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García-Álvarez, Laura, PhD, Holden, Matthew TG, PhD, Lindsay, Heather, BSc, Webb, Cerian R, PhD, Brown, Derek FJ, PhD, Curran, Martin D, PhD, Walpole, Enid, FIMLS, Brooks, Karen, BSc, Pickard, Derek J, PhD, Teale, Christopher, MRCVS, Parkhill, Julian, Prof, Bentley, Stephen D, PhD, Edwards, Giles F, FRCPath, Girvan, E Kirsty, MSc, Kearns, Angela M, PhD, Pichon, Bruno, PhD, Hill, Robert LR, PhD, Larsen, Anders Rhod, PhD, Skov, Robert L, MD, Peacock, Sharon J, Prof, Maskell, Duncan J, Prof, Holmes, Mark A, Dr
Published in The Lancet infectious diseases (01.08.2011)
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Phylogenetic analyses and antimicrobial resistance profiles of Campylobacter spp. from diarrhoeal patients and chickens in Botswana
de Vries, Stefan P W, Vurayai, Moses, Holmes, Mark, Gupta, Srishti, Bateman, Michael, Goldfarb, David, Maskell, Duncan J, Matsheka, Maitshwarelo Ignatius, Grant, Andrew J
Published in PloS one (21.03.2018)
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Comprehensive assignment of roles for Salmonella typhimurium genes in intestinal colonization of food-producing animals
Chaudhuri, Roy R, Morgan, Eirwen, Peters, Sarah E, Pleasance, Stephen J, Hudson, Debra L, Davies, Holly M, Wang, Jinhong, van Diemen, Pauline M, Buckley, Anthony M, Bowen, Alison J, Pullinger, Gillian D, Turner, Daniel J, Langridge, Gemma C, Turner, A Keith, Parkhill, Julian, Charles, Ian G, Maskell, Duncan J, Stevens, Mark P
Published in PLoS genetics (01.04.2013)
Published in PLoS genetics (01.04.2013)
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A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi
Perkins, Timothy T, Kingsley, Robert A, Fookes, Maria C, Gardner, Paul P, James, Keith D, Yu, Lu, Assefa, Samuel A, He, Miao, Croucher, Nicholas J, Pickard, Derek J, Maskell, Duncan J, Parkhill, Julian, Choudhary, Jyoti, Thomson, Nicholas R, Dougan, Gordon
Published in PLoS genetics (01.07.2009)
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Patterns of genome evolution that have accompanied host adaptation in Salmonella
Langridge, Gemma C, Fookes, Maria, Connor, Thomas R, Feltwell, Theresa, Feasey, Nicholas, Parsons, Bryony N, Seth-Smith, Helena M B, Barquist, Lars, Stedman, Anna, Humphrey, Tom, Wigley, Paul, Peters, Sarah E, Maskell, Duncan J, Corander, Jukka, Chabalgoity, Jose A, Barrow, Paul, Parkhill, Julian, Dougan, Gordon, Thomson, Nicholas R
Published in Proceedings of the National Academy of Sciences - PNAS (20.01.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (20.01.2015)
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Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH)
Chaudhuri, Roy R, Allen, Andrew G, Owen, Paul J, Shalom, Gil, Stone, Karl, Harrison, Marcus, Burgis, Timothy A, Lockyer, Michael, Garcia-Lara, Jorge, Foster, Simon J, Pleasance, Stephen J, Peters, Sarah E, Maskell, Duncan J, Charles, Ian G
Published in BMC genomics (01.07.2009)
Published in BMC genomics (01.07.2009)
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Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants
Langridge, Gemma C, Phan, Minh-Duy, Turner, Daniel J, Perkins, Timothy T, Parts, Leopold, Haase, Jana, Charles, Ian, Maskell, Duncan J, Peters, Sarah E, Dougan, Gordon, Wain, John, Parkhill, Julian, Turner, A Keith
Published in Genome research (01.12.2009)
Published in Genome research (01.12.2009)
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Modelling within-host spatiotemporal dynamics of invasive bacterial disease
Grant, Andrew J, Restif, Olivier, McKinley, Trevelyan J, Sheppard, Mark, Maskell, Duncan J, Mastroeni, Pietro
Published in PLoS biology (01.04.2008)
Published in PLoS biology (01.04.2008)
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Overexpression of antibiotic resistance genes in hospital effluents over time
Rowe, Will P M, Baker-Austin, Craig, Verner-Jeffreys, David W, Ryan, Jim J, Micallef, Christianne, Maskell, Duncan J, Pearce, Gareth P
Published in Journal of antimicrobial chemotherapy (01.06.2017)
Published in Journal of antimicrobial chemotherapy (01.06.2017)
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Prevalence, antimicrobial resistance and genomic comparison of non-typhoidal salmonella isolated from pig farms with different levels of intensification in Yangon Region, Myanmar
Trung, Nguyen Vinh, Zaw Moe, Aung, May Than, Hlaing, Bich Chieu, Tran Thi, Mukarram Hossain, A S Md, Trung Thanh, Nguyen, Yen, Huynh Xuan, Yen, Phung Le Kim, Nghia, Nguyen Huu, Murray, Gemma G R, Su Wai, Thiri, Thein Maw, Min, Myint, Hnin Thidar, Win, Ye Tun, Wood, James, Thwaites, Guy, Maskell, Duncan J, Tucker, Alexander W, Hoa, Ngo Thi
Published in PloS one (19.09.2024)
Published in PloS one (19.09.2024)
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The effects of vaccination and immunity on bacterial infection dynamics in vivo
Coward, Chris, Restif, Olivier, Dybowski, Richard, Grant, Andrew J, Maskell, Duncan J, Mastroeni, Pietro
Published in PLoS pathogens (01.09.2014)
Published in PLoS pathogens (01.09.2014)
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Proposal of serovars 17 and 18 of Actinobacillus pleuropneumoniae based on serological and genotypic analysis
Bossé, Janine T., Li, Yanwen, Sárközi, Rita, Fodor, László, Lacouture, Sonia, Gottschalk, Marcelo, Casas Amoribieta, Maria, Angen, Øystein, Nedbalcova, Katerina, Holden, Matthew T.G., Maskell, Duncan J., Tucker, Alexander W., Wren, Brendan W., Rycroft, Andrew N., Langford, Paul R.
Published in Veterinary microbiology (01.04.2018)
Published in Veterinary microbiology (01.04.2018)
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High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi
Holt, Kathryn E, Weill, François-Xavier, Goodhead, Ian, Wain, John, Rance, Richard, Parkhill, Julian, Dolecek, Christiane, Roumagnac, Philippe, Achtman, Mark, Mazzoni, Camila J, Maskell, Duncan J, Baker, Stephen, Dougan, Gordon
Published in Nature genetics (01.08.2008)
Published in Nature genetics (01.08.2008)
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Attenuated Salmonella Typhimurium lacking the pathogenicity island-2 type 3 secretion system grow to high bacterial numbers inside phagocytes in mice
Grant, Andrew J, Morgan, Fiona J E, McKinley, Trevelyan J, Foster, Gemma L, Maskell, Duncan J, Mastroeni, Pietro
Published in PLoS pathogens (01.12.2012)
Published in PLoS pathogens (01.12.2012)
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Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis
Weinert, Lucy A., Chaudhuri, Roy R., Wang, Jinhong, Peters, Sarah E., Corander, Jukka, Jombart, Thibaut, Baig, Abiyad, Howell, Kate J., Vehkala, Minna, Välimäki, Niko, Harris, David, Chieu, Tran Thi Bich, Van Vinh Chau, Nguyen, Campbell, James, Schultsz, Constance, Parkhill, Julian, Bentley, Stephen D., Langford, Paul R., Rycroft, Andrew N., Wren, Brendan W., Farrar, Jeremy, Baker, Stephen, Hoa, Ngo Thi, Holden, Matthew T.G., Tucker, Alexander W., Maskell, Duncan J.
Published in Nature communications (31.03.2015)
Published in Nature communications (31.03.2015)
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Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens
Holden, Matthew T G, Heather, Zoe, Paillot, Romain, Steward, Karen F, Webb, Katy, Ainslie, Fern, Jourdan, Thibaud, Bason, Nathalie C, Holroyd, Nancy E, Mungall, Karen, Quail, Michael A, Sanders, Mandy, Simmonds, Mark, Willey, David, Brooks, Karen, Aanensen, David M, Spratt, Brian G, Jolley, Keith A, Maiden, Martin C J, Kehoe, Michael, Chanter, Neil, Bentley, Stephen D, Robinson, Carl, Maskell, Duncan J, Parkhill, Julian, Waller, Andrew S
Published in PLoS pathogens (01.03.2009)
Published in PLoS pathogens (01.03.2009)
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Development of a Multiplex PCR Assay for Rapid Molecular Serotyping of Haemophilus parasuis
Howell, Kate J, Peters, Sarah E, Wang, Jinhong, Hernandez-Garcia, Juan, Weinert, Lucy A, Luan, Shi-Lu, Chaudhuri, Roy R, Angen, Øystein, Aragon, Virginia, Williamson, Susanna M, Parkhill, Julian, Langford, Paul R, Rycroft, Andrew N, Wren, Brendan W, Maskell, Duncan J, Tucker, Alexander W
Published in Journal of clinical microbiology (01.12.2015)
Published in Journal of clinical microbiology (01.12.2015)
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Comparative sequence analysis of the capsular polysaccharide loci of Actinobacillus pleuropneumoniae serovars 1–18, and development of two multiplex PCRs for comprehensive capsule typing
Bossé, Janine T., Li, Yanwen, Fernandez Crespo, Roberto, Lacouture, Sonia, Gottschalk, Marcelo, Sárközi, Rita, Fodor, László, Casas Amoribieta, Maria, Angen, Øystein, Nedbalcova, Katerina, Holden, Matthew T.G., Maskell, Duncan J., Tucker, Alexander W., Wren, Brendan W., Rycroft, Andrew N., Langford, Paul R.
Published in Veterinary microbiology (01.07.2018)
Published in Veterinary microbiology (01.07.2018)
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