High throughput phenotyping to accelerate crop breeding and monitoring of diseases in the field
Shakoor, Nadia, Lee, Scott, Mockler, Todd C
Published in Current opinion in plant biology (01.08.2017)
Published in Current opinion in plant biology (01.08.2017)
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Journal Article
Time of day and network reprogramming during drought induced CAM photosynthesis in Sedum album
Wai, Ching Man, Weise, Sean E, Ozersky, Philip, Mockler, Todd C, Michael, Todd P, VanBuren, Robert
Published in PLoS genetics (14.06.2019)
Published in PLoS genetics (14.06.2019)
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Journal Article
Development and Evaluation of a 9K SNP Array for Peach by Internationally Coordinated SNP Detection and Validation in Breeding Germplasm
Verde, Ignazio, Bassil, Nahla, Scalabrin, Simone, Gilmore, Barbara, Lawley, Cynthia T, Gasic, Ksenija, Micheletti, Diego, Rosyara, Umesh R, Cattonaro, Federica, Vendramin, Elisa, Main, Dorrie, Aramini, Valeria, Blas, Andrea L, Mockler, Todd C, Bryant, Douglas W, Wilhelm, Larry, Troggio, Michela, Sosinski, Bryon, Aranzana, Maria José, Arús, Pere, Iezzoni, Amy, Morgante, Michele, Peace, Cameron, Wu, Rongling
Published in PloS one (20.04.2012)
Published in PloS one (20.04.2012)
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Journal Article
Precise insertion and guided editing of higher plant genomes using Cpf1 CRISPR nucleases
Begemann, Matthew B., Gray, Benjamin N., January, Emma, Gordon, Gina C., He, Yonghua, Liu, Haijun, Wu, Xingrong, Brutnell, Thomas P., Mockler, Todd C., Oufattole, Mohammed
Published in Scientific reports (14.09.2017)
Published in Scientific reports (14.09.2017)
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Journal Article
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)
Ming, Ray, VanBuren, Robert, Liu, Yanling, Yang, Mei, Han, Yuepeng, Li, Lei-Ting, Zhang, Qiong, Kim, Min-Jeong, Schatz, Michael C, Campbell, Michael, Li, Jingping, Bowers, John E, Tang, Haibao, Lyons, Eric, Ferguson, Ann A, Narzisi, Giuseppe, Nelson, David R, Blaby-Haas, Crysten E, Gschwend, Andrea R, Jiao, Yuannian, Der, Joshua P, Zeng, Fanchang, Han, Jennifer, Min, Xiang Jia, Hudson, Karen A, Singh, Ratnesh, Grennan, Aleel K, Karpowicz, Steven J, Watling, Jennifer R, Ito, Kikukatsu, Robinson, Sharon A, Hudson, Matthew E, Yu, Qingyi, Mockler, Todd C, Carroll, Andrew, Zheng, Yun, Sunkar, Ramanjulu, Jia, Ruizong, Chen, Nancy, Arro, Jie, Wai, Ching Man, Wafula, Eric, Spence, Ashley, Han, Yanni, Xu, Liming, Zhang, Jisen, Peery, Rhiannon, Haus, Miranda J, Xiong, Wenwei, Walsh, James A, Wu, Jun, Wang, Ming-Li, Zhu, Yun J, Paull, Robert E, Britt, Anne B, Du, Chunguang, Downie, Stephen R, Schuler, Mary A, Michael, Todd P, Long, Steve P, Ort, Donald R, William Schopf, J, Gang, David R, Jiang, Ning, Yandell, Mark, dePamphilis, Claude W, Merchant, Sabeeha S, Paterson, Andrew H, Buchanan, Bob B, Li, Shaohua, Shen-Miller, Jane
Published in Genome biology (10.05.2013)
Published in Genome biology (10.05.2013)
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Journal Article
Genome-wide mapping of alternative splicing in Arabidopsis thaliana
Filichkin, Sergei A, Priest, Henry D, Givan, Scott A, Shen, Rongkun, Bryant, Douglas W, Fox, Samuel E, Wong, Weng-Keen, Mockler, Todd C
Published in Genome research (01.01.2010)
Published in Genome research (01.01.2010)
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Journal Article
Exceptional subgenome stability and functional divergence in the allotetraploid Ethiopian cereal teff
VanBuren, Robert, Man Wai, Ching, Wang, Xuewen, Pardo, Jeremy, Yocca, Alan E., Wang, Hao, Chaluvadi, Srinivasa R., Han, Guomin, Bryant, Douglas, Edger, Patrick P., Messing, Joachim, Sorrells, Mark E., Mockler, Todd C., Bennetzen, Jeffrey L., Michael, Todd P.
Published in Nature communications (14.02.2020)
Published in Nature communications (14.02.2020)
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Journal Article
Global profiling of rice and poplar transcriptomes highlights key conserved circadian-controlled pathways and cis-regulatory modules
Filichkin, Sergei A, Breton, Ghislain, Priest, Henry D, Dharmawardhana, Palitha, Jaiswal, Pankaj, Fox, Samuel E, Michael, Todd P, Chory, Joanne, Kay, Steve A, Mockler, Todd C
Published in PloS one (09.06.2011)
Published in PloS one (09.06.2011)
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Journal Article
High density SNP mapping and QTL analysis for time of leaf budburst in Corylus avellana L
Torello Marinoni, Daniela, Valentini, Nadia, Portis, Ezio, Acquadro, Alberto, Beltramo, Chiara, Mehlenbacher, Shawn A, Mockler, Todd C, Rowley, Erik R, Botta, Roberto
Published in PloS one (02.04.2018)
Published in PloS one (02.04.2018)
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Journal Article
Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum
VanBuren, Robert, Bryant, Doug, Edger, Patrick P., Tang, Haibao, Burgess, Diane, Challabathula, Dinakar, Spittle, Kristi, Hall, Richard, Gu, Jenny, Lyons, Eric, Freeling, Michael, Bartels, Dorothea, Ten Hallers, Boudewijn, Hastie, Alex, Michael, Todd P., Mockler, Todd C.
Published in Nature (London) (26.11.2015)
Published in Nature (London) (26.11.2015)
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Journal Article
A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria
Fahlgren, Noah, Feldman, Maximilian, Gehan, Malia A., Wilson, Melinda S., Shyu, Christine, Bryant, Douglas W., Hill, Steven T., McEntee, Colton J., Warnasooriya, Sankalpi N., Kumar, Indrajit, Ficor, Tracy, Turnipseed, Stephanie, Gilbert, Kerrigan B., Brutnell, Thomas P., Carrington, James C., Mockler, Todd C., Baxter, Ivan
Published in Molecular plant (05.10.2015)
Published in Molecular plant (05.10.2015)
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Journal Article
Quantifying Leaf Chlorophyll Concentration of Sorghum from Hyperspectral Data Using Derivative Calculus and Machine Learning
Bhadra, Sourav, Sagan, Vasit, Maimaitijiang, Maitiniyazi, Maimaitiyiming, Matthew, Newcomb, Maria, Shakoor, Nadia, Mockler, Todd C.
Published in Remote sensing (Basel, Switzerland) (29.06.2020)
Published in Remote sensing (Basel, Switzerland) (29.06.2020)
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Journal Article
Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla
VanBuren, Robert, Wai, Ching Man, Ou, Shujun, Pardo, Jeremy, Bryant, Doug, Jiang, Ning, Mockler, Todd C., Edger, Patrick, Michael, Todd P.
Published in Nature communications (02.01.2018)
Published in Nature communications (02.01.2018)
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Journal Article
Development and Evaluation of a Genome-Wide 6K SNP Array for Diploid Sweet Cherry and Tetraploid Sour Cherry
Peace, Cameron, Bassil, Nahla, Main, Dorrie, Ficklin, Stephen, Rosyara, Umesh R, Stegmeir, Travis, Sebolt, Audrey, Gilmore, Barbara, Lawley, Cindy, Mockler, Todd C, Bryant, Douglas W, Wilhelm, Larry, Iezzoni, Amy, Wu, Rongling
Published in PloS one (20.12.2012)
Published in PloS one (20.12.2012)
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Journal Article
Network discovery pipeline elucidates conserved time-of-day-specific cis-regulatory modules
Michael, Todd P, Mockler, Todd C, Breton, Ghislain, McEntee, Connor, Byer, Amanda, Trout, Jonathan D, Hazen, Samuel P, Shen, Rongkun, Priest, Henry D, Sullivan, Christopher M, Givan, Scott A, Yanovsky, Marcelo, Hong, Fangxin, Kay, Steve A, Chory, Joanne
Published in PLoS genetics (01.02.2008)
Published in PLoS genetics (01.02.2008)
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Journal Article
Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression
Vining, Kelly J, Pomraning, Kyle R, Wilhelm, Larry J, Priest, Henry D, Pellegrini, Matteo, Mockler, Todd C, Freitag, Michael, Strauss, Steven H
Published in BMC genomics (17.01.2012)
Published in BMC genomics (17.01.2012)
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Journal Article
UAV-Based High Resolution Thermal Imaging for Vegetation Monitoring, and Plant Phenotyping Using ICI 8640 P, FLIR Vue Pro R 640, and thermoMap Cameras
Sagan, Vasit, Maimaitijiang, Maitiniyazi, Sidike, Paheding, Eblimit, Kevin, Peterson, Kyle, Hartling, Sean, Esposito, Flavio, Khanal, Kapil, Newcomb, Maria, Pauli, Duke, Ward, Rick, Fritschi, Felix, Shakoor, Nadia, Mockler, Todd
Published in Remote sensing (Basel, Switzerland) (07.02.2019)
Published in Remote sensing (Basel, Switzerland) (07.02.2019)
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