Search Results - "Macleod, James N" :: K.UTB vyhledávací portál | TBU Library Retrieval Portal

MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery

MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery

by Wang, Kai, Singh, Darshan, Zeng, Zheng, Coleman, Stephen J, Huang, Yan, Savich, Gleb L, He, Xiaping, Mieczkowski, Piotr, Grimm, Sara A, Perou, Charles M, MacLeod, James N, Chiang, Derek Y, Prins, Jan F, Liu, Jinze
Published in Nucleic acids research (01.10.2010)

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iMapSplice: Alleviating reference bias through personalized RNA-seq alignment

iMapSplice: Alleviating reference bias through personalized RNA-seq alignment

by Liu, Xinan, MacLeod, James N, Liu, Jinze
Published in PloS one (10.08.2018)

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Donor age effects on in vitro chondrogenic and osteogenic differentiation performance of equine bone marrow- and adipose tissue-derived mesenchymal stromal cells

Donor age effects on in vitro chondrogenic and osteogenic differentiation performance of equine bone marrow- and adipose tissue-derived mesenchymal stromal cells

by Bagge, Jasmin, Berg, Lise Charlotte, Janes, Jennifer, MacLeod, James N
Published in BMC veterinary research (03.11.2022)

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Advances in gene ontology utilization improve statistical power of annotation enrichment

Advances in gene ontology utilization improve statistical power of annotation enrichment

by Hinderer, 3rd, Eugene W, Flight, Robert M, Dubey, Rashmi, MacLeod, James N, Moseley, Hunter N B
Published in PloS one (15.08.2019)

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Improved reference genome for the domestic horse increases assembly contiguity and composition

Improved reference genome for the domestic horse increases assembly contiguity and composition

by Kalbfleisch, Theodore S, Rice, Edward S, DePriest, Jr, Michael S, Walenz, Brian P, Hestand, Matthew S, Vermeesch, Joris R, O Connell, Brendan L, Fiddes, Ian T, Vershinina, Alisa O, Saremi, Nedda F, Petersen, Jessica L, Finno, Carrie J, Bellone, Rebecca R, McCue, Molly E, Brooks, Samantha A, Bailey, Ernest, Orlando, Ludovic, Green, Richard E, Miller, Donald C, Antczak, Douglas F, MacLeod, James N
Published in Communications biology (01.01.2018)

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Kinetics of Gene Expression Changes in Equine Fetal Interzone and Anlagen Cells Over 14 Days of Induced Chondrogenesis

Kinetics of Gene Expression Changes in Equine Fetal Interzone and Anlagen Cells Over 14 Days of Induced Chondrogenesis

by Mok, Chan Hee, MacLeod, James N.
Published in Frontiers in veterinary science (09.08.2021)

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Transcriptional and Histochemical Signatures of Bone Marrow Mononuclear Cell-Mediated Resolution of Synovitis

Transcriptional and Histochemical Signatures of Bone Marrow Mononuclear Cell-Mediated Resolution of Synovitis

by Menarim, Bruno C, El-Sheikh Ali, Hossam, Loux, Shavahn C, Scoggin, Kirsten E, Kalbfleisch, Theodore S, MacLeod, James N, Dahlgren, Linda A
Published in Frontiers in immunology (08.12.2021)

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Cellular Proliferation of Equine Bone Marrow- and Adipose Tissue-Derived Mesenchymal Stem Cells Decline With Increasing Donor Age

Cellular Proliferation of Equine Bone Marrow- and Adipose Tissue-Derived Mesenchymal Stem Cells Decline With Increasing Donor Age

by Bagge, Jasmin, MacLeod, James N, Berg, Lise C
Published in Frontiers in veterinary science (10.12.2020)

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Annotation of the Protein Coding Regions of the Equine Genome

Annotation of the Protein Coding Regions of the Equine Genome

by Hestand, Matthew S, Kalbfleisch, Theodore S, Coleman, Stephen J, Zeng, Zheng, Liu, Jinze, Orlando, Ludovic, MacLeod, James N
Published in PloS one (24.06.2015)

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Tenascin-C expression controls the maturation of articular cartilage in mice

Tenascin-C expression controls the maturation of articular cartilage in mice

by Gruber, Bastian L, Mienaltowski, Michael J, MacLeod, James N, Schittny, Johannes, Kasper, Stephanie, Flück, Martin
Published in BMC research notes (17.02.2020)

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"Adopt-a-Tissue" Initiative Advances Efforts to Identify Tissue-Specific Histone Marks in the Mare

"Adopt-a-Tissue" Initiative Advances Efforts to Identify Tissue-Specific Histone Marks in the Mare

by Kingsley, N B, Hamilton, Natasha A, Lindgren, Gabriella, Orlando, Ludovic, Bailey, Ernie, Brooks, Samantha, McCue, Molly, Kalbfleisch, T S, MacLeod, James N, Petersen, Jessica L, Finno, Carrie J, Bellone, Rebecca R
Published in Frontiers in genetics (26.03.2021)

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Tissue Restricted Splice Junctions Originate Not Only from Tissue-Specific Gene Loci, but Gene Loci with a Broad Pattern of Expression

Tissue Restricted Splice Junctions Originate Not Only from Tissue-Specific Gene Loci, but Gene Loci with a Broad Pattern of Expression

by Hestand, Matthew S, Zeng, Zheng, Coleman, Stephen J, Liu, Jinze, MacLeod, James N
Published in PloS one (29.12.2015)

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Analysis of unannotated equine transcripts identified by mRNA sequencing

Analysis of unannotated equine transcripts identified by mRNA sequencing

by Coleman, Stephen J, Zeng, Zheng, Hestand, Matthew S, Liu, Jinze, Macleod, James N
Published in PloS one (29.07.2013)

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Genome-Wide Association Study among Four Horse Breeds Identifies a Common Haplotype Associated with In Vitro CD3+ T Cell Susceptibility/Resistance to Equine Arteritis Virus Infection

Genome-Wide Association Study among Four Horse Breeds Identifies a Common Haplotype Associated with In Vitro CD3+ T Cell Susceptibility/Resistance to Equine Arteritis Virus Infection

by YUN YOUNG GO, BAILEY, Ernest, COOK, Deborah G, COLEMAN, Stephen J, MACLEOD, James N, CHEN, Kuey-Chu, TIMONEY, Peter J, BALASURIYA, Udeni B. R
Published in Journal of Virology (01.12.2011)

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Comparison of the Equine Reference Sequence with Its Sanger Source Data and New Illumina Reads

Comparison of the Equine Reference Sequence with Its Sanger Source Data and New Illumina Reads

by Rebolledo-Mendez, Jovan, Hestand, Matthew S, Coleman, Stephen J, Zeng, Zheng, Orlando, Ludovic, MacLeod, James N, Kalbfleisch, Ted
Published in PloS one (24.06.2015)

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Comparison of Poly-A+ Selection and rRNA Depletion in Detection of lncRNA in Two Equine Tissues Using RNA-seq

Comparison of Poly-A+ Selection and rRNA Depletion in Detection of lncRNA in Two Equine Tissues Using RNA-seq

by Dahlgren, Anna R., Scott, Erica Y., Mansour, Tamer, Hales, Erin N., Ross, Pablo J., Kalbfleisch, Theodore S., MacLeod, James N., Petersen, Jessica L., Bellone, Rebecca R., Finno, Carrie J.
Published in Non-coding RNA (21.08.2020)

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Transcriptional adaptations following exercise in thoroughbred horse skeletal muscle highlights molecular mechanisms that lead to muscle hypertrophy

Transcriptional adaptations following exercise in thoroughbred horse skeletal muscle highlights molecular mechanisms that lead to muscle hypertrophy

by McGivney, Beatrice A, Eivers, Suzanne S, MacHugh, David E, MacLeod, James N, O'Gorman, Grace M, Park, Stephen D E, Katz, Lisa M, Hill, Emmeline W
Published in BMC genomics (30.12.2009)

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Correction: Analysis of Unannotated Equine Transcripts Identified by mRNA Sequencing

Correction: Analysis of Unannotated Equine Transcripts Identified by mRNA Sequencing

by Coleman, Stephen J., Zeng, Zheng, Hestand, Matthew S., Liu, Jinze, Macleod, James N.
Published in PloS one (19.09.2013)

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Differential gene expression associated with postnatal equine articular cartilage maturation

Differential gene expression associated with postnatal equine articular cartilage maturation

by Mienaltowski, Michael J, Huang, Liping, Stromberg, Arnold J, MacLeod, James N
Published in BMC musculoskeletal disorders (05.11.2008)

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Production of Calcium Maintenance Factor Stanniocalcin-1 (STC1) by the Equine Endometrium During the Early Pregnant Period

Production of Calcium Maintenance Factor Stanniocalcin-1 (STC1) by the Equine Endometrium During the Early Pregnant Period

by KIKUCHI, Masato, NAKANO, Yasuko, NAMBO, Yasuo, HANEDA, Shingo, MATSUI, Motozumi, MIYAKE, Yoichi, MACLEOD, James N., NAGAOKA, Kentaro, IMAKAWA, Kazuhiko
Published in Journal of Reproduction and Development (01.04.2011)

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