Stanford Microarray Database: implementation of new analysis tools and open source release of software
Demeter, Janos, Beauheim, Catherine, Gollub, Jeremy, Hernandez-Boussard, Tina, Jin, Heng, Maier, Donald, Matese, John C, Nitzberg, Michael, Wymore, Farrell, Zachariah, Zachariah K, Brown, Patrick O, Sherlock, Gavin, Ball, Catherine A
Published in Nucleic acids research (01.01.2007)
Published in Nucleic acids research (01.01.2007)
Get full text
Journal Article
Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data
Ball, C A, Jin, H, Sherlock, G, Weng, S, Matese, J C, Andrada, R, Binkley, G, Dolinski, K, Dwight, S S, Harris, M A, Issel-Tarver, L, Schroeder, M, Botstein, D, Cherry, J M
Published in Nucleic acids research (01.01.2001)
Published in Nucleic acids research (01.01.2001)
Get full text
Journal Article
Gene Expression Patterns of Breast Carcinomas Distinguish Tumor Subclasses with Clinical Implications
Sørlie, Therese, Perou, Charles M., Tibshirani, Robert, Aas, Turid, Geisler, Stephanie, Johnsen, Hilde, Hastie, Trevor, Eisen, Michael B., van de Rijn, Matt, Jeffrey, Stefanie S., Thorsen, Thor, Quist, Hanne, Matese, John C., Brown, Patrick O., Botstein, David, Lønning, Per Eystein, Børresen-Dale, Anne-Lise
Published in Proceedings of the National Academy of Sciences - PNAS (11.09.2001)
Published in Proceedings of the National Academy of Sciences - PNAS (11.09.2001)
Get full text
Journal Article
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data
Gaasterland, Terry, Taylor, Ronald, Glenisson, Patrick, Ball, Catherine A, Kim, Irene F, Robinson, Alan, Stoeckert, Chris, Matese, John C, Parkinson, Helen, Sarkans, Ugis, Vingron, Martin, Brazma, Alvis, Sherlock, Gavin, Vilo, Jaak, Stewart, Jason, Ansorge, Wilhelm, Markowitz, Victor, Quackenbush, John, Hingamp, Pascal, Holstege, Frank C.P, Spellman, Paul, Aach, John, Schulze-Kremer, Steffen, Causton, Helen C
Published in Nature genetics (01.12.2001)
Published in Nature genetics (01.12.2001)
Get full text
Journal Article
SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data
Diehn, Maximilian, Sherlock, Gavin, Binkley, Gail, Jin, Heng, Matese, John C., Hernandez-Boussard, Tina, Rees, Christian A., Cherry, J. Michael, Botstein, David, Brown, Patrick O., Alizadeh, Ash A.
Published in Nucleic acids research (01.01.2003)
Published in Nucleic acids research (01.01.2003)
Get full text
Journal Article
The Stanford Microarray Database: data access and quality assessment tools
Gollub, Jeremy, Ball, Catherine A., Binkley, Gail, Demeter, Janos, Finkelstein, David B., Hebert, Joan M., Hernandez-Boussard, Tina, Jin, Heng, Kaloper, Miroslava, Matese, John C., Schroeder, Mark, Brown, Patrick O., Botstein, David, Sherlock, Gavin
Published in Nucleic acids research (01.01.2003)
Published in Nucleic acids research (01.01.2003)
Get full text
Journal Article
The Stanford Microarray Database accommodates additional microarray platforms and data formats
Ball, Catherine A., Awad, Ihab A. B., Demeter, Janos, Gollub, Jeremy, Hebert, Joan M., Hernandez-Boussard, Tina, Jin, Heng, Matese, John C., Nitzberg, Michael, Wymore, Farrell, Zachariah, Zachariah K., Brown, Patrick O., Sherlock, Gavin
Published in Nucleic acids research (01.01.2005)
Published in Nucleic acids research (01.01.2005)
Get full text
Journal Article
The Stanford Microarray Database
Sherlock, G, Hernandez-Boussard, T, Kasarskis, A, Binkley, G, Matese, J C, Dwight, S S, Kaloper, M, Weng, S, Jin, H, Ball, C A, Eisen, M B, Spellman, P T, Brown, P O, Botstein, D, Cherry, J M
Published in Nucleic acids research (01.01.2001)
Published in Nucleic acids research (01.01.2001)
Get full text
Journal Article
Gene Ontology: tool for the unification of biology
Botstein, David, Cherry, J. Michael, Ashburner, Michael, Ball, Catherine A, Blake, Judith A, Butler, Heather, Davis, Allan P, Dolinski, Kara, Dwight, Selina S, Eppig, Janan T, Harris, Midori A, Hill, David P, Issel-Tarver, Laurie, Kasarskis, Andrew, Lewis, Suzanna, Matese, John C, Richardson, Joel E, Ringwald, Martin, Rubin, Gerald M, Sherlock, Gavin
Published in Nature genetics (01.05.2000)
Published in Nature genetics (01.05.2000)
Get full text
Journal Article
Cell adhesion and cell signaling at gastrulation in the sea urchin
McClay, D.R., Miller, J.R., Logan, C.Y., Hertzler, P.L., Bachman, E.S., Matese, J.C., Sherwood, D.R., Armstrong, N.A.
Published in Theriogenology (01.12.1995)
Published in Theriogenology (01.12.1995)
Get full text
Journal Article
Submission of microarray data to public repositories
Ball, Catherine A, Brazma, Alvis, Causton, Helen, Chervitz, Steve, Edgar, Ron, Hingamp, Pascal, Matese, John C, Parkinson, Helen, Quackenbush, John, Ringwald, Martin, Sansone, Susanna-Assunta, Sherlock, Gavin, Spellman, Paul, Stoeckert, Chris, Tateno, Yoshio, Taylor, Ronald, White, Joseph, Winegarden, Neil
Published in PLoS biology (01.09.2004)
Published in PLoS biology (01.09.2004)
Get full text
Journal Article
Comparative Genomic Hybridizations of Entamoeba Strains Reveal Unique Genetic Fingerprints That Correlate with Virulence
Shah, Preetam H, MacFarlane, Ryan C, Bhattacharya, Dhruva, Matese, John C, Demeter, Janos, Stroup, Suzanne E, Singh, Upinder
Published in Eukaryotic Cell (01.03.2005)
Published in Eukaryotic Cell (01.03.2005)
Get full text
Journal Article
Microarray Data Standards: An Open Letter
Ball, Catherine, Brazma, Alvis, Causton, Helen, Chervitz, Steve, Edgar, Ron, Hingamp, Pascal, Matese, John C., Parkinson, Helen, Quackenbush, John, Ringwald, Martin, Sansone, Susanna-Assunta, Sherlock, Gavin, Spellman, Paul, Stoeckert, Christian, Tateno, Yoshio, Taylor, Ronald, White, Joseph, Winegarden, Neil
Published in Environmental health perspectives (01.08.2004)
Published in Environmental health perspectives (01.08.2004)
Get full text
Journal Article
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
Ashburner, M, Ball, C A, Blake, J A, Botstein, D, Butler, H, Cherry, J M, Davis, A P, Dolinski, K, Dwight, S S, Eppig, J T, Harris, M A, Hill, D P, Issel-Tarver, L, Kasarskis, A, Lewis, S, Matese, J C, Richardson, J E, Ringwald, M, Rubin, G M, Sherlock, G
Published in Nature genetics (01.05.2000)
Published in Nature genetics (01.05.2000)
Get full text
Journal Article
GeneXplorer: an interactive web application for microarray data visualization and analysis
Rees, Christian A, Demeter, Janos, Matese, John C, Botstein, David, Sherlock, Gavin
Published in BMC bioinformatics (01.10.2004)
Published in BMC bioinformatics (01.10.2004)
Get full text
Journal Article
An open letter on microarray data from the MGED Society
Microarray Gene Expression Data Mged Society
Published in Microbiology (Society for General Microbiology) (01.11.2004)
Published in Microbiology (Society for General Microbiology) (01.11.2004)
Get full text
Journal Article