Brain Cell Type Specific Gene Expression and Co-expression Network Architectures
McKenzie, Andrew T, Wang, Minghui, Hauberg, Mads E, Fullard, John F, Kozlenkov, Alexey, Keenan, Alexandra, Hurd, Yasmin L, Dracheva, Stella, Casaccia, Patrizia, Roussos, Panos, Zhang, Bin
Published in Scientific reports (11.06.2018)
Published in Scientific reports (11.06.2018)
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Journal Article
Multiscale network modeling of oligodendrocytes reveals molecular components of myelin dysregulation in Alzheimer's disease
McKenzie, Andrew T, Moyon, Sarah, Wang, Minghui, Katsyv, Igor, Song, Won-Min, Zhou, Xianxiao, Dammer, Eric B, Duong, Duc M, Aaker, Joshua, Zhao, Yongzhong, Beckmann, Noam, Wang, Pei, Zhu, Jun, Lah, James J, Seyfried, Nicholas T, Levey, Allan I, Katsel, Pavel, Haroutunian, Vahram, Schadt, Eric E, Popko, Brian, Casaccia, Patrizia, Zhang, Bin
Published in Molecular neurodegeneration (06.11.2017)
Published in Molecular neurodegeneration (06.11.2017)
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Journal Article
Perfusion fixation in brain banking: a systematic review
McFadden, Whitney C, Walsh, Hadley, Richter, Felix, Soudant, Céline, Bryce, Clare H, Hof, Patrick R, Fowkes, Mary, Crary, John F, McKenzie, Andrew T
Published in Acta neuropathologica communications (05.09.2019)
Published in Acta neuropathologica communications (05.09.2019)
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Journal Article
Author Correction: Brain Cell Type Specific Gene Expression and Co-expression Network Architectures
McKenzie, Andrew T., Wang, Minghui, Hauberg, Mads E., Fullard, John F., Kozlenkov, Alexey, Keenan, Alexandra, Hurd, Yasmin L., Dracheva, Stella, Casaccia, Patrizia, Roussos, Panos, Zhang, Bin
Published in Scientific reports (24.09.2021)
Published in Scientific reports (24.09.2021)
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Journal Article
Artificial intelligence-derived neurofibrillary tangle burden is associated with antemortem cognitive impairment
Marx, Gabriel A, Koenigsberg, Daniel G, McKenzie, Andrew T, Kauffman, Justin, Hanson, Russell W, Whitney, Kristen, Signaevsky, Maxim, Prastawa, Marcel, Iida, Megan A, White, 3rd, Charles L, Walker, Jamie M, Richardson, Timothy E, Koll, John, Fernandez, Gerardo, Zeineh, Jack, Cordon-Cardo, Carlos, Crary, John F, Farrell, Kurt
Published in Acta neuropathologica communications (31.10.2022)
Published in Acta neuropathologica communications (31.10.2022)
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Journal Article
DGCA: A comprehensive R package for Differential Gene Correlation Analysis
McKenzie, Andrew T, Katsyv, Igor, Song, Won-Min, Wang, Minghui, Zhang, Bin
Published in BMC systems biology (15.11.2016)
Published in BMC systems biology (15.11.2016)
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Journal Article
Histopathologic brain age estimation via multiple instance learning
Marx, Gabriel A., Kauffman, Justin, McKenzie, Andrew T., Koenigsberg, Daniel G., McMillan, Cory T., Morgello, Susan, Karlovich, Esma, Insausti, Ricardo, Richardson, Timothy E., Walker, Jamie M., White, Charles L., Babrowicz, Bergan M., Shen, Li, McKee, Ann C., Stein, Thor D., Farrell, Kurt, Crary, John F.
Published in Acta neuropathologica (01.12.2023)
Published in Acta neuropathologica (01.12.2023)
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Journal Article
Spatial proteomics of hippocampal subfield‐specific pathology in Alzheimer's disease and primary age‐related tauopathy
Walker, Jamie M., Orr, Miranda E., Orr, Timothy C., Thorn, Emma L., Christie, Thomas D., Yokoda, Raquel T., Vij, Meenakshi, Ehrenberg, Alexander J., Marx, Gabriel A., McKenzie, Andrew T., Kauffman, Justin, Selmanovic, Enna, Wisniewski, Thomas, Drummond, Eleanor, White, Charles L., Crary, John F., Farrell, Kurt, Kautz, Tiffany F., Daoud, Elena V., Richardson, Timothy E.
Published in Alzheimer's & dementia (01.02.2024)
Published in Alzheimer's & dementia (01.02.2024)
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Journal Article
Structural brain preservation: a potential bridge to future medical technologies
McKenzie, Andrew T., Zeleznikow-Johnston, Ariel, Sparks, Jordan S., Nnadi, Oge, Smart, John, Wiley, Keith, Cerullo, Michael A., de Wolf, Aschwin, Minerva, Francesca, Risco, Ramón, Church, George M., de Magalhães, João Pedro, Kendziorra, Emil F.
Published in Frontiers in medical technology (09.09.2024)
Published in Frontiers in medical technology (09.09.2024)
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Journal Article
Fluid preservation in brain banking: a review
McKenzie, Andrew T, Nnadi, Oge, Slagell, Kat D, Thorn, Emma L, Farrell, Kurt, Crary, John F
Published in Free Neuropathology (01.01.2024)
Published in Free Neuropathology (01.01.2024)
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Journal Article
Transcriptome analysis identifies Bacillus anthracis genes that respond to CO2 through an AtxA-dependent mechanism
McKenzie, Andrew T, Pomerantsev, Andrei P, Sastalla, Inka, Martens, Craig, Ricklefs, Stacy M, Virtaneva, Kimmo, Anzick, Sarah, Porcella, Stephen F, Leppla, Stephen H
Published in BMC genomics (25.03.2014)
Published in BMC genomics (25.03.2014)
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Journal Article
Ex situ perfusion fixation for brain banking: a technical report
McKenzie, Andrew T, Woodoff-Leith, Emma, Dangoor, Diana, Cervera, Alessandra, Ressler, Hadley Walsh, Whitney, Kristen, Dams-O'Connor, Kristen, Wu, Zhuhao, Hillman, Elizabeth M C, Seifert, Alan C, Crary, John F
Published in Free Neuropathology (2022)
Published in Free Neuropathology (2022)
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Journal Article
A further application of the active time model to multiple concurrent variable-interval schedules
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Journal Article
Conference Proceeding
Predictors of Successful Brain Aging: An Autopsy Study
Iida, Megan A, Marx, Gabe, Kauffman, Justin, McKenzie, Andrew T, Koenigsberg, Daniel, Richardson, Timothy E., Walker, Jamie M., White, Charles, Farrell, Kurt W., Crary, John F.
Published in Alzheimer's & dementia (01.12.2023)
Published in Alzheimer's & dementia (01.12.2023)
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Journal Article
Prediction of cognitive impairment in morphologically‐ and immunohistochemically‐stained whole slide images reveals white matter alterations
McKenzie, Andrew T, Marx, Gabriel A., Koenigsberg, Daniel, Sawyer, Mary, Iida, Megan A, Walker, Jamie M., Richardson, Timothy E., Campanella, Gabriele, Attems, Johannes, McKee, Ann C., Stein, Thor D., Fuchs, Thomas J, III, Charles White, Farrell, Kurt W., Crary, John F.
Published in Alzheimer's & dementia (01.06.2023)
Published in Alzheimer's & dementia (01.06.2023)
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Journal Article
Interpretable deep learning of myelin histopathology in age-related cognitive impairment
McKenzie, Andrew T, Marx, Gabriel A, Koenigsberg, Daniel, Sawyer, Mary, Iida, Megan A, Walker, Jamie M, Richardson, Timothy E, Campanella, Gabriele, Attems, Johannes, McKee, Ann C, Stein, Thor D, Fuchs, Thomas J, White, 3rd, Charles L, Farrell, Kurt, Crary, John F
Published in Acta neuropathologica communications (21.09.2022)
Published in Acta neuropathologica communications (21.09.2022)
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Journal Article
Transcriptome analysis identifies Bacillus anthracis genes that respond to CO2through an AtxA-dependent mechanism
McKenzie, Andrew T, Pomerantsev, Andrei P, Sastalla, Inka, Martens, Craig, Ricklefs, Stacy M, Virtaneva, Kimmo, Anzick, Sarah, Porcella, Stephen F, Leppla, Stephen H
Published in BMC genomics (25.03.2014)
Published in BMC genomics (25.03.2014)
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Journal Article
Transcriptome analysis identifies Bacillus anthracis genes that respond to CO sub(2) through an AtxA-dependent mechanism
McKenzie, Andrew T, Pomerantsev, Andrei P, Sastalla, Inka, Martens, Craig, Ricklefs, Stacy M, Virtaneva, Kimmo, Anzick, Sarah, Porcella, Stephen F, Leppla, Stephen H
Published in BMC genomics (01.01.2014)
Published in BMC genomics (01.01.2014)
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Journal Article