Genome-resolved metagenomics reveals role of iron metabolism in drought-induced rhizosphere microbiome dynamics
Xu, Ling, Dong, Zhaobin, Chiniquy, Dawn, Pierroz, Grady, Deng, Siwen, Gao, Cheng, Diamond, Spencer, Simmons, Tuesday, Wipf, Heidi M.-L., Caddell, Daniel, Varoquaux, Nelle, Madera, Mary A., Hutmacher, Robert, Deutschbauer, Adam, Dahlberg, Jeffery A., Guerinot, Mary Lou, Purdom, Elizabeth, Banfield, Jillian F., Taylor, John W., Lemaux, Peggy G., Coleman-Derr, Devin
Published in Nature communications (28.05.2021)
Published in Nature communications (28.05.2021)
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Journal Article
Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria
Xu, Ling, Naylor, Dan, Dong, Zhaobin, Simmons, Tuesday, Pierroz, Grady, Hixson, Kim K., Kim, Young-Mo, Zink, ErikaM, Engbrecht, Kristin M., Wang, Yi, Gao, Cheng, DeGraaf, Stephanie, Madera, Mary A., Sievert, Julie A., Hollingsworth, Joy, Birdseye, Devon, Scheller, Henrik V., Hutmacher, Robert, Dahlberg, Jeffery, Jansson, Christer, Taylor, John W., Lemaux, Peggy G., Coleman-Derr, Devin
Published in Proceedings of the National Academy of Sciences - PNAS (01.05.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (01.05.2018)
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Journal Article
Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
Gao, Cheng, Xu, Ling, Montoya, Liliam, Madera, Mary, Hollingsworth, Joy, Chen, Liang, Purdom, Elizabeth, Singan, Vasanth, Vogel, John, Hutmacher, Robert B., Dahlberg, Jeffery A., Coleman-Derr, Devin, Lemaux, Peggy G., Taylor, John W.
Published in Nature communications (05.07.2022)
Published in Nature communications (05.07.2022)
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Journal Article
Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
Gao, Cheng, Montoya, Liliam, Xu, Ling, Madera, Mary, Hollingsworth, Joy, Purdom, Elizabeth, Singan, Vasanth, Vogel, John, Hutmacher, Robert B., Dahlberg, Jeffery A., Coleman-Derr, Devin, Lemaux, Peggy G., Taylor, John W.
Published in Nature communications (07.01.2020)
Published in Nature communications (07.01.2020)
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Journal Article
Strong succession in arbuscular mycorrhizal fungal communities
Gao, Cheng, Montoya, Liliam, Xu, Ling, Madera, Mary, Hollingsworth, Joy, Purdom, Elizabeth, Hutmacher, Robert B., Dahlberg, Jeffery A., Coleman-Derr, Devin, Lemaux, Peggy G., Taylor, John W.
Published in The ISME Journal (01.01.2019)
Published in The ISME Journal (01.01.2019)
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Journal Article
Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses
Varoquaux, Nelle, Cole, Benjamin, Gao, Cheng, Pierroz, Grady, Baker, Christopher R., Patel, Dhruv, Madera, Mary, Jeffers, Tim, Hollingsworth, Joy, Sievert, Julie, Yoshinaga, Yuko, Owiti, Judith A., Singan, Vasanth R., DeGraaf, Stephanie, Xu, Ling, Blow, Matthew J., Harrison, Maria J., Visel, Axel, Jansson, Christer, Niyogi, Krishna K., Hutmacher, Robert, Coleman-Derr, Devin, O’Malley, Ronan C., Taylor, John W., Dahlberg, Jeffery, Vogel, John P., Lemaux, Peggy G., Purdom, Elizabeth
Published in Proceedings of the National Academy of Sciences - PNAS (26.12.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (26.12.2019)
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Journal Article
Cell Wall Compositions of Sorghum bicolor Leaves and Roots Remain Relatively Constant Under Drought Conditions
Scavuzzo-Duggan, Tess, Varoquaux, Nelle, Madera, Mary, Vogel, John P., Dahlberg, Jeffery, Hutmacher, Robert, Belcher, Michael, Ortega, Jasmine, Coleman-Derr, Devin, Lemaux, Peggy, Purdom, Elizabeth, Scheller, Henrik V.
Published in Frontiers in plant science (12.11.2021)
Published in Frontiers in plant science (12.11.2021)
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Journal Article
Top-down mass spectrometry of histone modifications in sorghum reveals potential epigenetic markers for drought acclimation
Zhou, Mowei, Malhan, Neha, Ahkami, Amir H., Engbrecht, Kristin, Myers, Gabriel, Dahlberg, Jeffery, Hollingsworth, Joy, Sievert, Julie A., Hutmacher, Robert, Madera, Mary, Lemaux, Peggy G., Hixson, Kim K., Jansson, Christer, Paša-Tolić, Ljiljana
Published in Methods (San Diego, Calif.) (01.12.2020)
Published in Methods (San Diego, Calif.) (01.12.2020)
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Journal Article
Top-down mass spectrometry of histone modifications in sorghum reveals potential epigenetic markers for drought acclimation
Zhou, Mowei, Malhan, Neha, Ahkami, Amir H., Engbrecht, Kristin, Myers, Gabriel, Dahlberg, Jeffery, Hollingsworth, Joy, Sievert, Julie A., Hutmacher, Robert, Madera, Mary, Lemaux, Peggy G., Hixson, Kim K., Jansson, Christer, Paša-Tolić, Ljiljana
Published in Methods (San Diego, Calif.) (23.10.2019)
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Published in Methods (San Diego, Calif.) (23.10.2019)
Journal Article
Strong succession in arbuscular mycorrhizal fungal communities
Gao, Cheng, Montoya, Liliam, Xu, Ling, Madera, Mary, Hollingsworth, Joy, Purdom, Elizabeth, Hutmacher, Robert B., Dahlberg, Jeffery A., Coleman-Derr, Devin, Lemaux, Peggy G., Taylor, John W.
Published in The ISME Journal (31.08.2018)
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Published in The ISME Journal (31.08.2018)
Journal Article
Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria
Xu, Ling, Naylor, Dan, Dong, Zhaobin, Simmons, Tuesday, Pierroz, Grady, Hixson, Kim K., Kim, Young-Mo, Zink, Erika M., Engbrecht, Kristin M., Wang, Yi, Gao, Cheng, DeGraaf, Stephanie, Madera, Mary A., Sievert, Julie A., Hollingsworth, Joy, Birdseye, Devon, Scheller, Henrik V., Hutmacher, Robert, Dahlberg, Jeffery, Jansson, Christer, Taylor, John W., Lemaux, Peggy G., Coleman-Derr, Devin
Published in Proceedings of the National Academy of Sciences - PNAS (16.04.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (16.04.2018)
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Journal Article
Isolation of Histone from Sorghum Leaf Tissue for Top Down Mass Spectrometry Profiling of Potential Epigenetic Markers
Zhou, Mowei, Abdali, Shadan H., Dilworth, David, Liu, Lifeng, Cole, Benjamin, Malhan, Neha, Ahkami, Amir H., Winkler, Tanya E., Hollingsworth, Joy, Sievert, Julie, Dahlberg, Jeff, Hutmacher, Robert, Madera, Mary, Owiti, Judith A., Hixson, Kim K., Lemaux, Peggy G., Jansson, Christer, Paša-Tolić, Ljiljana
Published in Journal of visualized experiments (04.03.2021)
Published in Journal of visualized experiments (04.03.2021)
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Journal Article
Isolation of Histone from Sorghum Leaf Tissue for Top Down Mass Spectrometry Profiling of Potential Epigenetic Markers
Zhou, Mowei, Abdali, Shadan H, Dilworth, David, Liu, Lifeng, Cole, Benjamin, Malhan, Neha, Ahkami, Amir H, Winkler, Tanya E, Hollingsworth, Joy, Sievert, Julie, Dahlberg, Jeff, Hutmacher, Robert, Madera, Mary, Owiti, Judith A, Hixson, Kim K, Lemaux, Peggy G, Jansson, Christer, Paša-Tolić, Ljiljana
Published in Journal of visualized experiments (04.03.2021)
Published in Journal of visualized experiments (04.03.2021)
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Journal Article