Realistic in silico generation and augmentation of single-cell RNA-seq data using generative adversarial networks
Marouf, Mohamed, Machart, Pierre, Bansal, Vikas, Kilian, Christoph, Magruder, Daniel S., Krebs, Christian F., Bonn, Stefan
Published in Nature communications (09.01.2020)
Published in Nature communications (09.01.2020)
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Journal Article
DISCERN: deep single-cell expression reconstruction for improved cell clustering and cell subtype and state detection
Hausmann, Fabian, Ergen, Can, Khatri, Robin, Marouf, Mohamed, Hänzelmann, Sonja, Gagliani, Nicola, Huber, Samuel, Machart, Pierre, Bonn, Stefan
Published in Genome Biology (20.09.2023)
Published in Genome Biology (20.09.2023)
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Journal Article
On TCR binding predictors failing to generalize to unseen peptides
Grazioli, Filippo, Mösch, Anja, Machart, Pierre, Li, Kai, Alqassem, Israa, O'Donnell, Timothy J, Min, Martin Renqiang
Published in Frontiers in immunology (21.10.2022)
Published in Frontiers in immunology (21.10.2022)
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Journal Article
Algorithmic advances in machine learning for single-cell expression analysis
Oller-Moreno, Sergio, Kloiber, Karin, Machart, Pierre, Bonn, Stefan
Published in Current opinion in systems biology (01.03.2021)
Published in Current opinion in systems biology (01.03.2021)
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Journal Article
METHOD AND SYSTEM FOR PREDICTING GENE EXPRESSION PERTURBATIONS
PILEGGI, Giampaolo, SIARHEYEU, Raman, MACHART, Pierre, GRAZIOLI, Filippo
Year of Publication 12.10.2023
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Year of Publication 12.10.2023
Patent
METHOD AND SYSTEM FOR PREDICTING TCR (T CELL RECEPTOR)-PEPTIDE INTERACTIONS
LI, Kai, MACHART, Pierre, GRAZIOLI, Filippo, MOESCH, Anja, MIN, Martin Renqiang
Year of Publication 27.07.2023
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Year of Publication 27.07.2023
Patent
DiSCERN - Deep Single Cell Expression ReconstructioN for improved cell clustering and cell subtype and state detection
Hausmann, Fabian, Ergen, Can, Khatri, Robin, Marouf, Mohamed, Hänzelmann, Sonja, Gagliani, Nicola, Huber, Samuel, Machart, Pierre, Bonn, Stefan
Published in bioRxiv (13.04.2022)
Published in bioRxiv (13.04.2022)
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Paper
Stochastic Low-Rank Kernel Learning for Regression
Machart, Pierre, Peel, Thomas, Ralaivola, Liva, Anthoine, Sandrine, Glotin, Hervé
Year of Publication 11.01.2012
Year of Publication 11.01.2012
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Journal Article
Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks
Marouf, Mohamed, Machart, Pierre, Daniel Sumner Sumner Magruder, Bansal, Vikas, Kilian, Christoph, Krebs, Christian F, Bonn, Stefan
Published in bioRxiv (24.10.2018)
Published in bioRxiv (24.10.2018)
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Paper
Stochastic Low-Rank Kernel Learning for Regression
Machart, Pierre, Peel, Thomas, Ralaivola, Liva, Anthoine, Sandrine, Glotin, Hervé
Published in arXiv.org (11.01.2012)
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Published in arXiv.org (11.01.2012)
Paper