ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments
Lachmann, Alexander, Xu, Huilei, Krishnan, Jayanth, Berger, Seth I., Mazloom, Amin R., Ma'ayan, Avi
Published in Bioinformatics (01.10.2010)
Published in Bioinformatics (01.10.2010)
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Journal Article
Clinical validation of a noninvasive prenatal test for genomewide detection of fetal copy number variants
Lefkowitz, Roy B., PhD, Tynan, John A., PhD, Liu, Tong, PhD, Wu, Yijin, PhD, Mazloom, Amin R., PhD, Almasri, Eyad, MS, Hogg, Grant, MS, Angkachatchai, Vach, PhD, Zhao, Chen, PhD, Grosu, Daniel S., MD, McLennan, Graham, MS, Ehrich, Mathias, MD
Published in American journal of obstetrics and gynecology (01.08.2016)
Published in American journal of obstetrics and gynecology (01.08.2016)
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Journal Article
Mesenchymal and haematopoietic stem cells form a unique bone marrow niche
MacArthur, Ben D, Scadden, David T, Enikolopov, Grigori N, Méndez-Ferrer, Simón, Ma'ayan, Avi, Frenette, Paul S, Lira, Sergio A, Michurina, Tatyana V, Ferraro, Francesca, Mazloom, Amin R
Published in Nature (London) (12.08.2010)
Published in Nature (London) (12.08.2010)
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Journal Article
Non-invasive prenatal chromosomal aneuploidy testing--clinical experience: 100,000 clinical samples
McCullough, Ron M, Almasri, Eyad A, Guan, Xiaojun, Geis, Jennifer A, Hicks, Susan C, Mazloom, Amin R, Deciu, Cosmin, Oeth, Paul, Bombard, Allan T, Paxton, Bill, Dharajiya, Nilesh, Saldivar, Juan-Sebastian
Published in PloS one (07.10.2014)
Published in PloS one (07.10.2014)
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Journal Article
Determination of fetal DNA fraction from the plasma of pregnant women using sequence read counts
Kim, Sung K., Hannum, Gregory, Geis, Jennifer, Tynan, John, Hogg, Grant, Zhao, Chen, Jensen, Taylor J., Mazloom, Amin R., Oeth, Paul, Ehrich, Mathias, van den Boom, Dirk, Deciu, Cosmin
Published in Prenatal diagnosis (01.08.2015)
Published in Prenatal diagnosis (01.08.2015)
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Journal Article
Noninvasive prenatal detection of sex chromosomal aneuploidies by sequencing circulating cell-free DNA from maternal plasma
Mazloom, Amin R., Džakula, Željko, Oeth, Paul, Wang, Huiquan, Jensen, Taylor, Tynan, John, McCullough, Ron, Saldivar, Juan-Sebastian, Ehrich, Mathias, van den Boom, Dirk, Bombard, Allan T., Maeder, Margo, McLennan, Graham, Meschino, Wendy, Palomaki, Glenn E., Canick, Jacob A., Deciu, Cosmin
Published in Prenatal diagnosis (01.06.2013)
Published in Prenatal diagnosis (01.06.2013)
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Journal Article
High-throughput massively parallel sequencing for fetal aneuploidy detection from maternal plasma
Jensen, Taylor J, Zwiefelhofer, Tricia, Tim, Roger C, Džakula, Željko, Kim, Sung K, Mazloom, Amin R, Zhu, Zhanyang, Tynan, John, Lu, Tim, McLennan, Graham, Palomaki, Glenn E, Canick, Jacob A, Oeth, Paul, Deciu, Cosmin, van den Boom, Dirk, Ehrich, Mathias
Published in PloS one (06.03.2013)
Published in PloS one (06.03.2013)
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Journal Article
Activation of alternate prosurvival pathways accounts for acquired sunitinib resistance in U87MG glioma xenografts
Zhou, Qingyu, Lv, Hua, Mazloom, Amin R, Xu, Huilei, Ma'ayan, Avi, Gallo, James M
Published in The Journal of pharmacology and experimental therapeutics (01.11.2012)
Published in The Journal of pharmacology and experimental therapeutics (01.11.2012)
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Journal Article
Esrrb Regulates Specific Feed-Forward Loops to Transit From Pluripotency Into Early Stages of Differentiation
Mazloom, Amin R, Xu, Huilei, Reig-Palou, Jaume, Vasileva, Ana, Román, Angel-Carlos, Mulero-Navarro, Sonia, Lemischka, Ihor R, Sevilla, Ana
Published in Frontiers in cell and developmental biology (16.05.2022)
Published in Frontiers in cell and developmental biology (16.05.2022)
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Journal Article
An Esrrb and Nanog Cell Fate Regulatory Module Controlled by Feed Forward Loop Interactions
Sevilla, Ana, Papatsenko, Dimitri, Mazloom, Amin R, Xu, Huilei, Vasileva, Ana, Unwin, Richard D, LeRoy, Gary, Chen, Edward Y, Garrett-Bakelman, Francine E, Lee, Dung-Fang, Trinite, Benjamin, Webb, Ryan L, Wang, Zichen, Su, Jie, Gingold, Julian, Melnick, Ari, Garcia, Benjamin A, Whetton, Anthony D, MacArthur, Ben D, Ma'ayan, Avi, Lemischka, Ihor R
Published in Frontiers in cell and developmental biology (19.03.2021)
Published in Frontiers in cell and developmental biology (19.03.2021)
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Journal Article
Recovering protein-protein and domain-domain interactions from aggregation of IP-MS proteomics of coregulator complexes
Mazloom, Amin R, Dannenfelser, Ruth, Clark, Neil R, Grigoryan, Arsen V, Linder, Kathryn M, Cardozo, Timothy J, Bond, Julia C, Boran, Aislyn D W, Iyengar, Ravi, Malovannaya, Anna, Lanz, Rainer B, Ma'ayan, Avi
Published in PLoS computational biology (01.12.2011)
Published in PLoS computational biology (01.12.2011)
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Journal Article
Genome-wide sequencing of cell-free DNA identifies copy number alterations that can be used for monitoring response to immunotherapy in cancer patients
Jensen, Taylor J, Goodman, Aaron M, Kato, Shumei, Ellison, Christopher K, Daniels, Gregory A, Kim, Lisa, Nakashe, Prachi, McCarthy, Erin, Mazloom, Amin R, McLennan, Graham, Grosu, Daniel S, Ehrich, Mathias, Kurzrock, Razelle
Published in Molecular cancer therapeutics (01.02.2019)
Published in Molecular cancer therapeutics (01.02.2019)
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Journal Article
A systems approach identifies HIPK2 as a key regulator of kidney fibrosis
Jin, Yuanmeng, Ratnam, Krishna, Chuang, Peter Y, Fan, Ying, Zhong, Yifei, Dai, Yan, Mazloom, Amin R, Chen, Edward Y, D'Agati, Vivette, Xiong, Huabao, Ross, Michael J, Chen, Nan, Ma'ayan, Avi, He, John Cijiang
Published in Nature medicine (01.04.2012)
Published in Nature medicine (01.04.2012)
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Journal Article
Analytical validation of a novel panel of biomarkers for a test for preeclampsia
Hendershot, Jenna M., Abbasi, Mohammad, Fortier, Laura, Benn, Maleah, Giacobone, Camille, Del Mastro, Richard, Bahrami-Samani, Emad, Mazloom, Amin R., Oberoi, Pankaj
Published in Journal of pharmaceutical and biomedical analysis (30.05.2022)
Published in Journal of pharmaceutical and biomedical analysis (30.05.2022)
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Journal Article
Genome-wide Sequencing of Cell-free DNA Enables Detection of Copy-number Alterations in Patients with Cancer Where Tissue Biopsy is Not Feasible
Jensen, Taylor J, Goodman, Aaron M, Ellison, Christopher K, Holden, Kimberly A, Kato, Shumei, Kim, Lisa, Daniels, Gregory A, Fitzgerald, Kerry, McCarthy, Erin, Nakashe, Prachi, Mazloom, Amin R, Almasri, Eyad, McLennan, Graham, Grosu, Daniel S, Eisenberg, Marcia, Kurzrock, Razelle
Published in Molecular cancer therapeutics (01.11.2021)
Published in Molecular cancer therapeutics (01.11.2021)
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Journal Article
Publisher Correction: A systems approach identifies HIPK2 as a key regulator of kidney fibrosis
Jin, Yuanmeng, Ratnam, Krishna, Chuang, Peter Y, Fan, Ying, Zhong, Yifei, Dai, Yan, Mazloom, Amin R
Published in Nature medicine (01.08.2021)
Published in Nature medicine (01.08.2021)
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Journal Article
ELK1 Transcription Factor Linked to Dysregulated Striatal Mu Opioid Receptor Signaling Network and OPRM1 Polymorphism in Human Heroin Abusers
Sillivan, Stephanie E, Whittard, John D, Jacobs, Michelle M, Ren, Yanhua, Mazloom, Amin R, Caputi, Francesca F, Horvath, Monika, Keller, Eva, Ma’ayan, Avi, Pan, Ying-Xian, Chiang, Lillian W, Hurd, Yasmin L
Published in Biological psychiatry (1969) (01.10.2013)
Published in Biological psychiatry (1969) (01.10.2013)
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Journal Article
Using Targeted Sequencing of Paralogous Sequences for Noninvasive Detection of Selected Fetal Aneuploidies
Ellison, Christopher K, Sun, Youting, Hogg, Grant, Fox, Jesse, Tao, Helen, McCarthy, Erin, Sagoe, Bright, Azab, Mostafa A, Mazloom, Amin R, Tynan, John, Burcham, Timothy, Kim, Sung K, van den Boom, Dirk, Ehrich, Mathias, Jensen, Taylor J
Published in Clinical chemistry (Baltimore, Md.) (01.12.2016)
Published in Clinical chemistry (Baltimore, Md.) (01.12.2016)
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Journal Article
CoCONet: A collision-free container-based core optical network
Mazloom, Amin R., Ghosh, Preetam, Basu, Kalyan, Das, Sajal K.
Published in Computer networks (Amsterdam, Netherlands : 1999) (16.07.2008)
Published in Computer networks (Amsterdam, Netherlands : 1999) (16.07.2008)
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Journal Article
Chromatin remodeling in silico: A stochastic model for SWI/SNF
Mazloom, Amin R., Basu, Kalyan, Mandal, Subhrangsu S., Das, Sajal K.
Published in BioSystems (01.03.2010)
Published in BioSystems (01.03.2010)
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