Variation Among Biosynthetic Gene Clusters, Secondary Metabolite Profiles, and Cards of Virulence Across Aspergillus Species
Steenwyk, Jacob L, Mead, Matthew E, Knowles, Sonja L, Raja, Huzefa A, Roberts, Christopher D, Bader, Oliver, Houbraken, Jos, Goldman, Gustavo H, Oberlies, Nicholas H, Rokas, Antonis
Published in Genetics (Austin) (01.10.2020)
Published in Genetics (Austin) (01.10.2020)
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Journal Article
WetA bridges cellular and chemical development in Aspergillus flavus
Wu, Ming-Yueh, Mead, Matthew E, Kim, Sun-Chang, Rokas, Antonis, Yu, Jae-Hyuk
Published in PloS one (28.06.2017)
Published in PloS one (28.06.2017)
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Journal Article
Evolutionary origin and population diversity of a cryptic hybrid pathogen
Steenwyk, Jacob L., Knowles, Sonja, Bastos, Rafael W., Balamurugan, Charu, Rinker, David, Mead, Matthew E., Roberts, Christopher D., Raja, Huzefa A., Li, Yuanning, Colabardini, Ana Cristina, de Castro, Patrícia Alves, dos Reis, Thaila Fernanda, Gumilang, Adiyantara, Almagro-Molto, María, Alanio, Alexandre, Garcia-Hermoso, Dea, Delbaje, Endrews, Pontes, Laís, Pinzan, Camila Figueiredo, Schreiber, Angélica Zaninelli, Canóvas, David, Sanchez Luperini, Rafael, Lagrou, Katrien, Torrado, Egídio, Rodrigues, Fernando, Oberlies, Nicholas H., Zhou, Xiaofan, Goldman, Gustavo H., Rokas, Antonis
Published in Nature communications (28.09.2024)
Published in Nature communications (28.09.2024)
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Journal Article
Genomic and Phenotypic Heterogeneity of Clinical Isolates of the Human Pathogens Aspergillus fumigatus, Aspergillus lentulus, and Aspergillus fumigatiaffinis
dos Santos, Renato A. C., Steenwyk, Jacob L., Rivero-Menendez, Olga, Mead, Matthew E., Silva, Lilian P., Bastos, Rafael W., Alastruey-Izquierdo, Ana, Goldman, Gustavo H., Rokas, Antonis
Published in Frontiers in genetics (12.05.2020)
Published in Frontiers in genetics (12.05.2020)
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Journal Article
Transcriptomic, Protein-DNA Interaction, and Metabolomic Studies of VosA, VelB, and WetA in Aspergillus nidulans Asexual Spores
Wu, Ming-Yueh, Mead, Matthew E, Lee, Mi-Kyung, Neuhaus, George F, Adpressa, Donovon A, Martien, Julia I, Son, Ye-Eun, Moon, Heungyun, Amador-Noguez, Daniel, Han, Kap-Hoon, Rokas, Antonis, Loesgen, Sandra, Yu, Jae-Hyuk, Park, Hee-Soo
Published in mBio (09.02.2021)
Published in mBio (09.02.2021)
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Journal Article
Examination of Genome-Wide Ortholog Variation in Clinical and Environmental Isolates of the Fungal Pathogen Aspergillus fumigatus
Horta, Maria Augusta C, Steenwyk, Jacob L, Mead, Matthew E, Dos Santos, Luciano H Braz, Zhao, Shu, Gibbons, John G, Marcet-Houben, Marina, Gabaldón, Toni, Rokas, Antonis, Goldman, Gustavo H
Published in mBio (30.08.2022)
Published in mBio (30.08.2022)
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Journal Article
Mapping the Fungal Battlefield: Using in situ Chemistry and Deletion Mutants to Monitor Interspecific Chemical Interactions Between Fungi
Knowles, Sonja L, Raja, Huzefa A, Wright, Allison J, Lee, Ann Marie L, Caesar, Lindsay K, Cech, Nadja B, Mead, Matthew E, Steenwyk, Jacob L, Ries, Laure N A, Goldman, Gustavo H, Rokas, Antonis, Oberlies, Nicholas H
Published in Frontiers in microbiology (19.02.2019)
Published in Frontiers in microbiology (19.02.2019)
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Journal Article
Diterpene cyclases and the nature of the isoprene fold
Cao, Rong, Zhang, Yonghui, Mann, Francis M., Huang, Cancan, Mukkamala, Dushyant, Hudock, Michael P., Mead, Matthew E., Prisic, Sladjana, Wang, Ke, Lin, Fu-Yang, Chang, Ting-Kai, Peters, Reuben J., Oldfield, Eric
Published in Proteins, structure, function, and bioinformatics (15.08.2010)
Published in Proteins, structure, function, and bioinformatics (15.08.2010)
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Journal Article
Evident and latent plasticity across the rice diterpene synthase family with potential implications for the evolution of diterpenoid metabolism in the cereals
Morrone, Dana, Hillwig, Matthew L, Mead, Matthew E, Lowry, Luke, Fulton, D Bruce, Peters, Reuben J
Published in Biochemical journal (01.05.2011)
Published in Biochemical journal (01.05.2011)
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Journal Article
Genomic and Phenotypic Analysis of COVID-19-Associated Pulmonary Aspergillosis Isolates of Aspergillus fumigatus
Steenwyk, Jacob L, Mead, Matthew E, de Castro, Patrícia Alves, Valero, Clara, Damasio, André, Dos Santos, Renato A C, Labella, Abigail L, Li, Yuanning, Knowles, Sonja L, Raja, Huzefa A, Oberlies, Nicholas H, Zhou, Xiaofan, Cornely, Oliver A, Fuchs, Frieder, Koehler, Philipp, Goldman, Gustavo H, Rokas, Antonis
Published in Microbiology spectrum (03.09.2021)
Published in Microbiology spectrum (03.09.2021)
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Journal Article
Transcriptional control of sexual development in Cryptococcus neoformans
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Journal Article
Book Review
Examining Signatures of Natural Selection in Antifungal Resistance Genes Across Aspergillus Fungi
dos Santos, Renato Augusto Corrêa, Mead, Matthew E., Steenwyk, Jacob L., Rivero-Menéndez, Olga, Alastruey-Izquierdo, Ana, Goldman, Gustavo Henrique, Rokas, Antonis
Published in Frontiers in fungal biology (10.09.2021)
Published in Frontiers in fungal biology (10.09.2021)
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Journal Article
Biosynthetic gene clusters and the evolution of fungal chemodiversity
Rokas, Antonis, Mead, Matthew E, Steenwyk, Jacob L, Raja, Huzefa A, Oberlies, Nicholas H
Published in Natural product reports (01.07.2020)
Published in Natural product reports (01.07.2020)
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Journal Article
BioKIT: a versatile toolkit for processing and analyzing diverse types of sequence data
Steenwyk, Jacob L, Buida, Thomas J, Gonçalves, Carla, Goltz, Dayna C, Morales, Grace, Mead, Matthew E, LaBella, Abigail L, Chavez, Christina M, Schmitz, Jonathan E, Hadjifrangiskou, Maria, Li, Yuanning, Rokas, Antonis
Published in Genetics (Austin) (04.07.2022)
Published in Genetics (Austin) (04.07.2022)
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Journal Article
An evolutionary genomic approach reveals both conserved and species-specific genetic elements related to human disease in closely related Aspergillus fungi
Mead, Matthew E, Steenwyk, Jacob L, Silva, Lilian P, de Castro, Patrícia A, Saeed, Nauman, Hillmann, Falk, Goldman, Gustavo H, Rokas, Antonis
Published in Genetics (Austin) (24.06.2021)
Published in Genetics (Austin) (24.06.2021)
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Journal Article
Recurrent Loss of abaA, a Master Regulator of Asexual Development in Filamentous Fungi, Correlates with Changes in Genomic and Morphological Traits
Mead, Matthew E, Borowsky, Alexander T, Joehnk, Bastian, Steenwyk, Jacob L, Shen, Xing-Xing, Sil, Anita, Rokas, Antonis
Published in Genome biology and evolution (01.07.2020)
Published in Genome biology and evolution (01.07.2020)
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Journal Article
Gliotoxin, a Known Virulence Factor in the Major Human Pathogen Aspergillus fumigatus, Is Also Biosynthesized by Its Nonpathogenic Relative Aspergillus fischeri
Knowles, Sonja L, Mead, Matthew E, Silva, Lilian Pereira, Raja, Huzefa A, Steenwyk, Jacob L, Goldman, Gustavo H, Oberlies, Nicholas H, Rokas, Antonis
Published in mBio (11.02.2020)
Published in mBio (11.02.2020)
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Journal Article