric C J, Eagan, Tomas M, Hiemstra, Pieter S, Kroes, Aloys C M, de Vries, Jutte J C
Published in PloS one (24.10.2019)
Published in PloS one (24.10.2019)
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Journal Article
Antisense oligonucleotide-mediated disruption of HTT caspase-6 cleavage site ameliorates the phenotype of YAC128 Huntington disease mice
Kuijper, Elsa C, Overzier, Maurice, Suidgeest, Ernst, Dzyubachyk, Oleh, Maguin, Cécile, Pérot, Jean-Baptiste, Flament, Julien, Ariyurek, Yavuz, Mei, Hailiang, Buijsen, Ronald A M, van der Weerd, Louise, van Roon-Mom, Willeke
Published in Neurobiology of disease (01.01.2024)
Published in Neurobiology of disease (01.01.2024)
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Journal Article
OVOL1 inhibits breast cancer cell invasion by enhancing the degradation of TGF-β type I receptor
Fan, Chuannan, Wang, Qian, van der Zon, Gerard, Ren, Jiang, Agaser, Cedrick, Slieker, Roderick C., Iyengar, Prasanna Vasudevan, Mei, Hailiang, ten Dijke, Peter
Published in Signal transduction and targeted therapy (29.04.2022)
Published in Signal transduction and targeted therapy (29.04.2022)
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Journal Article
Identification and characterization of two consistent osteoarthritis subtypes by transcriptome and clinical data integration
Coutinho de Almeida, Rodrigo, Mahfouz, Ahmed, Mei, Hailiang, Houtman, Evelyn, den Hollander, Wouter, Soul, Jamie, Suchiman, Eka, Lakenberg, Nico, Meessen, Jennifer, Huetink, Kasper, Nelissen, Rob G H H, Ramos, Yolande F M, Reinders, Marcel, Meulenbelt, Ingrid
Published in Rheumatology (Oxford, England) (02.03.2021)
Published in Rheumatology (Oxford, England) (02.03.2021)
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Journal Article
Whole-genome profiling of primary cutaneous anaplastic large cell lymphoma
Bastidas Torres, Armando N., Melchers, Rutger C., Van Grieken, Liana, Out-Luiting, Jacoba J., Mei, Hailiang, Agaser, Cedrick, Kuipers, Thomas B., Quint, Koen D., Willemze, Rein, Vermeer, Maarten H., Tensen, Cornelis P.
Published in Haematologica (Roma) (01.07.2022)
Published in Haematologica (Roma) (01.07.2022)
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Journal Article
Elucidating mechano-pathology of osteoarthritis: transcriptome-wide differences in mechanically stressed aged human cartilage explants
Houtman, Evelyn, Tuerlings, Margo, Riechelman, Janne, Suchiman, Eka H. E. D, van der Wal, Robert J. P, Nelissen, Rob G. H. H, Mei, Hailiang, Ramos, Yolande F. M, Coutinho de Almeida, Rodrigo, Meulenbelt, Ingrid
Published in Arthritis research & therapy (16.08.2021)
Published in Arthritis research & therapy (16.08.2021)
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Journal Article
Parental haplotype-specific single-cell transcriptomics reveal incomplete epigenetic reprogramming in human female germ cells
Vértesy, Ábel, Arindrarto, Wibowo, Roost, Matthias S., Reinius, Björn, Torrens-Juaneda, Vanessa, Bialecka, Monika, Moustakas, Ioannis, Ariyurek, Yavuz, Kuijk, Ewart, Mei, Hailiang, Sandberg, Rickard, van Oudenaarden, Alexander, Chuva de Sousa Lopes, Susana M.
Published in Nature communications (14.05.2018)
Published in Nature communications (14.05.2018)
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Journal Article
Single-Cell Transcriptomics Analysis of Human Small Antral Follicles
Fan, Xueying, Moustakas, Ioannis, Bialecka, Monika, Del Valle, Julieta S, Overeem, Arend W, Louwe, Leoni A, Pilgram, Gonneke S K, van der Westerlaken, Lucette A J, Mei, Hailiang, Chuva de Sousa Lopes, Susana M
Published in International journal of molecular sciences (04.11.2021)
Published in International journal of molecular sciences (04.11.2021)
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Journal Article
USP18 is an essential regulator of muscle cell differentiation and maturation
Olie, Cyriel Sebastiaan, Pinto-Fernández, Adán, Damianou, Andreas, Vendrell, Iolanda, Mei, Hailiang, den Hamer, Bianca, van der Wal, Erik, de Greef, Jessica C., Raz, Vered, Kessler, Benedikt M.
Published in Cell death & disease (31.03.2023)
Published in Cell death & disease (31.03.2023)
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Journal Article
Exacerbated inflammatory signaling underlies aberrant response to BMP9 in pulmonary arterial hypertension lung endothelial cells
Szulcek, Robert, Sanchez-Duffhues, Gonzalo, Rol, Nina, Pan, Xiaoke, Tsonaka, Roula, Dickhoff, Chris, Yung, Lai Ming, Manz, Xue D., Kurakula, Kondababu, Kiełbasa, Szymon M., Mei, Hailiang, Timens, Wim, Yu, Paul B., Bogaard, Harm-Jan, Goumans, Marie-José
Published in Angiogenesis (London) (01.11.2020)
Published in Angiogenesis (London) (01.11.2020)
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Transcriptional progression during meiotic prophase I reveals sex-specific features and X chromosome dynamics in human fetal female germline
Fan, Xueying, Moustakas, Ioannis, Torrens-Juaneda, Vanessa, Lei, Qijing, Hamer, Geert, Louwe, Leoni A, Pilgram, Gonneke S K, Szuhai, Karoly, Matorras, Roberto, Eguizabal, Cristina, Westerlaken, Lucette van der, Mei, Hailiang, Chuva de Sousa Lopes, Susana M
Published in PLoS genetics (09.09.2021)
Published in PLoS genetics (09.09.2021)
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Journal Article
Ten quick tips for building FAIR workflows
de Visser, Casper, Johansson, Lennart F, Kulkarni, Purva, Mei, Hailiang, Neerincx, Pieter, Joeri van der Velde, K, Horvatovich, Péter, van Gool, Alain J, Swertz, Morris A, Hoen, Peter A. C. 't, Niehues, Anna
Published in PLoS computational biology (28.09.2023)
Published in PLoS computational biology (28.09.2023)
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Journal Article
Comparative genomics reveals adaptive evolution of Asian tapeworm in switching to a new intermediate host
Wang, Shuai, Wang, Sen, Luo, Yingfeng, Xiao, Lihua, Luo, Xuenong, Gao, Shenghan, Dou, Yongxi, Zhang, Huangkai, Guo, Aijiang, Meng, Qingshu, Hou, Junling, Zhang, Bing, Zhang, Shaohua, Yang, Meng, Meng, Xuelian, Mei, Hailiang, Li, Hui, He, Zilong, Zhu, Xueliang, Tan, Xinyu, Zhu, Xing-quan, Yu, Jun, Cai, Jianping, Zhu, Guan, Hu, Songnian, Cai, Xuepeng
Published in Nature communications (22.09.2016)
Published in Nature communications (22.09.2016)
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Journal Article
Precise editing of methylated cytosine in Arabidopsis thaliana using a human APOBEC3Bctd-Cas9 fusion
Liu, Zhi-Hong, Tang, Shanjie, Hu, Wentao, Lv, Ruo, Mei, Hailiang, Yang, Rongxin, Song, Xianwei, Cao, Xiaofeng, Wang, Dong
Published in Science China. Life sciences (2022)
Published in Science China. Life sciences (2022)
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C/D box snoRNA SNORD113-6 guides 2′-O-methylation and protects against site-specific fragmentation of tRNALeu(TAA) in vascular remodeling
van Ingen, Eva, Engbers, Pleun A.M., Woudenberg, Tamar, van der Bent, M. Leontien, Mei, Hailiang, Wojta, Johann, Quax, Paul H.A., Nossent, A. Yaël
Published in Molecular therapy. Nucleic acids (13.12.2022)
Published in Molecular therapy. Nucleic acids (13.12.2022)
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Journal Article
PABPN1 loss-of-function causes APA-shift in oculopharyngeal muscular dystrophy
Shademan, Milad, Mei, Hailiang, van Engelen, Baziel, Ariyurek, Yavuz, Kloet, Susan, Raz, Vered
Published in HGG advances (11.04.2024)
Published in HGG advances (11.04.2024)
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