Deep and wide digging for binding motifs in ChIP-Seq data
Kulakovskiy, I. V., Boeva, V. A., Favorov, A. V., Makeev, V. J.
Published in Bioinformatics (15.10.2010)
Published in Bioinformatics (15.10.2010)
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A deeper look into transcription regulatory code by preferred pair distance templates for transcription factor binding sites
Kulakovskiy, I. V., Belostotsky, A. A., Kasianov, A. S., Esipova, N. G., Medvedeva, Y. A., Eliseeva, I. A., Makeev, V. J.
Published in Bioinformatics (01.10.2011)
Published in Bioinformatics (01.10.2011)
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Journal Article
Assessing computational tools for the discovery of transcription factor binding sites
Eskin, Eleazar, Ye, Chun, Mironov, Andrei A, Fu, Yutao, Favorov, Alexander V, Pavesi, Giulio, Li, Nan, Pesole, Graziano, Vandenbogaert, Mathias, Noble, William Stafford, Weng, Zhiping, Régnier, Mireille, Sinha, Saurabh, Makeev, Vsevolod J, Kent, W James, De Moor, Bart, Simonis, Nicolas, Zhu, Zhou, Thijs, Gert, Bailey, Timothy L, Frith, Martin C, Workman, Christopher, Church, George M, Tompa, Martin, van Helden, Jacques
Published in Nature biotechnology (01.01.2005)
Published in Nature biotechnology (01.01.2005)
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Journal Article
Homotypic regulatory clusters in Drosophila
Lifanov, Alexander P, Makeev, Vsevolod J, Nazina, Anna G, Papatsenko, Dmitri A
Published in Genome research (01.04.2003)
Published in Genome research (01.04.2003)
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Journal Article
The Efficiency of 5-Methylcytosine Identification in DNA of Escherichia coli Cells that Carry Bacterial DNA Methyltransferase Genes Using an Oxford Nanopore Device
Ilinsky, V. V., Kozlova, E. M., Degtyarev, S. Kh, Yankovsky, N. K., Makeev, V. J.
Published in Biophysics (Oxford) (2020)
Published in Biophysics (Oxford) (2020)
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Journal Article
Preferred distances between transcription factor binding sites
Kulakovskiy, I. V., Kasianov, A. S., Belostotsky, A. A., Eliseeva, I. A., Makeev, V. J.
Published in Biophysics (Oxford) (01.02.2011)
Published in Biophysics (Oxford) (01.02.2011)
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Journal Article
Cis-Regulatory Modules: Identification in silico and Understanding of Gene Regulatory Networks
Kulakovskiy, I V, Medvedeva, YA, Makeev, V J
Published in Journal of biomolecular structure & dynamics (01.06.2011)
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Published in Journal of biomolecular structure & dynamics (01.06.2011)
Journal Article
Ability of human monocytes to activate in atherosclerosis
Nikiforov, N G, Makeev, V J, Elizova, N V, Orekhov, A N
Published in Patologicheskaia fiziologiia i eksperimental'naia terapiia (01.07.2015)
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Published in Patologicheskaia fiziologiia i eksperimental'naia terapiia (01.07.2015)
Journal Article
In vitro selection of optimal RelB/p52 DNA-binding motifs
Britanova, Liudmila V., Makeev, Vsevolod J., Kuprash, Dmitry V.
Published in Biochemical and biophysical research communications (18.01.2008)
Published in Biochemical and biophysical research communications (18.01.2008)
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