Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics
Giacomoni, Franck, Le Corguillé, Gildas, Monsoor, Misharl, Landi, Marion, Pericard, Pierre, Pétéra, Mélanie, Duperier, Christophe, Tremblay-Franco, Marie, Martin, Jean-François, Jacob, Daniel, Goulitquer, Sophie, Thévenot, Etienne A, Caron, Christophe
Published in Bioinformatics (01.05.2015)
Published in Bioinformatics (01.05.2015)
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Journal Article
Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing
Gilles, André, Meglécz, Emese, Pech, Nicolas, Ferreira, Stéphanie, Malausa, Thibaut, Martin, Jean-François
Published in BMC genomics (19.05.2011)
Published in BMC genomics (19.05.2011)
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Journal Article
Hesperidin contributes to the vascular protective effects of orange juice: a randomized crossover study in healthy volunteers
MORAND, Christine, DUBRAY, Claude, MILENKOVIC, Dragan, LIOGER, Delphine, MARTIN, Jean François, SCALBERT, Augustin, MAZUR, Andrzej
Published in The American journal of clinical nutrition (2011)
Published in The American journal of clinical nutrition (2011)
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Journal Article
Mass Spectrometry-based Metabolomics for the Discovery of Biomarkers of Fruit and Vegetable Intake: Citrus Fruit as a Case Study
Pujos-Guillot, Estelle, Hubert, Jane, Martin, Jean-François, Lyan, Bernard, Quintana, Mercedes, Claude, Sylvain, Chabanas, Bruno, Rothwell, Joseph A, Bennetau-Pelissero, Catherine, Scalbert, Augustin, Comte, Blandine, Hercberg, Serge, Morand, Christine, Galan, Pilar, Manach, Claudine
Published in Journal of proteome research (05.04.2013)
Published in Journal of proteome research (05.04.2013)
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Journal Article
A from‐benchtop‐to‐desktop workflow for validating HTS data and for taxonomic identification in diet metabarcoding studies
Corse, Emmanuel, Meglécz, Emese, Archambaud, Gaït, Ardisson, Morgane, Martin, Jean‐François, Tougard, Christelle, Chappaz, Rémi, Dubut, Vincent
Published in Molecular ecology resources (01.11.2017)
Published in Molecular ecology resources (01.11.2017)
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Journal Article
Codiversification of gastrointestinal microbiota and phylogeny in passerines is not explained by ecological divergence
Kropáčková, Lucie, Těšický, Martin, Albrecht, Tomáš, Kubovčiak, Jan, Čížková, Dagmar, Tomášek, Oldřich, Martin, Jean‐François, Bobek, Lukáš, Králová, Tereza, Procházka, Petr, Kreisinger, Jakub
Published in Molecular ecology (01.10.2017)
Published in Molecular ecology (01.10.2017)
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Journal Article
Lactose and Fructo-oligosaccharides Increase Visceral Sensitivity in Mice via Glycation Processes, Increasing Mast Cell Density in Colonic Mucosa
Kamphuis, Jasper B.J., Guiard, Bruno, Leveque, Mathilde, Olier, Maiwenn, Jouanin, Isabelle, Yvon, Sophie, Tondereau, Valerie, Rivière, Pauline, Guéraud, Françoise, Chevolleau, Sylvie, Noguer-Meireles, Maria-Helena, Martin, Jean- François, Debrauwer, Laurent, Eutamène, Helene, Theodorou, Vassilia
Published in Gastroenterology (New York, N.Y. 1943) (01.02.2020)
Published in Gastroenterology (New York, N.Y. 1943) (01.02.2020)
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Journal Article
New biomarkers of coffee consumption identified by the non-targeted metabolomic profiling of cohort study subjects
Rothwell, Joseph A, Fillâtre, Yoann, Martin, Jean-François, Lyan, Bernard, Pujos-Guillot, Estelle, Fezeu, Leopold, Hercberg, Serge, Comte, Blandine, Galan, Pilar, Touvier, Mathilde, Manach, Claudine
Published in PloS one (01.04.2014)
Published in PloS one (01.04.2014)
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Journal Article
Metabolic Effects of a Chronic Dietary Exposure to a Low-Dose Pesticide Cocktail in Mice: Sexual Dimorphism and Role of the Constitutive Androstane Receptor
Lukowicz, Céline, Ellero-Simatos, Sandrine, Régnier, Marion, Polizzi, Arnaud, Lasserre, Frédéric, Montagner, Alexandra, Lippi, Yannick, Jamin, Emilien L, Martin, Jean-François, Naylies, Claire, Canlet, Cécile, Debrauwer, Laurent, Bertrand-Michel, Justine, Al Saati, Talal, Théodorou, Vassilia, Loiseau, Nicolas, Mselli-Lakhal, Laïla, Guillou, Hervé, Gamet-Payrastre, Laurence
Published in Environmental health perspectives (01.06.2018)
Published in Environmental health perspectives (01.06.2018)
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Journal Article
An innovative approach combining metabarcoding and ecological interaction networks for selecting candidate biological control agents
Ollivier, Mélodie, Lesieur, Vincent, Tavoillot, Johannes, Bénetière, Fanny, Tixier, Marie‐Stéphane, Martin, Jean‐François
Published in The Journal of applied ecology (01.12.2021)
Published in The Journal of applied ecology (01.12.2021)
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Journal Article
Global Profiling of Toxicologically Relevant Metabolites in Urine: Case Study of Reactive Aldehydes
Jamin, Emilien L, Costantino, Robin, Mervant, Loïc, Martin, Jean-François, Jouanin, Isabelle, Blas-Y-Estrada, Florence, Guéraud, Françoise, Debrauwer, Laurent
Published in Analytical chemistry (Washington) (21.01.2020)
Published in Analytical chemistry (Washington) (21.01.2020)
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Journal Article
High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries
MALAUSA, THIBAUT, GILLES, ANDRÉ, MEGLÉCZ, EMESE, BLANQUART, HÉLÈNE, DUTHOY, STÉPHANIE, COSTEDOAT, CAROLINE, DUBUT, VINCENT, PECH, NICOLAS, CASTAGNONE-SERENO, PHILIPPE, DÉLYE, CHRISTOPHE, FEAU, NICOLAS, FREY, PASCAL, GAUTHIER, PHILIPPE, GUILLEMAUD, THOMAS, HAZARD, LAURENT, LE CORRE, VALÉRIE, LUNG-ESCARMANT, BRIGITTE, MALÉ, PIERRE-JEAN G., FERREIRA, STÉPHANIE, MARTIN, JEAN-FRANÇOIS
Published in Molecular ecology resources (01.07.2011)
Published in Molecular ecology resources (01.07.2011)
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Journal Article
Challenges and advances for transcriptome assembly in non-model species
Ungaro, Arnaud, Pech, Nicolas, Martin, Jean-François, McCairns, R J Scott, Mévy, Jean-Philippe, Chappaz, Rémi, Gilles, André
Published in PloS one (20.09.2017)
Published in PloS one (20.09.2017)
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Journal Article
Cover cropping alters the diet of arthropods in a banana plantation: a metabarcoding approach
Mollot, Gregory, Duyck, Pierre-François, Lefeuvre, Pierre, Lescourret, Françoise, Martin, Jean-François, Piry, Sylvain, Canard, Elsa, Tixier, Philippe
Published in PloS one (01.04.2014)
Published in PloS one (01.04.2014)
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Journal Article
How being synanthropic affects the gut bacteriome and mycobiome: comparison of two mouse species with contrasting ecologies
Bendová, Barbora, Piálek, Jaroslav, Ďureje, Ľudovít, Schmiedová, Lucie, Čížková, Dagmar, Martin, Jean-Francois, Kreisinger, Jakub
Published in BMC microbiology (06.07.2020)
Published in BMC microbiology (06.07.2020)
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Journal Article
Variation between the oral and faecal microbiota in a free-living passerine bird, the great tit (Parus major)
Kropáčková, Lucie, Pechmanová, Hana, Vinkler, Michal, Svobodová, Jana, Velová, Hana, Těšičký, Martin, Martin, Jean-François, Kreisinger, Jakub
Published in PloS one (29.06.2017)
Published in PloS one (29.06.2017)
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Journal Article
Urinary Metabolome Analysis Reveals Potential Microbiota Alteration and Electrophilic Burden Induced by High Red Meat Diet: Results from the French NutriNet‐Santé Cohort and an In Vivo Intervention Study in Rats
Mervant, Loïc, Tremblay‐Franco, Marie, Olier, Maïwenn, Jamin, Emilien, Martin, Jean‐Francois, Trouilh, Lidwine, Buisson, Charline, Naud, Nathalie, Maslo, Claire, Héliès‐Toussaint, Cécile, Fouché, Edwin, Kesse‐Guyot, Emmanuelle, Hercberg, Serge, Galan, Pilar, Deschasaux‐Tanguy, Mélanie, Touvier, Mathilde, Pierre, Fabrice, Debrauwer, Laurent, Guéraud, Francoise
Published in Molecular nutrition & food research (01.03.2023)
Published in Molecular nutrition & food research (01.03.2023)
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Journal Article
Phylogeography of the Wheat Stem Sawfly, Cephus cinctus Norton (Hymenoptera: Cephidae): Implications for Pest Management
Lesieur, Vincent, Martin, Jean-François, Weaver, David K, Hoelmer, Kim A, Smith, David R, Morrill, Wendell L, Kadiri, Nassera, Peairs, Frank B, Cockrell, Darren M, Randolph, Terri L, Waters, Debra K, Bon, Marie-Claude
Published in PloS one (13.12.2016)
Published in PloS one (13.12.2016)
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Journal Article
Time Course of Molecular and Metabolic Events in the Development of Insulin Resistance in Fructose-Fed Rats
Polakof, Sergio, Dardevet, Dominique, Lyan, Bernard, Mosoni, Laurent, Gatineau, Eva, Martin, Jean-François, Pujos-Guillot, Estelle, Mazur, Andrzej, Comte, Blandine
Published in Journal of proteome research (03.06.2016)
Published in Journal of proteome research (03.06.2016)
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