Proton-pumping mechanism of cytochrome C oxidase
Yoshikawa, Shinya, Muramoto, Kazumasa, Shinzawa-Itoh, Kyoko
Published in Annual review of biophysics (09.06.2011)
Published in Annual review of biophysics (09.06.2011)
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Critical roles of the CuB site in efficient proton pumping as revealed by crystal structures of mammalian cytochrome c oxidase catalytic intermediates
Shimada, Atsuhiro, Hara, Fumiyoshi, Shinzawa-Itoh, Kyoko, Kanehisa, Nobuko, Yamashita, Eiki, Muramoto, Kazumasa, Tsukihara, Tomitake, Yoshikawa, Shinya
Published in The Journal of biological chemistry (01.09.2021)
Published in The Journal of biological chemistry (01.09.2021)
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Determination of damage-free crystal structure of an X-ray–sensitive protein using an XFEL
Hirata, Kunio, Shinzawa-Itoh, Kyoko, Yano, Naomine, Takemura, Shuhei, Kato, Koji, Hatanaka, Miki, Muramoto, Kazumasa, Kawahara, Takako, Tsukihara, Tomitake, Yamashita, Eiki, Tono, Kensuke, Ueno, Go, Hikima, Takaaki, Murakami, Hironori, Inubushi, Yuichi, Yabashi, Makina, Ishikawa, Tetsuya, Yamamoto, Masaki, Ogura, Takashi, Sugimoto, Hiroshi, Shen, Jian-Ren, Yoshikawa, Shinya, Ago, Hideo
Published in Nature methods (01.07.2014)
Published in Nature methods (01.07.2014)
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The Mg2+-containing Water Cluster of Mammalian Cytochrome c Oxidase Collects Four Pumping Proton Equivalents in Each Catalytic Cycle
Yano, Naomine, Muramoto, Kazumasa, Shimada, Atsuhiro, Takemura, Shuhei, Baba, Junpei, Fujisawa, Hidenori, Mochizuki, Masao, Shinzawa-Itoh, Kyoko, Yamashita, Eiki, Tsukihara, Tomitake, Yoshikawa, Shinya
Published in The Journal of biological chemistry (11.11.2016)
Published in The Journal of biological chemistry (11.11.2016)
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Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate
Tosha, Takehiko, Nomura, Takashi, Nishida, Takuma, Saeki, Naoya, Okubayashi, Kouta, Yamagiwa, Raika, Sugahara, Michihiro, Nakane, Takanori, Yamashita, Keitaro, Hirata, Kunio, Ueno, Go, Kimura, Tetsunari, Hisano, Tamao, Muramoto, Kazumasa, Sawai, Hitomi, Takeda, Hanae, Mizohata, Eiichi, Yamashita, Ayumi, Kanematsu, Yusuke, Takano, Yu, Nango, Eriko, Tanaka, Rie, Nureki, Osamu, Shoji, Osami, Ikemoto, Yuka, Murakami, Hironori, Owada, Shigeki, Tono, Kensuke, Yabashi, Makina, Yamamoto, Masaki, Ago, Hideo, Iwata, So, Sugimoto, Hiroshi, Shiro, Yoshitsugu, Kubo, Minoru
Published in Nature communications (17.11.2017)
Published in Nature communications (17.11.2017)
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Bovine cytochrome c oxidase structures enable O₂ reduction with minimization of reactive oxygens and provide a proton-pumping gate
Muramoto, Kazumasa, Ohta, Kazuhiro, Shinzawa-Itoh, Kyoko, Kanda, Katsumasa, Taniguchi, Maki, Nabekura, Hiroyuki, Yamashita, Eiki, Tsukihara, Tomitake, Yoshikawa, Shinya
Published in Proceedings of the National Academy of Sciences - PNAS (27.04.2010)
Published in Proceedings of the National Academy of Sciences - PNAS (27.04.2010)
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Structures and physiological roles of 13 integral lipids of bovine heart cytochrome c oxidase
Shinzawa-Itoh, Kyoko, Aoyama, Hiroshi, Muramoto, Kazumasa, Terada, Hirohito, Kurauchi, Tsuyoshi, Tadehara, Yoshiki, Yamasaki, Akiko, Sugimura, Takashi, Kurono, Sadamu, Tsujimoto, Kazuo, Mizushima, Tsunehiro, Yamashita, Eiki, Tsukihara, Tomitake, Yoshikawa, Shinya
Published in The EMBO journal (21.03.2007)
Published in The EMBO journal (21.03.2007)
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peroxide bridge between Fe and Cu ions in the O₂ reduction site of fully oxidized cytochrome c oxidase could suppress the proton pump
Aoyama, Hiroshi, Muramoto, Kazumasa, Shinzawa-Itoh, Kyoko, Hirata, Kunio, Yamashita, Eiki, Tsukihara, Tomitake, Ogura, Takashi, Yoshikawa, Shinya
Published in Proceedings of the National Academy of Sciences - PNAS (17.02.2009)
Published in Proceedings of the National Academy of Sciences - PNAS (17.02.2009)
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Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases
Nishida, Yuya, Yanagisawa, Sachiko, Morita, Rikuri, Shigematsu, Hideki, Shinzawa-Itoh, Kyoko, Yuki, Hitomi, Ogasawara, Satoshi, Shimuta, Ken, Iwamoto, Takashi, Nakabayashi, Chisa, Matsumura, Waka, Kato, Hisakazu, Gopalasingam, Chai, Nagao, Takemasa, Qaqorh, Tasneem, Takahashi, Yusuke, Yamazaki, Satoru, Kamiya, Katsumasa, Harada, Ryuhei, Mizuno, Nobuhiro, Takahashi, Hideyuki, Akeda, Yukihiro, Ohnishi, Makoto, Ishii, Yoshikazu, Kumasaka, Takashi, Murata, Takeshi, Muramoto, Kazumasa, Tosha, Takehiko, Shiro, Yoshitsugu, Honma, Teruki, Shigeta, Yasuteru, Kubo, Minoru, Takashima, Seiji, Shintani, Yasunori
Published in Nature communications (08.12.2022)
Published in Nature communications (08.12.2022)
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Characterization of the quinol-dependent nitric oxide reductase from the pathogen Neisseria meningitidis, an electrogenic enzyme
Gonska, Nathalie, Young, David, Yuki, Riki, Okamoto, Takuya, Hisano, Tamao, Antonyuk, Svetlana, Hasnain, S. Samar, Muramoto, Kazumasa, Shiro, Yoshitsugu, Tosha, Takehiko, Ädelroth, Pia
Published in Scientific reports (26.02.2018)
Published in Scientific reports (26.02.2018)
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Author Correction: Identifying antibiotics based on structural differences in the conserved allostery from mitochondrial heme-copper oxidases
Nishida, Yuya, Yanagisawa, Sachiko, Morita, Rikuri, Shigematsu, Hideki, Shinzawa-Itoh, Kyoko, Yuki, Hitomi, Ogasawara, Satoshi, Shimuta, Ken, Iwamoto, Takashi, Nakabayashi, Chisa, Matsumura, Waka, Kato, Hisakazu, Gopalasingam, Chai, Nagao, Takemasa, Qaqorh, Tasneem, Takahashi, Yusuke, Yamazaki, Satoru, Kamiya, Katsumasa, Harada, Ryuhei, Mizuno, Nobuhiro, Takahashi, Hideyuki, Akeda, Yukihiro, Ohnishi, Makoto, Ishii, Yoshikazu, Kumasaka, Takashi, Murata, Takeshi, Muramoto, Kazumasa, Tosha, Takehiko, Shiro, Yoshitsugu, Honma, Teruki, Shigeta, Yasuteru, Kubo, Minoru, Takashima, Seiji, Shintani, Yasunori
Published in Nature communications (21.12.2022)
Published in Nature communications (21.12.2022)
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Journal Article
proton pumping pathway of bovine heart cytochrome c oxidase
Shimokata, Kunitoshi, Katayama, Yukie, Murayama, Haruka, Suematsu, Makoto, Tsukihara, Tomitake, Muramoto, Kazumasa, Aoyama, Hiroshi, Yoshikawa, Shinya, Shimada, Hideo
Published in Proceedings of the National Academy of Sciences - PNAS (06.03.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (06.03.2007)
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The Low-Spin Heme of Cytochrome c Oxidase as the Driving Element of the Proton-Pumping Process
Tsukihara, Tomitake, Shimokata, Kunitoshi, Katayama, Yukie, Shimada, Hideo, Muramoto, Kazumasa, Aoyama, Hiroshi, Mochizuki, Masao, Shinzawa-Itoh, Kyoko, Yamashita, Eiki, Yao, Min, Ishimura, Yuzuru, Yoshikawa, Shinya
Published in Proceedings of the National Academy of Sciences - PNAS (23.12.2003)
Published in Proceedings of the National Academy of Sciences - PNAS (23.12.2003)
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Journal Article
histidine residue acting as a controlling site for dioxygen reduction and proton pumping by cytochrome c oxidase
Muramoto, Kazumasa, Hirata, Kunio, Shinzawa-Itoh, Kyoko, Yoko-o, Shinji, Yamashita, Eiki, Aoyama, Hiroshi, Tsukihara, Tomitake, Yoshikawa, Shinya
Published in Proceedings of the National Academy of Sciences - PNAS (08.05.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (08.05.2007)
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Solid-Phase Stereocontrolled Synthesis of Oligomeric P‑Modified Glycosyl Phosphate Derivatives Using the Oxazaphospholidine Method
Sato, Kazuki, Hagio, Tomoya, Sano, Michi, Muramoto, Kazumasa, Yaoita, Aya, Noro, Mihoko, Hara, Rintaro Iwata, Wada, Takeshi
Published in ACS omega (03.08.2021)
Published in ACS omega (03.08.2021)
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The active form of quinol-dependent nitric oxide reductase from Neisseria meningitidis is a dimer
Jamali, M Arif M, Gopalasingam, Chai C, Johnson, Rachel M, Tosha, Takehiko, Muramoto, Kazumasa, Muench, Stephen P, Antonyuk, Svetlana V, Shiro, Yoshitsugu, Hasnain, Samar S
Published in IUCrJ (01.05.2020)
Published in IUCrJ (01.05.2020)
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Journal Article
The 1.3-Å resolution structure of bovine cytochrome c oxidase suggests a dimerization mechanism
Shinzawa-Itoh, Kyoko, Hatanaka, Miki, Fujita, Kazuya, Yano, Naomine, Ogasawara, Yumi, Iwata, Jun, Yamashita, Eiki, Tsukihara, Tomitake, Yoshikawa, Shinya, Muramoto, Kazumasa
Published in BBA advances (01.01.2021)
Published in BBA advances (01.01.2021)
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Improved X-ray structures of bovine heart cytochrome c oxidase reveal redox-driven proton active transports by Mg2 +-containing water cluster
Yoshikawa, Shinya, Yano, Naomine, Shinzawa-Itoh, Kyoko, Muramoto, Kazumasa, Yamashita, Eiki, Tsukihara, Tomitake
Published in Biochimica et biophysica acta. Bioenergetics (01.07.2014)
Published in Biochimica et biophysica acta. Bioenergetics (01.07.2014)
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