Large-scale molecular phylogeny, morphology, divergence-time estimation, and the fossil record of advanced caenophidian snakes (Squamata: Serpentes)
Zaher, Hussam, Murphy, Robert W, Arredondo, Juan Camilo, Graboski, Roberta, Machado-Filho, Paulo Roberto, Mahlow, Kristin, Montingelli, Giovanna G, Quadros, Ana Bottallo, Orlov, Nikolai L, Wilkinson, Mark, Zhang, Ya-Ping, Grazziotin, Felipe G
Published in PloS one (10.05.2019)
Published in PloS one (10.05.2019)
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Journal Article
VennPainter: A Tool for the Comparison and Identification of Candidate Genes Based on Venn Diagrams
Lin, Guoliang, Chai, Jing, Yuan, Shuo, Mai, Chao, Cai, Li, Murphy, Robert W, Zhou, Wei, Luo, Jing
Published in PloS one (27.04.2016)
Published in PloS one (27.04.2016)
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Journal Article
Species groups distributed across elevational gradients reveal convergent and continuous genetic adaptation to high elevations
Sun, Yan-Bo, Fu, Ting-Ting, Jin, Jie-Qiong, Murphy, Robert W., Hillis, David M., Zhang, Ya-Ping, Che, Jing
Published in Proceedings of the National Academy of Sciences - PNAS (06.11.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (06.11.2018)
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Journal Article
Association filtering and generative adversarial networks for predicting lncRNA-associated disease
Zhong, Hua, Luo, Jing, Tang, Lin, Liao, Shicheng, Lu, Zhonghao, Lin, Guoliang, Murphy, Robert W, Liu, Lin
Published in BMC bioinformatics (05.06.2023)
Published in BMC bioinformatics (05.06.2023)
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Journal Article
Puzzle Hi-C: An accurate scaffolding software
Lin, Guoliang, Huang, Zhiru, Yue, Tingsong, Chai, Jing, Li, Yan, Yang, Huimin, Qin, Wanting, Yang, Guobing, Murphy, Robert W, Zhang, Ya-Ping, Zhang, Zijie, Zhou, Wei, Luo, Jing
Published in PloS one (15.07.2024)
Published in PloS one (15.07.2024)
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Journal Article
Genomic incompatibilities in the diploid and tetraploid offspring of the goldfish × common carp cross
Liu, Shaojun, Luo, Jing, Chai, Jing, Ren, Li, Zhou, Yi, Huang, Feng, Liu, Xiaochuan, Chen, Yubao, Zhang, Chun, Tao, Min, Lu, Bin, Zhou, Wei, Lin, Guoliang, Mai, Chao, Yuan, Shuo, Wang, Jun, Li, Tao, Qin, Qinbo, Feng, Hao, Luo, Kaikun, Xiao, Jun, Zhong, Huan, Zhao, Rurong, Duan, Wei, Song, Zhenyan, Wang, Yanqin, Wang, Jing, Zhong, Li, Wang, Lu, Ding, Zhaoli, Du, Zhenglin, Lu, Xuemei, Gao, Yun, Murphy, Robert W., Liu, Yun, Meyer, Axel, Zhang, Ya-Ping
Published in Proceedings of the National Academy of Sciences - PNAS (02.02.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (02.02.2016)
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Journal Article
Parallel evolution of auditory genes for echolocation in bats and toothed whales
Shen, Yong-Yi, Liang, Lu, Li, Gui-Sheng, Murphy, Robert W, Zhang, Ya-Ping
Published in PLoS genetics (01.06.2012)
Published in PLoS genetics (01.06.2012)
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Journal Article
Whole-genome sequence of the Tibetan frog Nanorana parkeri and the comparative evolution of tetrapod genomes
Sun, Yan-Bo, Xiong, Zi-Jun, Xiang, Xue-Yan, Liu, Shi-Ping, Zhou, Wei-Wei, Tu, Xiao-Long, Zhong, Li, Wang, Lu, Wu, Dong-Dong, Zhang, Bao-Lin, Zhu, Chun-Ling, Yang, Min-Min, Chen, Hong-Man, Li, Fang, Zhou, Long, Feng, Shao-Hong, Huang, Chao, Zhang, Guo-Jie, Irwin, David, Hillis, David M, Murphy, Robert W, Yang, Huan-Ming, Che, Jing, Wang, Jun, Zhang, Ya-Ping
Published in Proceedings of the National Academy of Sciences - PNAS (17.03.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (17.03.2015)
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Journal Article
Geological events play a larger role than Pleistocene climatic fluctuations in driving the genetic structure of Quasipaa boulengeri (Anura: Dicroglossidae)
Yan, Fang, Zhou, Weiwei, Zhao, Haitao, Yuan, Zhiyong, Wang, Yunyu, Jiang, Ke, Jin, Jieqiong, Murphy, Robert W., Che, Jing, Zhang, Yaping
Published in Molecular ecology (01.02.2013)
Published in Molecular ecology (01.02.2013)
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Journal Article
The origin of multiple clones in the parthenogenetic lizard species Darevskia rostombekowi
Ryskov, Alexey P, Osipov, Fedor A, Omelchenko, Andrey V, Semyenova, Seraphima K, Girnyk, Anastasiya E, Korchagin, Vitaly I, Vergun, Andrey A, Murphy, Robert W
Published in PloS one (20.09.2017)
Published in PloS one (20.09.2017)
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Journal Article
Convergent Evolution of Mitochondrial Genes in Deep-Sea Fishes
Shen, Xuejuan, Pu, Zhiqing, Chen, Xiao, Murphy, Robert W., Shen, Yongyi
Published in Frontiers in genetics (03.10.2019)
Published in Frontiers in genetics (03.10.2019)
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Journal Article
Multilocus phylogeny and cryptic diversity of white-toothed shrews (Mammalia, Eulipotyphla, Crocidura) in China
Chen, Shunde, Qing, Jiao, Liu, Zhu, Liu, Yang, Tang, Mingkun, Murphy, Robert W, Pu, Yingting, Wang, Xuming, Tang, Keyi, Guo, Keji, Jiang, Xuelong, Liu, Shaoying
Published in BMC ecology and evolution (14.02.2020)
Published in BMC ecology and evolution (14.02.2020)
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Journal Article
Universal COI primers for DNA barcoding amphibians
CHE, JING, CHEN, HONG-MAN, YANG, JUN-XIAO, JIN, JIE-QIONG, JIANG, KE, YUAN, ZHI-YONG, MURPHY, ROBERT W., ZHANG, YA-PING
Published in Molecular ecology resources (01.03.2012)
Published in Molecular ecology resources (01.03.2012)
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Journal Article
Multilocus phylogeography of the brown-spotted pitviper Protobothrops mucrosquamatus (Reptilia: Serpentes: Viperidae) sheds a new light on the diversification pattern in Asia
Guo, Peng, Liu, Qin, Zhu, Fei, Zhong, Guang H., Che, Jing, Wang, Ping, Xie, Yu L., Murphy, Robert W., Malhotra, Anita
Published in Molecular phylogenetics and evolution (01.04.2019)
Published in Molecular phylogenetics and evolution (01.04.2019)
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Journal Article
Climate niche conservatism and complex topography illuminate the cryptic diversification of Asian shrew-like moles
Wan, Tao, He, Kai, Jin, Wei, Liu, Shao-Ying, Chen, Zhong-Zheng, Zhang, Bin, Murphy, Robert W., Jiang, Xue-Long
Published in Journal of biogeography (01.10.2018)
Published in Journal of biogeography (01.10.2018)
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Journal Article
Historical museum collections clarify the evolutionary history of cryptic species radiation in the world's largest amphibians
Turvey, Samuel T., Marr, Melissa M., Barnes, Ian, Brace, Selina, Tapley, Benjamin, Murphy, Robert W., Zhao, Ermi, Cunningham, Andrew A.
Published in Ecology and evolution (01.09.2019)
Published in Ecology and evolution (01.09.2019)
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Journal Article
The Agassiz's desert tortoise genome provides a resource for the conservation of a threatened species
Tollis, Marc, DeNardo, Dale F, Cornelius, John A, Dolby, Greer A, Edwards, Taylor, Henen, Brian T, Karl, Alice E, Murphy, Robert W, Kusumi, Kenro
Published in PloS one (31.05.2017)
Published in PloS one (31.05.2017)
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