Unabridged Analysis of Human Histone H3 by Differential Top-Down Mass Spectrometry Reveals Hypermethylated Proteoforms from MMSET/NSD2 Overexpression
Zheng, Yupeng, Fornelli, Luca, Compton, Philip D., Sharma, Seema, Canterbury, Jesse, Mullen, Christopher, Zabrouskov, Vlad, Fellers, Ryan T., Thomas, Paul M., Licht, Jonathan D., Senko, Michael W., Kelleher, Neil L.
Published in Molecular & cellular proteomics (01.03.2016)
Published in Molecular & cellular proteomics (01.03.2016)
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Novel Linear Quadrupole Ion Trap/FT Mass Spectrometer: Performance Characterization and Use in the Comparative Analysis of Histone H3 Post-translational Modifications
Syka, John E. P, Marto, Jarrod A, Bai, Dina L, Horning, Stevan, Senko, Michael W, Schwartz, Jae C, Ueberheide, Beatrix, Garcia, Benjamin, Busby, Scott, Muratore, Tara, Shabanowitz, Jeffrey, Hunt, Donald F
Published in Journal of proteome research (01.05.2004)
Published in Journal of proteome research (01.05.2004)
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Multiplexed mass spectrometry of individual ions improves measurement of proteoforms and their complexes
Kafader, Jared O., Melani, Rafael D., Durbin, Kenneth R., Ikwuagwu, Bon, Early, Bryan P., Fellers, Ryan T., Beu, Steven C., Zabrouskov, Vlad, Makarov, Alexander A., Maze, Joshua T., Shinholt, Deven L., Yip, Ping F., Tullman-Ercek, Danielle, Senko, Michael W., Compton, Philip D., Kelleher, Neil L.
Published in Nature methods (01.04.2020)
Published in Nature methods (01.04.2020)
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Measurement of Individual Ions Sharply Increases the Resolution of Orbitrap Mass Spectra of Proteins
Kafader, Jared O, Melani, Rafael D, Senko, Michael W, Makarov, Alexander A, Kelleher, Neil L, Compton, Philip D
Published in Analytical chemistry (Washington) (19.02.2019)
Published in Analytical chemistry (Washington) (19.02.2019)
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Novel Parallelized Quadrupole/Linear Ion Trap/Orbitrap Tribrid Mass Spectrometer Improving Proteome Coverage and Peptide Identification Rates
Senko, Michael W, Remes, Philip M, Canterbury, Jesse D, Mathur, Raman, Song, Qingyu, Eliuk, Shannon M, Mullen, Chris, Earley, Lee, Hardman, Mark, Blethrow, Justin D, Bui, Huy, Specht, August, Lange, Oliver, Denisov, Eduard, Makarov, Alexander, Horning, Stevan, Zabrouskov, Vlad
Published in Analytical chemistry (Washington) (17.12.2013)
Published in Analytical chemistry (Washington) (17.12.2013)
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External Accumulation of Ions for Enhanced Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry
Senko, Michael W, Hendrickson, Christopher L, Emmett, Mark R, Shi, Stone D.-H, Marshall, Alan G
Published in Journal of the American Society for Mass Spectrometry (01.09.1997)
Published in Journal of the American Society for Mass Spectrometry (01.09.1997)
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Novel Real-Time Library Search Driven Data Acquisition Strategy for Identification and Characterization of Metabolites
Bills, Brandon, Barshop, William D, Sharma, Seema, Canterbury, Jesse, Robitaille, Aaron M, Goodwin, Michael, Senko, Michael W, Zabrouskov, Vlad
Published in Analytical chemistry (Washington) (08.03.2022)
Published in Analytical chemistry (Washington) (08.03.2022)
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Isotopic Resolution of Protein Complexes up to 466 kDa Using Individual Ion Mass Spectrometry
McGee, John P, Melani, Rafael D, Yip, Ping F, Senko, Michael W, Compton, Philip D, Kafader, Jared O, Kelleher, Neil L
Published in Analytical chemistry (Washington) (09.02.2021)
Published in Analytical chemistry (Washington) (09.02.2021)
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Evaluating the Performance of the Astral Mass Analyzer for Quantitative Proteomics Using Data-Independent Acquisition
Heil, Lilian R., Damoc, Eugen, Arrey, Tabiwang N., Pashkova, Anna, Denisov, Eduard, Petzoldt, Johannes, Peterson, Amelia C., Hsu, Chris, Searle, Brian C., Shulman, Nicholas, Riffle, Michael, Connolly, Brian, MacLean, Brendan X., Remes, Philip M., Senko, Michael W., Stewart, Hamish I., Hock, Christian, Makarov, Alexander A., Hermanson, Daniel, Zabrouskov, Vlad, Wu, Christine C., MacCoss, Michael J.
Published in Journal of proteome research (06.10.2023)
Published in Journal of proteome research (06.10.2023)
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Improved Signal Processing for Mass Shifting Ions in Charge Detection Mass Spectrometry
Goodwin, Michael P., Grinfeld, Dmitry, Yip, Ping, Bowen, Kyle P., Kafader, Jared O., Kelleher, Neil L., Senko, Michael W.
Published in Journal of the American Society for Mass Spectrometry (03.04.2024)
Published in Journal of the American Society for Mass Spectrometry (03.04.2024)
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Determining Collisional Cross Sections from Ion Decay with Individual Ion Mass Spectrometry
Fisher, Nickolas P, McGee, John P, Bowen, Kyle P, Goodwin, Michael, Senko, Michael W, Kelleher, Neil L, Kafader, Jared O
Published in Journal of the American Society for Mass Spectrometry (06.12.2023)
Published in Journal of the American Society for Mass Spectrometry (06.12.2023)
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Individual Ion Mass Spectrometry Enhances the Sensitivity and Sequence Coverage of Top-Down Mass Spectrometry
Kafader, Jared O, Durbin, Kenneth R, Melani, Rafael D, Des Soye, Benjamin J, Schachner, Luis F, Senko, Michael W, Compton, Philip D, Kelleher, Neil L
Published in Journal of proteome research (06.03.2020)
Published in Journal of proteome research (06.03.2020)
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Automated Control of Injection Times for Unattended Acquisition of Multiplexed Individual Ion Mass Spectra
McGee, John P., Senko, Michael W., Jooß, Kevin, Des Soye, Benjamin J., Compton, Philip D., Kelleher, Neil L., Kafader, Jared O.
Published in Analytical chemistry (Washington) (06.12.2022)
Published in Analytical chemistry (Washington) (06.12.2022)
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Evaluation of the Orbitrap Ascend Tribrid Mass Spectrometer for Shotgun Proteomics
He, Yuchen, Shishkova, Evgenia, Peters-Clarke, Trenton M., Brademan, Dain R., Westphall, Michael S., Bergen, David, Huang, Jingjing, Huguet, Romain, Senko, Michael W., Zabrouskov, Vlad, McAlister, Graeme C., Coon, Joshua J.
Published in Analytical chemistry (Washington) (18.07.2023)
Published in Analytical chemistry (Washington) (18.07.2023)
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STORI Plots Enable Accurate Tracking of Individual Ion Signals
Kafader, Jared O., Beu, Steven C., Early, Bryan P., Melani, Rafael D., Durbin, Kenneth R., Zabrouskov, Vlad, Makarov, Alexander A., Maze, Joshua T., Shinholt, Deven L., Yip, Ping F., Kelleher, Neil L., Compton, Philip D., Senko, Michael W.
Published in Journal of the American Society for Mass Spectrometry (01.11.2019)
Published in Journal of the American Society for Mass Spectrometry (01.11.2019)
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Voltage Rollercoaster Filtering of Low-Mass Contaminants During Native Protein Analysis
McGee, John P, Melani, Rafael D, Goodwin, Michael, McAlister, Graeme, Huguet, Romain, Senko, Michael W, Compton, Philip D, Kelleher, Neil L
Published in Journal of the American Society for Mass Spectrometry (04.03.2020)
Published in Journal of the American Society for Mass Spectrometry (04.03.2020)
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Enhanced Dissociation of Intact Proteins with High Capacity Electron Transfer Dissociation
Riley, Nicholas M., Mullen, Christopher, Weisbrod, Chad R., Sharma, Seema, Senko, Michael W., Zabrouskov, Vlad, Westphall, Michael S., Syka, John E. P., Coon, Joshua J.
Published in Journal of the American Society for Mass Spectrometry (01.03.2016)
Published in Journal of the American Society for Mass Spectrometry (01.03.2016)
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