Characterization of the core rumen microbiome in cattle during transition from forage to concentrate as well as during and after an acidotic challenge
Petri, Renee M, Schwaiger, Tyler, Penner, Greg B, Beauchemin, Karen A, Forster, Robert J, McKinnon, John J, McAllister, Tim A
Published in PloS one (31.12.2013)
Published in PloS one (31.12.2013)
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Journal Article
Invited review: Current enteric methane mitigation options
Beauchemin, Karen A., Ungerfeld, Emilio M., Abdalla, Adibe L., Alvarez, Clementina, Arndt, Claudia, Becquet, Philippe, Benchaar, Chaouki, Berndt, Alexandre, Mauricio, Rogerio M., McAllister, Tim A., Oyhantçabal, Walter, Salami, Saheed A., Shalloo, Laurence, Sun, Yan, Tricarico, Juan, Uwizeye, Aimable, De Camillis, Camillo, Bernoux, Martial, Robinson, Timothy, Kebreab, Ermias
Published in Journal of dairy science (01.12.2022)
Published in Journal of dairy science (01.12.2022)
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Journal Article
Biochar is colonized by select arbuscular mycorrhizal fungi in agricultural soils
Neuberger, Patrick, Romero, Carlos, Kim, Keunbae, Hao, Xiying, A. McAllister, Tim, Ngo, Skyler, Li, Chunli, Gorzelak, Monika A.
Published in Mycorrhiza (01.06.2024)
Published in Mycorrhiza (01.06.2024)
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Journal Article
Pathogens of Bovine Respiratory Disease in North American Feedlots Conferring Multidrug Resistance via Integrative Conjugative Elements
Klima, Cassidy L, Zaheer, Rahat, Cook, Shaun R, Booker, Calvin W, Hendrick, Steve, Alexander, Trevor W, McAllister, Tim A
Published in Journal of Clinical Microbiology (01.02.2014)
Published in Journal of Clinical Microbiology (01.02.2014)
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Journal Article
Influence of Season and Feedlot Location on Prevalence and Virulence Factors of Seven Serogroups of Escherichia coli in Feces of Western-Canadian Slaughter Cattle
Stanford, Kim, Johnson, Roger P, Alexander, Trevor W, McAllister, Tim A, Reuter, Tim
Published in PloS one (02.08.2016)
Published in PloS one (02.08.2016)
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Journal Article
A review of the resistome within the digestive tract of livestock
Ma, Tao, McAllister, Tim A, Guan, Le Luo
Published in Journal of animal science and biotechnology (11.11.2021)
Published in Journal of animal science and biotechnology (11.11.2021)
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Journal Article
Assessment of different enrichment methods revealed the optimal approach to identify bovine circRnas
Wang, Yixin, Wang, Jian, Gruninger, Robert J, McAllister, Tim A, Li, Mingzhou, Guan, Le Luo
Published in RNA biology (31.12.2024)
Published in RNA biology (31.12.2024)
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Journal Article
Condensed Tannins Affect Bacterial and Fungal Microbiomes and Mycotoxin Production during Ensiling and upon Aerobic Exposure
Peng, Kai, Jin, Long, Niu, Yan D, Huang, Qianqian, McAllister, Tim A, Yang, Hee Eun, Denise, Hubert, Xu, Zhongjun, Acharya, Surya, Wang, Shunxi, Wang, Yuxi
Published in Applied and environmental microbiology (01.03.2018)
Published in Applied and environmental microbiology (01.03.2018)
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Journal Article
Comparative genomics of Enterococcus spp. isolated from bovine feces
Beukers, Alicia G, Zaheer, Rahat, Goji, Noriko, Amoako, Kingsley K, Chaves, Alexandre V, Ward, Michael P, McAllister, Tim A
Published in BMC microbiology (08.03.2017)
Published in BMC microbiology (08.03.2017)
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Journal Article
Effect of continuous or intermittent feeding of ergot contaminated grain in a mash or pelleted form on the performance and health of feedlot beef steers
Reynolds, Matthew R, Stanford, Kim, Meléndez, Daniela M, Schwartzkopf-Genswein, Karen S, McAllister, Tim A, Blakley, Barry R, McKinnon, John J, Ribeiro, Gabriel O
Published in Journal of animal science (03.01.2024)
Published in Journal of animal science (03.01.2024)
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Journal Article
Comparative genomics of multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants
Sanderson, Haley, Ortega-Polo, Rodrigo, Zaheer, Rahat, Goji, Noriko, Amoako, Kingsley K, Brown, R Stephen, Majury, Anna, Liss, Steven N, McAllister, Tim A
Published in BMC microbiology (24.01.2020)
Published in BMC microbiology (24.01.2020)
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Journal Article
Functional screening for triclosan resistance in a wastewater metagenome and isolates of Escherichia coli and Enterococcus spp. from a large Canadian healthcare region
Cameron, Andrew, Barbieri, Ruth, Read, Ron, Church, Deirdre, Adator, Emelia H, Zaheer, Rahat, McAllister, Tim A
Published in PloS one (24.01.2019)
Published in PloS one (24.01.2019)
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Journal Article
Repeated inoculation of cattle rumen with bison rumen contents alters the rumen microbiome and improves nitrogen digestibility in cattle
Ribeiro, Gabriel O., Oss, Daniela B., He, Zhixiong, Gruninger, Robert J., Elekwachi, Chijioke, Forster, Robert J., Yang, WenZhu, Beauchemin, Karen A., McAllister, Tim A.
Published in Scientific reports (28.04.2017)
Published in Scientific reports (28.04.2017)
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Journal Article
Emerging Variants of the Integrative and Conjugant Element ICEMh1 in Livestock Pathogens: Structural Insights, Potential Host Range, and Implications for Bacterial Fitness and Antimicrobial Therapy
Cameron, Andrew, Zaheer, Rahat, McAllister, Tim A.
Published in Frontiers in microbiology (12.11.2019)
Published in Frontiers in microbiology (12.11.2019)
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Journal Article
Efficacy of Individual Bacteriophages Does Not Predict Efficacy of Bacteriophage Cocktails for Control of Escherichia coli O157
Niu, Yan D, Liu, Hui, Du, Hechao, Meng, Ruiqiang, Sayed Mahmoud, El, Wang, Guihua, McAllister, Tim A, Stanford, Kim
Published in Frontiers in microbiology (24.02.2021)
Published in Frontiers in microbiology (24.02.2021)
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Journal Article
Ecology and molecular targets of hypermutation in the global microbiome
Roux, Simon, Paul, Blair G., Bagby, Sarah C., Nayfach, Stephen, Allen, Michelle A., Attwood, Graeme, Cavicchioli, Ricardo, Chistoserdova, Ludmila, Gruninger, Robert J., Hallam, Steven J., Hernandez, Maria E., Hess, Matthias, Liu, Wen-Tso, McAllister, Tim A., O’Malley, Michelle A., Peng, Xuefeng, Rich, Virginia I., Saleska, Scott R., Eloe-Fadrosh, Emiley A.
Published in Nature communications (24.05.2021)
Published in Nature communications (24.05.2021)
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Journal Article
Snapshot of the eukaryotic gene expression in muskoxen rumen--a metatranscriptomic approach
Qi, Meng, Wang, Pan, O'Toole, Nicholas, Barboza, Perry S, Ungerfeld, Emilio, Leigh, Mary Beth, Selinger, L Brent, Butler, Greg, Tsang, Adrian, McAllister, Tim A, Forster, Robert J
Published in PloS one (31.05.2011)
Published in PloS one (31.05.2011)
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Journal Article