Genomic variation landscape of the human gut microbiome
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Published in Nature (London) (03.01.2013)
Published in Nature (London) (03.01.2013)
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A systematic analysis of biosynthetic gene clusters in the human microbiome reveals a common family of antibiotics
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Published in PLoS computational biology (01.06.2012)
Published in PLoS computational biology (01.06.2012)
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Metabolic and metagenomic outcomes from early-life pulsed antibiotic treatment
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Published in Nature communications (30.06.2015)
Published in Nature communications (30.06.2015)
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Intestinal cell diversity and treatment responses in a parasitic nematode at single cell resolution
Tyagi, Rahul, Rosa, Bruce A, Swain, Amanda, Artyomov, Maxim N, Jasmer, Douglas P, Mitreva, Makedonka
Published in BMC genomics (04.04.2024)
Published in BMC genomics (04.04.2024)
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The prevalence of species and strains in the human microbiome: a resource for experimental efforts
Kraal, Laurens, Abubucker, Sahar, Kota, Karthik, Fischbach, Michael A, Mitreva, Makedonka
Published in PloS one (14.05.2014)
Published in PloS one (14.05.2014)
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Genomic introgression mapping of field-derived multiple-anthelmintic resistance in Teladorsagia circumcincta
Choi, Young-Jun, Bisset, Stewart A, Doyle, Stephen R, Hallsworth-Pepin, Kymberlie, Martin, John, Grant, Warwick N, Mitreva, Makedonka
Published in PLoS genetics (23.06.2017)
Published in PLoS genetics (23.06.2017)
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Poly(ADP-ribose) polymerase 9 mediates early protection against Mycobacterium tuberculosis infection by regulating type I IFN production
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Published in The Journal of clinical investigation (15.06.2023)
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Dynamic changes in the subgingival microbiome and their potential for diagnosis and prognosis of periodontitis
Shi, Baochen, Chang, Michaela, Martin, John, Mitreva, Makedonka, Lux, Renate, Klokkevold, Perry, Sodergren, Erica, Weinstock, George M, Haake, Susan K, Li, Huiying
Published in mBio (17.02.2015)
Published in mBio (17.02.2015)
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IFN signaling and neutrophil degranulation transcriptional signatures are induced during SARS-CoV-2 infection
Rosa, Bruce A, Ahmed, Mushtaq, Singh, Dhiraj K, Choreño-Parra, José Alberto, Cole, Journey, Jiménez-Álvarez, Luis Armando, Rodríguez-Reyna, Tatiana Sofía, Singh, Bindu, Gonzalez, Olga, Carrion, Jr, Ricardo, Schlesinger, Larry S, Martin, John, Zúñiga, Joaquín, Mitreva, Makedonka, Kaushal, Deepak, Khader, Shabaana A
Published in Communications biology (05.03.2021)
Published in Communications biology (05.03.2021)
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Genomes of Fasciola hepatica from the Americas Reveal Colonization with Neorickettsia Endobacteria Related to the Agents of Potomac Horse and Human Sennetsu Fevers
McNulty, Samantha N, Tort, Jose F, Rinaldi, Gabriel, Fischer, Kerstin, Rosa, Bruce A, Smircich, Pablo, Fontenla, Santiago, Choi, Young-Jun, Tyagi, Rahul, Hallsworth-Pepin, Kymberlie, Mann, Victoria H, Kammili, Lakshmi, Latham, Patricia S, Dell'Oca, Nicolas, Dominguez, Fernanda, Carmona, Carlos, Fischer, Peter U, Brindley, Paul J, Mitreva, Makedonka
Published in PLoS genetics (06.01.2017)
Published in PLoS genetics (06.01.2017)
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The identification of small molecule inhibitors with anthelmintic activities that target conserved proteins among ruminant gastrointestinal nematodes
Jung, Hyeim, Zarlenga, Dante, Martin, John C, Geldhof, Peter, Hallsworth-Pepin, Kymberlie, Mitreva, Makedonka
Published in mBio (13.03.2024)
Published in mBio (13.03.2024)
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The draft genome of the parasitic nematode Trichinella spiralis
Mitreva, Makedonka, Wilson, Richard K, Jasmer, Douglas P, Zarlenga, Dante S, Wang, Zhengyuan, Abubucker, Sahar, Martin, John, Taylor, Christina M, Yin, Yong, Fulton, Lucinda, Minx, Pat, Yang, Shiaw-Pyng, Warren, Wesley C, Fulton, Robert S, Bhonagiri, Veena, Zhang, Xu, Hallsworth-Pepin, Kym, Clifton, Sandra W, McCarter, James P, Appleton, Judith, Mardis, Elaine R
Published in Nature genetics (01.03.2011)
Published in Nature genetics (01.03.2011)
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Genome of the human hookworm Necator americanus
Tang, Yat T, Gao, Xin, Rosa, Bruce A, Abubucker, Sahar, Hallsworth-Pepin, Kymberlie, Martin, John, Tyagi, Rahul, Heizer, Esley, Zhang, Xu, Bhonagiri-Palsikar, Veena, Minx, Patrick, Warren, Wesley C, Wang, Qi, Zhan, Bin, Hotez, Peter J, Sternberg, Paul W, Dougall, Annette, Gaze, Soraya Torres, Mulvenna, Jason, Sotillo, Javier, Ranganathan, Shoba, Rabelo, Elida M, Wilson, Richard W, Felgner, Philip L, Bethony, Jeffrey, Hawdon, John M, Gasser, Robin B, Loukas, Alex, Mitreva, Makedonka
Published in Nature genetics (01.03.2014)
Published in Nature genetics (01.03.2014)
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Differential human gut microbiome assemblages during soil-transmitted helminth infections in Indonesia and Liberia
Rosa, Bruce A, Supali, Taniawati, Gankpala, Lincoln, Djuardi, Yenny, Sartono, Erliyani, Zhou, Yanjiao, Fischer, Kerstin, Martin, John, Tyagi, Rahul, Bolay, Fatorma K, Fischer, Peter U, Yazdanbakhsh, Maria, Mitreva, Makedonka
Published in Microbiome (28.02.2018)
Published in Microbiome (28.02.2018)
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Sheikh, Alaullah, Tumala, Brunda, Vickers, Tim J, Martin, John C, Rosa, Bruce A, Sabui, Subrata, Basu, Supratim, Simoes, Rita D, Mitreva, Makedonka, Storer, Chad, Tyksen, Erik, Head, Richard D, Beatty, Wandy, Said, Hamid M, Fleckenstein, James M
Published in Nature communications (12.11.2022)
Published in Nature communications (12.11.2022)
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Dynamic changes in human-gut microbiome in relation to a placebo-controlled anthelminthic trial in Indonesia
Martin, Ivonne, Djuardi, Yenny, Sartono, Erliyani, Rosa, Bruce A, Supali, Taniawati, Mitreva, Makedonka, Houwing-Duistermaat, Jeanine J, Yazdanbakhsh, Maria
Published in PLoS neglected tropical diseases (01.08.2018)
Published in PLoS neglected tropical diseases (01.08.2018)
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The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism
Wilson, Richard K, Sommer, Ralf J, Dieterich, Christoph, Clifton, Sandra W, Schuster, Lisa N, Chinwalla, Asif, Delehaunty, Kimberly, Dinkelacker, Iris, Fulton, Lucinda, Fulton, Robert, Godfrey, Jennifer, Minx, Pat, Mitreva, Makedonka, Roeseler, Waltraud, Tian, Huiyu, Witte, Hanh, Yang, Shiaw-Pyng
Published in Nature genetics (01.10.2008)
Published in Nature genetics (01.10.2008)
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Silencing of Germline-Expressed Genes by DNA Elimination in Somatic Cells
Wang, Jianbin, Mitreva, Makedonka, Berriman, Matthew, Thorne, Alicia, Magrini, Vincent, Koutsovoulos, Georgios, Kumar, Sujai, Blaxter, Mark L., Davis, Richard E.
Published in Developmental cell (13.11.2012)
Published in Developmental cell (13.11.2012)
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