Construction and analysis of high-density linkage map using high-throughput sequencing data
Liu, Dongyuan, Ma, Chouxian, Hong, Weiguo, Huang, Long, Liu, Min, Liu, Hui, Zeng, Huaping, Deng, Dejing, Xin, Huaigen, Song, Jun, Xu, Chunhua, Sun, Xiaowen, Hou, Xilin, Wang, Xiaowu, Zheng, Hongkun
Published in PloS one (06.06.2014)
Published in PloS one (06.06.2014)
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Journal Article
SLAF-seq: an efficient method of large-scale de novo SNP discovery and genotyping using high-throughput sequencing
Sun, Xiaowen, Liu, Dongyuan, Zhang, Xiaofeng, Li, Wenbin, Liu, Hui, Hong, Weiguo, Jiang, Chuanbei, Guan, Ning, Ma, Chouxian, Zeng, Huaping, Xu, Chunhua, Song, Jun, Huang, Long, Wang, Chunmei, Shi, Junjie, Wang, Rui, Zheng, Xianhu, Lu, Cuiyun, Wang, Xiaowu, Zheng, Hongkun
Published in PloS one (19.03.2013)
Published in PloS one (19.03.2013)
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Journal Article
Construction of a high-density genetic map for sesame based on large scale marker development by specific length amplified fragment (SLAF) sequencing
Zhang, Yanxin, Wang, Linhai, Xin, Huaigen, Li, Donghua, Ma, Chouxian, Ding, Xia, Hong, Weiguo, Zhang, Xiurong
Published in BMC plant biology (24.09.2013)
Published in BMC plant biology (24.09.2013)
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Journal Article
High-throughput primer design by scoring in piecewise logistic model for multiple polymerase chain reaction variants
Zeng, Huaping, Chen, Kexin, Ma, Chouxian, Zhu, Biyin, Chuan, Jun, Zhang, Shuan, Tang, Lin, Yang, Ting, Sun, Zhaohui, Yang, Xingkun, Wang, Yu
Published in Scientific reports (07.12.2022)
Published in Scientific reports (07.12.2022)
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Journal Article
Massive expansion of the pig gut virome based on global metagenomic mining
Mi, Jiandui, Jing, Xiaoping, Ma, Chouxian, Yang, Yiwen, Li, Yong, Zhang, Yu, Long, Ruijun, Zheng, Haixue
Published in NPJ biofilms and microbiomes (29.08.2024)
Published in NPJ biofilms and microbiomes (29.08.2024)
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A Cell‐free DNA Barcode‐Enabled Single‐Molecule Test for Noninvasive Prenatal Diagnosis of Monogenic Disorders: Application to β‐Thalassemia
Yang, Xingkun, Zhou, Qinghua, Zhou, Wanjun, Zhong, Mei, Guo, Xiaoling, Wang, Xiaofeng, Fan, Xin, Yan, Shanhuo, Li, Liyan, Lai, Yunli, Wang, Yongli, Huang, Jin, Ye, Yuhua, Zeng, Huaping, Chuan, Jun, Du, Yuanping, Ma, Chouxian, Li, Peining, Song, Zhuo, Xu, Xiangmin
Published in Advanced science (05.06.2019)
Published in Advanced science (05.06.2019)
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Journal Article
PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions
Olson, Nathan D., Wagner, Justin, McDaniel, Jennifer, Stephens, Sarah H., Westreich, Samuel T., Prasanna, Anish G., Johanson, Elaine, Boja, Emily, Maier, Ezekiel J., Serang, Omar, Jáspez, David, Lorenzo-Salazar, José M., Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A., Flores, Carlos, Kyriakidis, Konstantinos, Malousi, Andigoni, Shafin, Kishwar, Pesout, Trevor, Jain, Miten, Paten, Benedict, Chang, Pi-Chuan, Kolesnikov, Alexey, Nattestad, Maria, Baid, Gunjan, Goel, Sidharth, Yang, Howard, Carroll, Andrew, Eveleigh, Robert, Bourgey, Mathieu, Bourque, Guillaume, Li, Gen, Ma, ChouXian, Tang, LinQi, Du, YuanPing, Zhang, ShaoWei, Morata, Jordi, Tonda, Raúl, Parra, Genís, Trotta, Jean-Rémi, Brueffer, Christian, Demirkaya-Budak, Sinem, Kabakci-Zorlu, Duygu, Turgut, Deniz, Kalay, Özem, Budak, Gungor, Narcı, Kübra, Arslan, Elif, Brown, Richard, Johnson, Ivan J., Dolgoborodov, Alexey, Semenyuk, Vladimir, Jain, Amit, Tetikol, H. Serhat, Jain, Varun, Ruehle, Mike, Lajoie, Bryan, Roddey, Cooper, Catreux, Severine, Mehio, Rami, Ahsan, Mian Umair, Liu, Qian, Wang, Kai, Ebrahim Sahraeian, Sayed Mohammad, Fang, Li Tai, Mohiyuddin, Marghoob, Hung, Calvin, Jain, Chirag, Feng, Hanying, Li, Zhipan, Chen, Luoqi, Sedlazeck, Fritz J., Zook, Justin M.
Published in Cell genomics (11.05.2022)
Published in Cell genomics (11.05.2022)
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Journal Article
PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions
Olson, Nathan D, Wagner, Justin, McDaniel, Jennifer, Stephens, Sarah H, Westreich, Samuel T, Prasanna, Anish G, Johanson, Elaine, Boja, Emily, Maier, Ezekiel J, Serang, Omar, Jáspez, David, Lorenzo-Salazar, José M, Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A, Flores, Carlos, Kyriakidis, Konstantinos, Malousi, Andigoni, Shafin, Kishwar, Pesout, Trevor, Jain, Miten, Paten, Benedict, Chang, Pi-Chuan, Kolesnikov, Alexey, Nattestad, Maria, Baid, Gunjan, Goel, Sidharth, Yang, Howard, Carroll, Andrew, Eveleigh, Robert, Bourgey, Mathieu, Bourque, Guillaume, Li, Gen, Ma, ChouXian, Tang, LinQi, Du, YuanPing, Zhang, ShaoWei, Morata, Jordi, Tonda, Raúl, Parra, Genís, Trotta, Jean-Rémi, Brueffer, Christian, Demirkaya-Budak, Sinem, Kabakci-Zorlu, Duygu, Turgut, Deniz, Kalay, Özem, Budak, Gungor, Narcı, Kübra, Arslan, Elif, Brown, Richard, Johnson, Ivan J, Dolgoborodov, Alexey, Semenyuk, Vladimir, Jain, Amit, Tetikol, H Serhat, Jain, Varun, Ruehle, Mike, Lajoie, Bryan, Roddey, Cooper, Catreux, Severine, Mehio, Rami, Ahsan, Mian Umair, Liu, Qian, Wang, Kai, Ebrahim Sahraeian, Sayed Mohammad, Fang, Li Tai, Mohiyuddin, Marghoob, Hung, Calvin, Jain, Chirag, Feng, Hanying, Li, Zhipan, Chen, Luoqi, Sedlazeck, Fritz J, Zook, Justin M
Published in Cell genomics (11.05.2022)
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Published in Cell genomics (11.05.2022)
Journal Article
SLAF-seq: An Efficient Method of Large-Scale De Novo SNP Discovery and Genotyping Using High-Throughput Sequencing. e58700
Sun, Xiaowen, Liu, Dongyuan, Zhang, Xiaofeng, Li, Wenbin, Liu, Hui, Hong, Weiguo, Jiang, Chuanbei, Guan, Ning, Ma, Chouxian, Zeng, Huaping
Published in PloS one (01.03.2013)
Published in PloS one (01.03.2013)
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Journal Article
Container dockerfile and container mirror image quick generation methods and systems
Yi, Chungen, Li, Yanfei, Ma, Chouxian, Xu, Xiali, Yang, Yao, Mao, Haibo, Zhao, Lixia, Song, Zhuo, Zhu, Delong, Jiang, Yanhuang, Tang, Junxiang, Wu, Kan, Li, Gen, Sun, Zhaohui, Zhou, Xu, Ning, Wenfei, Xie, Chenglong, Chuan, Jun
Year of Publication 23.05.2023
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Year of Publication 23.05.2023
Patent
GENE SEQUENCING DATA COMPRESSION METHOD AND DECOMPRESSION METHOD, SYSTEM AND COMPUTER-READABLE MEDIUM
LI, Gen, MAO, Haibo, SONG, Zhuo, XU, Xiali, MA, Chouxian, FENG, Bolun, WANG, Zhenguo
Year of Publication 17.09.2020
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Year of Publication 17.09.2020
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Low-depth sequencing population genotype filling calculation memory optimization method
MA CHOUXIAN, HUANG LILEI, MAO HAIBO, WANG ZHENGUO, FENG BOLUN, YANG RENWU, JIANG YANHUANG
Year of Publication 03.12.2021
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Year of Publication 03.12.2021
Patent
CONTAINER DOCKERFILE AND CONTAINER MIRROR IMAGE QUICK GENERATION METHODS AND SYSTEMS
WU, Kan, LI, Gen, YI, Chungen, MAO, Haibo, CHUAN, Jun, XU, Xiali, NING, Wenfei, TANG, Junxiang, JIANG, Yanhuang, MA, Chouxian, XIE, Chenglong, ZHOU, Xu, SONG, Zhuo, LI, Yanfei, ZHAO, Lixia, SUN, Zhaohui, YANG, Yao, ZHU, Delong
Year of Publication 17.09.2020
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Year of Publication 17.09.2020
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Male fetus cffDNA content calculation method based on X chromosome
MA CHOUXIAN, HUANG WENJING, LI GEN, WANG ZHENGUO, YUAN MENGXI, YANG RENWU, JIANG YANHUANG
Year of Publication 22.06.2021
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Year of Publication 22.06.2021
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Comparison gene sequencing data compression method and system and computer readable medium
SONG ZHUO, MA CHOUXIAN, LI GEN, WANG ZHENGUO, FENG BOLUN, LIU PENGXIA
Year of Publication 16.07.2019
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Year of Publication 16.07.2019
Patent
Comparison type gene sequencing data decompression method and system and computer readable medium
SONG ZHUO, MA CHOUXIAN, LI GEN, WANG ZHENGUO, FENG BOLUN, LIU PENGXIA
Year of Publication 30.04.2019
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Year of Publication 30.04.2019
Patent
Primer designing method for gene sequencing and system thereof
SONG ZHUO, MA CHOUXIAN, WANG XIAOFENG, YANG TING, ZENG HUAPING, DU YUANPING
Year of Publication 19.04.2019
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Year of Publication 19.04.2019
Patent
GENE SEQUENCING DATA COMPRESSION METHOD AND DECOMPRESSION METHOD, SYSTEM, AND COMPUTER READABLE MEDIUM
LI, Gen, MAO, Haibo, SONG, Zhuo, XU, Xiali, MA, Chouxian, FENG, Bolun, WANG, Zhenguo
Year of Publication 02.05.2019
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Year of Publication 02.05.2019
Patent