Systematic evaluation of differential splicing tools for RNA-seq studies
Mehmood, Arfa, Laiho, Asta, Venäläinen, Mikko S, McGlinchey, Aidan J, Wang, Ning, Elo, Laura L
Published in Briefings in bioinformatics (01.12.2020)
Published in Briefings in bioinformatics (01.12.2020)
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Journal Article
Exposure to environmental contaminants is associated with altered hepatic lipid metabolism in non-alcoholic fatty liver disease
Sen, Partho, Qadri, Sami, Luukkonen, Panu K., Ragnarsdottir, Oddny, McGlinchey, Aidan, Jäntti, Sirkku, Juuti, Anne, Arola, Johanna, Schlezinger, Jennifer J., Webster, Thomas F., Orešič, Matej, Yki-Järvinen, Hannele, Hyötyläinen, Tuulia
Published in Journal of hepatology (01.02.2022)
Published in Journal of hepatology (01.02.2022)
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Journal Article
Deep learning meets metabolomics: a methodological perspective
Sen, Partho, Lamichhane, Santosh, Mathema, Vivek B, McGlinchey, Aidan, Dickens, Alex M, Khoomrung, Sakda, Orešič, Matej
Published in Briefings in bioinformatics (22.03.2021)
Published in Briefings in bioinformatics (22.03.2021)
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Journal Article
Prenatal exposure to perfluoroalkyl substances modulates neonatal serum phospholipids, increasing risk of type 1 diabetes
McGlinchey, Aidan, Sinioja, Tim, Lamichhane, Santosh, Sen, Partho, Bodin, Johanna, Siljander, Heli, Dickens, Alex M., Geng, Dawei, Carlsson, Cecilia, Duberg, Daniel, Ilonen, Jorma, Virtanen, Suvi M., Dirven, Hubert, Berntsen, Hanne Friis, Zimmer, Karin, Nygaard, Unni C., Orešič, Matej, Knip, Mikael, Hyötyläinen, Tuulia
Published in Environment international (01.10.2020)
Published in Environment international (01.10.2020)
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Journal Article
Systems biology approaches to study lipidomes in health and disease
Alves, Marina Amaral, Lamichhane, Santosh, Dickens, Alex, McGlinchey, Aidan, Ribeiro, Henrique Caracho, Sen, Partho, Wei, Fang, Hyötyläinen, Tuulia, Orešič, Matej
Published in Biochimica et biophysica acta. Molecular and cell biology of lipids (01.02.2021)
Published in Biochimica et biophysica acta. Molecular and cell biology of lipids (01.02.2021)
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Journal Article
Metabolic signatures across the full spectrum of non-alcoholic fatty liver disease
McGlinchey, Aidan J., Govaere, Olivier, Geng, Dawei, Ratziu, Vlad, Allison, Michael, Bousier, Jerome, Petta, Salvatore, de Oliviera, Claudia, Bugianesi, Elisabetta, Schattenberg, Jörn M., Daly, Ann K., Hyötyläinen, Tuulia, Anstee, Quentin M., Orešič, Matej
Published in JHEP reports (01.05.2022)
Published in JHEP reports (01.05.2022)
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Journal Article
Perfluoroalkyl substances are increased in patients with late-onset ulcerative colitis and induce intestinal barrier defects ex vivo in murine intestinal tissue
Fart, Frida, Salihović, Samira, McGlinchey, Aidan, Gareau, Melanie G., Orešič, Matej, Halfvarson, Jonas, Hyötyläinen, Tuulia, Schoultz, Ida
Published in Scandinavian journal of gastroenterology (02.11.2021)
Published in Scandinavian journal of gastroenterology (02.11.2021)
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Journal Article
Potential Transdiagnostic Lipid Mediators of Inflammatory Activity in Individuals With Serious Mental Illness
Hylén, Ulrika, McGlinchey, Aidan, Orešič, Matej, Bejerot, Susanne, Humble, Mats B, Särndahl, Eva, Hyötyläinen, Tuulia, Eklund, Daniel
Published in Frontiers in psychiatry (26.11.2021)
Published in Frontiers in psychiatry (26.11.2021)
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Journal Article
Metabolism of human liver on a genome scale in non-alcoholic fatty liver disease
Sen, Parho, Govaere, Olivier, McGlinchey, Aidan, Ratziu, Vlad, Bugianesi, Elisabetta, Schattenberg, Jörn M., Allison, Michael, Cockell, Simon, Daly, Ann K, Hyötyläinen, Tuulia, Anstee, Quentin, Orešič, Matej
Published in Journal of hepatology (01.08.2020)
Published in Journal of hepatology (01.08.2020)
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Journal Article
Quantitative modeling of human liver reveals dysregulation of glycosphingolipid pathways in nonalcoholic fatty liver disease
Sen, Partho, Govaere, Olivier, Sinioja, Tim, McGlinchey, Aidan, Geng, Dawei, Ratziu, Vlad, Bugianesi, Elisabetta, Schattenberg, Jörn M., Vidal-Puig, Antonio, Allison, Michael, Cockell, Simon, Daly, Ann K., Hyötyläinen, Tuulia, Anstee, Quentin M., Orešič, Matej
Published in iScience (16.09.2022)
Published in iScience (16.09.2022)
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Journal Article
In utero exposures to perfluoroalkyl substances and the human fetal liver metabolome in Scotland: a cross-sectional study
Hyötyläinen, Tuulia, McGlinchey, Aidan, Salihovic, Samira, Schubert, Antonia, Douglas, Alex, Hay, David C, O'Shaughnessy, Peter J, Iredale, John P, Shaw, Sophie, Fowler, Paul A, Orešič, Matej
Published in The Lancet. Planetary health (01.01.2024)
Published in The Lancet. Planetary health (01.01.2024)
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Journal Article
Reprogramming diminishes retention of Mycobacterium leprae in Schwann cells and elevates bacterial transfer property to fibroblasts [version 3; peer review: 3 approved]
Masaki, Toshihiro, McGlinchey, Aidan, Tomlinson, Simon R, Qu, Jinrong, Rambukkana, Anura
Published in F1000 research (14.11.2013)
Published in F1000 research (14.11.2013)
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Journal Article
In Vivo Availability of Cannabinoid 1 Receptor Levels in Patients With First-Episode Psychosis
Borgan, Faith, Laurikainen, Heikki, Veronese, Mattia, Marques, Tiago Reis, Haaparanta-Solin, Merja, Solin, Olof, Dahoun, Tarik, Rogdaki, Maria, Salokangas, Raimo Kr, Karukivi, Max, Di Forti, Marta, Turkheimer, Federico, Hietala, Jarmo, Howes, Oliver
Published in JAMA psychiatry (Chicago, Ill.) (01.10.2019)
Published in JAMA psychiatry (Chicago, Ill.) (01.10.2019)
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Journal Article
The Metabolomics of Non-Alcoholic Fatty Liver Disease: Of Networks and Biomarkers
McGlinchey, Aidan J, Geng, Dawei, Govaere, Olivier, Ratziu, Vlad, Bugianesi, Elisabetta, Schattenberg, Joern M., Daley, Ann, Hyötyläinen, Tuulia, Anstee, Quentin, Oresic, Matej
Published in Journal of hepatology (2021)
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Published in Journal of hepatology (2021)
Journal Article
SAT040 - Metabolism of human liver on a genome scale in non-alcoholic fatty liver disease
Sen, Parho, Govaere, Olivier, McGlinchey, Aidan, Ratziu, Vlad, Bugianesi, Elisabetta, Schattenberg, Jörn M., Allison, Michael, Cockell, Simon, Daly, Ann K, Hyötyläinen, Tuulia, Anstee, Quentin, Orešič, Matej
Published in Journal of hepatology (01.08.2020)
Published in Journal of hepatology (01.08.2020)
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Journal Article
FRI076 - Metabolomics approaches to identify biomarkers of non-alcoholic fatty liver disease
McGlinchey, Aidan, Geng, Dawei, Govaere, Olivier, Ratziu, Vlad, Bugianesi, Elisabetta, Schattenberg, Jörn M., Daly, Ann K, Hyötyläinen, Tuulia, Anstee, Quentin, Orešič, Matej
Published in Journal of hepatology (01.08.2020)
Published in Journal of hepatology (01.08.2020)
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Journal Article
Metabolomics approaches to identify biomarkers of non-alcoholic fatty liver disease
McGlinchey, Aidan, Geng, Dawei, Govaere, Olivier, Ratziu, Vlad, Bugianesi, Elisabetta, Schattenberg, Jörn M., Daly, Ann K, Hyötyläinen, Tuulia, Anstee, Quentin, Orešič, Matej
Published in Journal of hepatology (01.08.2020)
Published in Journal of hepatology (01.08.2020)
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Journal Article