PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph
Gautreau, Guillaume, Bazin, Adelme, Gachet, Mathieu, Planel, Rémi, Burlot, Laura, Dubois, Mathieu, Perrin, Amandine, Médigue, Claudine, Calteau, Alexandra, Cruveiller, Stéphane, Matias, Catherine, Ambroise, Christophe, Rocha, Eduardo P C, Vallenet, David
Published in PLoS computational biology (19.03.2020)
Published in PLoS computational biology (19.03.2020)
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Nine quick tips for analyzing network data
Miele, Vincent, Matias, Catherine, Robin, Stéphane, Dray, Stéphane
Published in PLoS computational biology (01.12.2019)
Published in PLoS computational biology (01.12.2019)
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Correction: PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph
Gautreau, Guillaume, Bazin, Adelme, Gachet, Mathieu, Planel, Rémi, Burlot, Laura, Dubois, Mathieu, Perrin, Amandine, Médigue, Claudine, Calteau, Alexandra, Cruveiller, Stéphane, Matias, Catherine, Ambroise, Christophe, Rocha, Eduardo P C, Vallenet, David
Published in PLoS computational biology (10.12.2021)
Published in PLoS computational biology (10.12.2021)
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An appraisal of graph embeddings for comparing trophic network architectures
Botella, Christophe, Dray, Stéphane, Matias, Catherine, Miele, Vincent, Thuiller, Wilfried
Published in Methods in ecology and evolution (01.01.2022)
Published in Methods in ecology and evolution (01.01.2022)
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A time warping approach to multiple sequence alignment
Arribas-Gil, Ana, Matias, Catherine
Published in Statistical applications in genetics and molecular biology (25.04.2017)
Published in Statistical applications in genetics and molecular biology (25.04.2017)
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SIMoNe: Statistical Inference for MOdular NEtworks
Chiquet, Julien, Smith, Alexander, Grasseau, Gilles, Matias, Catherine, Ambroise, Christophe
Published in Bioinformatics (01.02.2009)
Published in Bioinformatics (01.02.2009)
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Model-based clustering in simple hypergraphs through a stochastic blockmodel
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