SETDB1 fuels the lung cancer phenotype by modulating epigenome, 3D genome organization and chromatin mechanical properties
Zakharova, Vlada V, Magnitov, Mikhail D, Del Maestro, Laurence, Ulianov, Sergey V, Glentis, Alexandros, Uyanik, Burhan, Williart, Alice, Karpukhina, Anna, Demidov, Oleg, Joliot, Veronique, Vassetzky, Yegor S, Mège, René-Marc, Piel, Matthieu, Razin, Sergey V, Ait-Si-Ali, Slimane
Published in Nucleic acids research (06.05.2022)
Published in Nucleic acids research (06.05.2022)
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Journal Article
Suppression of liquid-liquid phase separation by 1,6-hexanediol partially compromises the 3D genome organization in living cells
Ulianov, Sergey V, Velichko, Artem K, Magnitov, Mikhail D, Luzhin, Artem V, Golov, Arkadiy K, Ovsyannikova, Natalia, Kireev, Igor I, Gavrikov, Alexey S, Mishin, Alexander S, Garaev, Azat K, Tyakht, Alexander V, Gavrilov, Alexey A, Kantidze, Omar L, Razin, Sergey V
Published in Nucleic acids research (11.10.2021)
Published in Nucleic acids research (11.10.2021)
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Journal Article
RedChIP identifies noncoding RNAs associated with genomic sites occupied by Polycomb and CTCF proteins
Gavrilov, Alexey A, Sultanov, Rinat I, Magnitov, Mikhail D, Galitsyna, Aleksandra A, Dashinimaev, Erdem B, Lieberman Aiden, Erez, Razin, Sergey V
Published in Proceedings of the National Academy of Sciences - PNAS (04.01.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (04.01.2022)
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Journal Article
Proximity-dependent biotin labelling reveals CP190 as an EcR/Usp molecular partner
Mazina, Marina Yu, Ziganshin, Rustam H, Magnitov, Mikhail D, Golovnin, Anton K, Vorobyeva, Nadezhda E
Published in Scientific reports (16.03.2020)
Published in Scientific reports (16.03.2020)
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Journal Article
An automated protocol for modelling peptide substrates to proteases
Ochoa, Rodrigo, Magnitov, Mikhail, Laskowski, Roman A, Cossio, Pilar, Thornton, Janet M
Published in BMC bioinformatics (29.12.2020)
Published in BMC bioinformatics (29.12.2020)
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Journal Article
Benchmark of software tools for prokaryotic chromosomal interaction domain identification
Magnitov, Mikhail D, Kuznetsova, Veronika S, Ulianov, Sergey V, Razin, Sergey V, Tyakht, Alexander V
Published in Bioinformatics (01.11.2020)
Published in Bioinformatics (01.11.2020)
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Journal Article
Studying RNA–DNA interactome by Red-C identifies noncoding RNAs associated with various chromatin types and reveals transcription dynamics
Gavrilov, Alexey A, Zharikova, Anastasiya A, Galitsyna, Aleksandra A, Luzhin, Artem V, Rubanova, Natalia M, Golov, Arkadiy K, Petrova, Nadezhda V, Logacheva, Maria D, Kantidze, Omar L, Ulianov, Sergey V, Magnitov, Mikhail D, Mironov, Andrey A, Razin, Sergey V
Published in Nucleic acids research (09.07.2020)
Published in Nucleic acids research (09.07.2020)
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Journal Article
FACT maintains nucleosomes during transcription and stem cell viability in adult mice
Goswami, Imon, Sandlesh, Poorva, Stablewski, Aimee, Toshkov, Ilya, Safina, Alfiya F, Magnitov, Mikhail, Wang, Jianmin, Gurova, Katerina
Published in EMBO reports (05.04.2022)
Published in EMBO reports (05.04.2022)
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Journal Article
T‐cell‐derived Hodgkin lymphoma has motility characteristics intermediate between Hodgkin and anaplastic large cell lymphoma
Zakharova, Vlada, Magnitov, Mikhail, del Maestro, Laurence, Ulianov, Sergey, Glentis, Alexandros, Uyanik, Burhan, Williart, Alice, Karpukhina, Anna, Demidov, Oleg, Joliot, Veronique, Vassetzky, Yegor S, Mège, René-Marc, Piel, Matthieu, Razin, Sergey V, Ait-Si-Ali, Slimane
Published in Journal of cellular and molecular medicine (01.06.2022)
Published in Journal of cellular and molecular medicine (01.06.2022)
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Journal Article
SETDB1 Fuels the Lung Cancer Phenotype by Modulating Epigenome, 3D Genome Organization and Chromatin Mechanical Properties
Zakharova, Vlada, Magnitov, Mikhail, Del-Maestro, Laurence, Ulianov, Sergey, Glentis, Alexandros, Ulyanik, Burhan, Williart, Alice, Karpukhina, Anna, Demidov, Oleg, Joliot, Veronique, Vassetzky, Yegor, Mege, Rene-Marc V, Piel, Matthieu, Razin, Sergey, Ait-Si-Ali, Slimane
Published in bioRxiv (06.09.2021)
Published in bioRxiv (06.09.2021)
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Paper
Suppression of liquid-liquid phase separation by 1,6-hexanediol partially compromises the 3D genome organization in living cells
Ulianov, Sergey V, Velichko, Artem K, Magnitov, Mikhail D, Luzhin, Artem V, Golov, Arkadiy K, Ovsyannikova, Natalia, Kireev, Igor I, Tyakht, Alexander V, Gavrilov, Alexey A, Kantidze, Omar L, Razin, Sergey V
Published in bioRxiv (19.05.2020)
Published in bioRxiv (19.05.2020)
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Paper
FACT-mediated maintenance of chromatin integrity during transcription is essential for viability of mammalian stem cells
Goswami, Imon, Sandlesh, Poorva, Stablewski, Aimee, Safina, Alfiya, Toshkov, Ilya, Magnitov, Mikhail, Wang, Jianmin, Gurova, Katerina
Published in bioRxiv (03.12.2021)
Published in bioRxiv (03.12.2021)
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Paper
Studying RNA#8211;DNA interactome by Red-C identifies noncoding RNAs associated with repressed chromatin compartment and reveals transcription dynamics
Gavrilov, Alexey A, Zharikova, Anastasiya A, Galitsyna, Aleksandra A, Luzhin, Artem V, Rubanova, Natalia M, Golov, Arkadiy K, Petrova, Nadezhda V, Logacheva, Maria D, Kantidze, Omar L, Ulianov, Sergey V, Magnitov, Mikhail D, Mironov, Andrey A, Razin, Sergey V
Published in bioRxiv (02.12.2019)
Published in bioRxiv (02.12.2019)
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