Identification of gut microbiota and microbial metabolites regulated by an antimicrobial peptide lipocalin 2 in high fat diet-induced obesity
Qiu, Xiaoxue, Macchietto, Marissa G., Liu, Xiaotong, Lu, You, Ma, Yiwei, Guo, Hong, Saqui-Salces, Milena, Bernlohr, David A., Chen, Chi, Shen, Steven, Chen, Xiaoli
Published in International Journal of Obesity (01.01.2021)
Published in International Journal of Obesity (01.01.2021)
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Journal Article
Cell type- and replication stage-specific influenza virus responses in vivo
Fay, Elizabeth J, Aron, Stephanie L, Macchietto, Marissa G, Markman, Matthew W, Esser-Nobis, Katharina, Gale, Jr, Michael, Shen, Steven, Langlois, Ryan A
Published in PLoS pathogens (13.08.2020)
Published in PLoS pathogens (13.08.2020)
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Journal Article
T Cells in Nonlymphoid Tissues Give Rise to Lymph-Node-Resident Memory T Cells
Beura, Lalit K., Wijeyesinghe, Sathi, Thompson, Emily A., Macchietto, Marissa G., Rosato, Pamela C., Pierson, Mark J., Schenkel, Jason M., Mitchell, Jason S., Vezys, Vaiva, Fife, Brian T., Shen, Steven, Masopust, David
Published in Immunity (Cambridge, Mass.) (20.02.2018)
Published in Immunity (Cambridge, Mass.) (20.02.2018)
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Journal Article
SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification
Tardaguila, Manuel, de la Fuente, Lorena, Marti, Cristina, Pereira, Cécile, Pardo-Palacios, Francisco Jose, Del Risco, Hector, Ferrell, Marc, Mellado, Maravillas, Macchietto, Marissa, Verheggen, Kenneth, Edelmann, Mariola, Ezkurdia, Iakes, Vazquez, Jesus, Tress, Michael, Mortazavi, Ali, Martens, Lennart, Rodriguez-Navarro, Susana, Moreno-Manzano, Victoria, Conesa, Ana
Published in Genome research (01.03.2018)
Published in Genome research (01.03.2018)
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Journal Article
Activated entomopathogenic nematode infective juveniles release lethal venom proteins
Lu, Dihong, Macchietto, Marissa, Chang, Dennis, Barros, Mirayana M, Baldwin, James, Mortazavi, Ali, Dillman, Adler R
Published in PLoS pathogens (20.04.2017)
Published in PLoS pathogens (20.04.2017)
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Journal Article
Virus-induced transposable element expression up-regulation in human and mouse host cells
Macchietto, Marissa G, Langlois, Ryan A, Shen, Steven S
Published in Life science alliance (01.02.2020)
Published in Life science alliance (01.02.2020)
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Journal Article
The Impact of TCR Signal Strength on Resident Memory T Cell Formation during Influenza Virus Infection
Fiege, Jessica K, Stone, Ian A, Fay, Elizabeth J, Markman, Matthew W, Wijeyesinghe, Sathi, Macchietto, Marissa G, Shen, Steven, Masopust, David, Langlois, Ryan A
Published in The Journal of immunology (1950) (15.08.2019)
Published in The Journal of immunology (1950) (15.08.2019)
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Journal Article
Distinct antiviral signatures revealed by the magnitude and round of influenza virus replication in vivo
Sjaastad, Louisa E., Fay, Elizabeth J., Fiege, Jessica K., Macchietto, Marissa G., Stone, Ian A., Markman, Matthew W., Shen, Steven, Langlois, Ryan A.
Published in Proceedings of the National Academy of Sciences - PNAS (18.09.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (18.09.2018)
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Journal Article
A De Novo Whole Genome Assembly and Annotation of Parelaphostrongylus tenuis
Garwood, Tyler J., Richards, Jessie E., Macchietto, Marissa G., Gerhold, Richard W., Kania, Stephen A., Garbe, John R., Fountain-Jones, Nicholas M., Larsen, Peter A., Wolf, Tiffany M.
Published in Journal of nematology (01.03.2024)
Published in Journal of nematology (01.03.2024)
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Journal Article
Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks
Dillman, Adler R, Macchietto, Marissa, Porter, Camille F, Rogers, Alicia, Williams, Brian, Antoshechkin, Igor, Lee, Ming-Min, Goodwin, Zane, Lu, Xiaojun, Lewis, Edwin E, Goodrich-Blair, Heidi, Stock, S Patricia, Adams, Byron J, Sternberg, Paul W, Mortazavi, Ali
Published in Genome Biology (21.09.2015)
Published in Genome Biology (21.09.2015)
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Journal Article
The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
Srinivasan, Jagan, Dillman, Adler R, Macchietto, Marissa G, Heikkinen, Liisa, Lakso, Merja, Fracchia, Kelley M, Antoshechkin, Igor, Mortazavi, Ali, Wong, Garry, Sternberg, Paul W
Published in Genetics (Austin) (01.04.2013)
Published in Genetics (Austin) (01.04.2013)
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Journal Article
Effects of the SLICK1 mutation in PRLR on regulation of core body temperature and global gene expression in liver in cattle
Sosa, Froylan, Santos, José E.P., Rae, D. Owen, Larson, Colleen C., Macchietto, Marissa, Abrahante, Juan E., Amaral, Thiago F., Denicol, Anna C., Sonstegard, Tad S., Hansen, Peter J.
Published in Animal (Cambridge, England) (01.05.2022)
Published in Animal (Cambridge, England) (01.05.2022)
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Journal Article
Hybrid Assembly of the Genome of the Entomopathogenic Nematode Steinernema carpocapsae Identifies the X-Chromosome
Serra, Lorrayne, Macchietto, Marissa, Macias-Muñoz, Aide, McGill, Cassandra Joan, Rodriguez, Isaryhia Maya, Rodriguez, Bryan, Murad, Rabi, Mortazavi, Ali
Published in G3 : genes - genomes - genetics (01.08.2019)
Published in G3 : genes - genomes - genetics (01.08.2019)
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Journal Article
Adapting the Smart-seq2 Protocol for Robust Single Worm RNA-seq
Serra, Lorrayne, Chang, Dennis Z, Macchietto, Marissa, Williams, Katherine, Murad, Rabi, Lu, Dihong, Dillman, Adler R, Mortazavi, Ali
Published in Bio-protocol (20.02.2018)
Published in Bio-protocol (20.02.2018)
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Journal Article
2024-P: Protective Role of Lipocalin 2 in High-Fat Diet-Induced Gut Microbiota Dysbiosis
QIU, XIAOXUE (SHERYL), MACCHIETTO, MARISSA, SHEN, STEVE, CHEN, XIAOLI
Published in Diabetes (New York, N.Y.) (01.06.2019)
Published in Diabetes (New York, N.Y.) (01.06.2019)
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Journal Article
Allergen-induced DNA release by the airway epithelium amplifies type 2 immunity
Srisomboon, Yotesawee, Iijima, Koji, Colwell, Mathia, Maniak, Peter J., Macchietto, Marissa, Faulk, Christopher, Kita, Hirohito, O’Grady, Scott M.
Published in Journal of allergy and clinical immunology (01.02.2023)
Published in Journal of allergy and clinical immunology (01.02.2023)
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Journal Article
Whole‐genome assembly and annotation of northern wild rice, Zizania palustris L., supports a whole‐genome duplication in the Zizania genus
Haas, Matthew, Kono, Thomas, Macchietto, Marissa, Millas, Reneth, McGilp, Lillian, Shao, Mingqin, Duquette, Jacques, Qiu, Yinjie, Hirsch, Candice N., Kimball, Jennifer
Published in The Plant journal : for cell and molecular biology (01.09.2021)
Published in The Plant journal : for cell and molecular biology (01.09.2021)
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Journal Article
Chemotherapy resistance pathways identified by single cell RNA sequencing
Chandra, Shruthi, Johnson, Andrea, Shetty, Mihir, Cepela, Jason, Talukdar, Shobhana, Mattson, Jordan, Macchietto, Marissa, Henzler, Christine, Mullany, Sally, Nelson, Andrew, Wang, Jinhua, Winterhoff, Boris, Starr, Timothy
Published in Gynecologic oncology (01.08.2021)
Published in Gynecologic oncology (01.08.2021)
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Journal Article
Defining immune infiltrate heterogeneity by immunophenotyping of tumor micro-environment at single cell level: a step towards more effective personalized immunotherapy in ovarian cancer
Talukdar, Shobhana, Stock, Emily, Cepela, Jason, Shetty, Mihir, Wang, Jinhua, Nelson, Andrew, Macchietto, Marissa, Henzler, Christine, Mullany, Sally, Winterhoff, Boris, Starr, Timothy
Published in Gynecologic oncology (01.08.2021)
Published in Gynecologic oncology (01.08.2021)
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Journal Article
Comparison of combined positive score, Salgado TIL score, immunofluorescence and single cell RNA sequencing for predicting response to therapy
Johnson, Andrea, Chandra, Shruthi, Shetty, Mihir, Cepela, Jason, Talukdar, Shobhana, Mattson, Jordan, Macchietto, Marissa, Henzler, Christine, Nelson, Andrew, Wang, Jinhua, Winterhoff, Boris, Mullany, Sally, Starr, Timothy
Published in Gynecologic oncology (01.08.2021)
Published in Gynecologic oncology (01.08.2021)
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Journal Article