Crosstalk and ultrasensitivity in protein degradation pathways
Mallela, Abhishek, Nariya, Maulik K, Deeds, Eric J
Published in PLoS computational biology (28.12.2020)
Published in PLoS computational biology (28.12.2020)
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Journal Article
Impacts of Vaccination and Severe Acute Respiratory Syndrome Coronavirus 2 Variants Alpha and Delta on Coronavirus Disease 2019 Transmission Dynamics in Four Metropolitan Areas of the United States
Mallela, Abhishek, Chen, Ye, Lin, Yen Ting, Miller, Ely F., Neumann, Jacob, He, Zhili, Nelson, Kathryn E., Posner, Richard G., Hlavacek, William S.
Published in Bulletin of mathematical biology (01.03.2024)
Published in Bulletin of mathematical biology (01.03.2024)
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Journal Article
Daily Forecasting of Regional Epidemics of Coronavirus Disease with Bayesian Uncertainty Quantification, United States
Lin, Yen Ting, Neumann, Jacob, Miller, Ely F, Posner, Richard G, Mallela, Abhishek, Safta, Cosmin, Ray, Jaideep, Thakur, Gautam, Chinthavali, Supriya, Hlavacek, William S
Published in Emerging infectious diseases (01.03.2021)
Published in Emerging infectious diseases (01.03.2021)
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Journal Article
Bayesian Inference of State-Level COVID-19 Basic Reproduction Numbers across the United States
Mallela, Abhishek, Neumann, Jacob, Miller, Ely F, Chen, Ye, Posner, Richard G, Lin, Yen Ting, Hlavacek, William S
Published in Viruses (15.01.2022)
Published in Viruses (15.01.2022)
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Quantification of early nonpharmaceutical interventions aimed at slowing transmission of Coronavirus Disease 2019 in the Navajo Nation and surrounding states (Arizona, Colorado, New Mexico, and Utah)
Miller, Ely F, Neumann, Jacob, Chen, Ye, Mallela, Abhishek, Lin, Yen Ting, Hlavacek, William S, Posner, Richard G
Published in PLOS global public health (21.06.2023)
Published in PLOS global public health (21.06.2023)
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Journal Article
HIV–TB co-infection treatment: Modeling and optimal control theory perspectives
Mallela, Abhishek, Lenhart, Suzanne, Vaidya, Naveen K.
Published in Journal of computational and applied mathematics (01.12.2016)
Published in Journal of computational and applied mathematics (01.12.2016)
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Journal Article
Robustness and the evolution of length control strategies in the T3SS and flagellar hook
Nariya, Maulik K., Mallela, Abhishek, Shi, Jack J., Deeds, Eric J.
Published in Biophysical journal (07.09.2021)
Published in Biophysical journal (07.09.2021)
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Journal Article
Implementation of a practical Markov chain Monte Carlo sampling algorithm in PyBioNetFit
Neumann, Jacob, Lin, Yen Ting, Mallela, Abhishek, Miller, Ely F, Colvin, Joshua, Duprat, Abell T, Chen, Ye, Hlavacek, William S, Posner, Richard G
Published in Bioinformatics (04.03.2022)
Published in Bioinformatics (04.03.2022)
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Journal Article
Evaluation of FluSight influenza forecasting in the 2021–22 and 2022–23 seasons with a new target laboratory-confirmed influenza hospitalizations
Mathis, Sarabeth M., Webber, Alexander E., León, Tomás M., Murray, Erin L., Sun, Monica, White, Lauren A., Brooks, Logan C., Green, Alden, Hu, Addison J., Rosenfeld, Roni, Tibshirani, Ryan J., McDonald, Daniel J., Kandula, Sasikiran, Pei, Sen, Yaari, Rami, Yamana, Teresa K., Shaman, Jeffrey, Gururajan, Gautham, Kamarthi, Harshavardhan, Prakash, B. Aditya, Raman, Rishi, Zhao, Zhiyuan, Rodríguez, Alexander, Meiyappan, Akilan, Omar, Shalina, Baccam, Prasith, Gurung, Heidi L., Suchoski, Brad T., Stage, Steve A., Ajelli, Marco, Kummer, Allisandra G., Litvinova, Maria, Ventura, Paulo C., Wadsworth, Spencer, Niemi, Jarad, Carcelen, Erica, Loo, Sara L., McKee, Clifton D., Sato, Koji, Smith, Claire, Truelove, Shaun, Lemaitre, Joseph C., Lessler, Justin, McAndrew, Thomas, Ye, Wenxuan, Bosse, Nikos, Hlavacek, William S., Lin, Yen Ting, Mallela, Abhishek, Gibson, Graham C., Chen, Ye, Lamm, Shelby M., Lee, Jaechoul, Perofsky, Amanda C., Clemente, Leonardo, Lu, Fred, Meyer, Austin G., Santillana, Mauricio, Chinazzi, Matteo, Davis, Jessica T., Mu, Kunpeng, Pastore y Piontti, Ana, Vespignani, Alessandro, Xiong, Xinyue, Ben-Nun, Michal, Riley, Pete, Turtle, James, Hulme-Lowe, Chis, Jessa, Shakeel, Turner, Stephen D., Williams, Desiree, Basu, Avranil, Drake, John M., Fox, Spencer J., Suez, Ehsan, Cojocaru, Monica G., Thommes, Edward W., Cramer, Estee Y., Gerding, Aaron, Stark, Ariane, Ray, Evan L., Reich, Nicholas G., Wang, Yijin, Zorn, Martha W., Aawar, Majd Al, Srivastava, Ajitesh, Meyers, Lauren A., Adiga, Aniruddha, Hurt, Benjamin, Kaur, Gursharn, Lewis, Bryan L., Marathe, Madhav, Venkatramanan, Srinivasan, Butler, Patrick, Farabow, Andrew, Ramakrishnan, Naren, Muralidhar, Nikhil, Reed, Carrie, Biggerstaff, Matthew, Borchering, Rebecca K.
Published in Nature communications (26.07.2024)
Published in Nature communications (26.07.2024)
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Journal Article
Title evaluation of FluSight influenza forecasting in the 2021-22 and 2022-23 seasons with a new target laboratory-confirmed influenza hospitalizations
Mathis, Sarabeth M, Webber, Alexander E, León, Tomás M, Murray, Erin L, Sun, Monica, White, Lauren A, Brooks, Logan C, Green, Alden, Hu, Addison J, Rosenfeld, Roni, Tibshirani, Ryan J, McDonald, Daniel J, Kandula, Sasikiran, Pei, Sen, Yaari, Rami, Yamana, Teresa K, Shaman, Jeffrey, Gururajan, Gautham, Kamarthi, Harshavardhan, Prakash, B Aditya, Raman, Rishi, Zhao, Zhiyuan, Meiyappan, Akilan, Omar, Shalina, Baccam, Prasith, Gurung, Heidi L, Suchoski, Brad T, Stage, Steve A, Ajelli, Marco, Kummer, Allisandra G, Litvinova, Maria, Ventura, Paulo C, Wadsworth, Spencer, Carcelen, Erica, Loo, Sara L, McKee, Clifton D, Sato, Koji, Smith, Claire, Truelove, Shaun, Jung, Sung-Mok, Lemaitre, Joseph C, Lessler, Justin, McAndrew, Thomas, Ye, Wenxuan, Bosse, Nikos, Hlavacek, William S, Lin, Yen Ting, Mallela, Abhishek, Gibson, Graham C, Chen, Ye, Lamm, Shelby M, Lee, Jaechoul, Perofsky, Amanda C, Viboud, Cécile, Clemente, Leonardo, Lu, Fred, Meyer, Austin G, Santillana, Mauricio, Davis, Jessica T, Mu, Kunpeng, Pastore Y Piontti, Ana, Vespignani, Alessandro, Xiong, Xinyue, Ben-Nun, Michal, Riley, Pete, Turtle, James, Hulme-Lowe, Chis, Nagraj, V P, Turner, Stephen D, Williams, Desiree, Basu, Avranil, Drake, John M, Fox, Spencer J, Suez, Ehsan, Cojocaru, Monica G, Thommes, Edward W, Cramer, Estee Y, Gerding, Aaron, Stark, Ariane, Ray, Evan L, Reich, Nicholas G, Shandross, Li, Wattanachit, Nutcha, Wang, Yijin, Aawar, Majd Al, Srivastava, Ajitesh, Meyers, Lauren A, Adiga, Aniruddha, Hurt, Benjamin, Kaur, Gursharn, Lewis, Bryan L, Marathe, Madhav, Venkatramanan, Srinivasan, Butler, Patrick, Farabow, Andrew, Ramakrishnan, Naren, Muralidhar, Nikhil, Reed, Carrie, Biggerstaff, Matthew, Borchering, Rebecca K
Published in Nature communications (26.07.2024)
Published in Nature communications (26.07.2024)
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Journal Article
The United States COVID-19 Forecast Hub dataset
Cramer, Estee Y, Huang, Yuxin, Wang, Yijin, Ray, Evan L, Cornell, Matthew, Bracher, Johannes, Brennen, Andrea, Rivadeneira, Alvaro J Castro, Gerding, Aaron, House, Katie, Jayawardena, Dasuni, Kanji, Abdul Hannan, Khandelwal, Ayush, Le, Khoa, Mody, Vidhi, Mody, Vrushti, Niemi, Jarad, Stark, Ariane, Shah, Apurv, Wattanchit, Nutcha, Zorn, Martha W, Reich, Nicholas G
Published in Scientific data (01.08.2022)
Published in Scientific data (01.08.2022)
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Journal Article
Quantification of early nonpharmaceutical interventions aimed at slowing transmission of Coronavirus Disease 2019 in the Navajo Nation and surrounding states (Arizona, Colorado, New Mexico, and Utah)
Ely F Miller, Jacob Neumann, Ye Chen, Abhishek Mallela, Yen Ting Lin, William S Hlavacek, Richard G Posner
Published in PLOS global public health (01.01.2023)
Published in PLOS global public health (01.01.2023)
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Journal Article
Quantification of early nonpharmaceutical interventions aimed at slowing transmission of Coronavirus Disease 2019 in the Navajo Nation and surrounding states (Arizona, Colorado, New Mexico, and Utah)
Miller, Ely F, Neumann, Jacob, Chen, Ye, Mallela, Abhishek, Lin, Yen Ting, Hlavacek, William S, Posner, Richard G
Published in medRxiv : the preprint server for health sciences (16.02.2023)
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Published in medRxiv : the preprint server for health sciences (16.02.2023)
Journal Article
Impacts of vaccination and Severe Acute Respiratory Syndrome Coronavirus 2 variants Alpha and Delta on Coronavirus Disease 2019 transmission dynamics in four metropolitan areas of the United States
Mallela, Abhishek, Chen, Ye, Lin, Yen Ting, Miller, Ely F, Neumann, Jacob, He, Zhili, Nelson, Kathryn E, Posner, Richard G, Hlavacek, William S
Published in medRxiv : the preprint server for health sciences (08.01.2024)
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Published in medRxiv : the preprint server for health sciences (08.01.2024)
Journal Article
Implementation of a practical Markov chain Monte Carlo sampling algorithm in PyBioNetFit
Neumann, Jacob, Lin, Yen Ting, Mallela, Abhishek, Miller, Ely F, Colvin, Joshua, Abell T Duprat1, Chen, Ye, Hlavacek, William S, Posner, Richard G
Published in arXiv.org (29.09.2021)
Published in arXiv.org (29.09.2021)
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