A 17-gene Assay to Predict Prostate Cancer Aggressiveness in the Context of Gleason Grade Heterogeneity, Tumor Multifocality, and Biopsy Undersampling
Klein, Eric A, Cooperberg, Matthew R, Magi-Galluzzi, Cristina, Simko, Jeffry P, Falzarano, Sara M, Maddala, Tara, Chan, June M, Li, Jianbo, Cowan, Janet E, Tsiatis, Athanasios C, Cherbavaz, Diana B, Pelham, Robert J, Tenggara-Hunter, Imelda, Baehner, Frederick L, Knezevic, Dejan, Febbo, Phillip G, Shak, Steven, Kattan, Michael W, Lee, Mark, Carroll, Peter R
Published in European urology (01.09.2014)
Published in European urology (01.09.2014)
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A 16-gene assay to predict recurrence after surgery in localised renal cell carcinoma: development and validation studies
Rini, Brian, Prof, Goddard, Audrey, PhD, Knezevic, Dejan, PhD, Maddala, Tara, PhD, Zhou, Ming, MD, Aydin, Hakan, MD, Campbell, Steven, MD, Elson, Paul, PhD, Koscielny, Serge, PhD, Lopatin, Margarita, MS, Svedman, Christer, MD, Martini, Jean-Francois, PhD, Williams, J Andrew, PhD, Verkarre, Virginie, MD, Radulescu, Camelia, MD, Neuzillet, Yann, MD, Hemmerlé, Isabelle, BS, Timsit, Marc Olivier, MD, Tsiatis, Athanasios C, MD, Bonham, Michael, MD, Lebret, Thierry, Prof, Mejean, Arnaud, Prof, Escudier, Bernard, MD
Published in The lancet oncology (01.06.2015)
Published in The lancet oncology (01.06.2015)
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Human Epidermal Growth Factor Receptor 2 Assessment in a Case-Control Study: Comparison of Fluorescence In Situ Hybridization and Quantitative Reverse Transcription Polymerase Chain Reaction Performed by Central Laboratories
BAEHNER, Frederick L, ACHACOSO, Ninah, MADDALA, Tara, SHAK, Steve, QUESENBERRY, Charles P, GOLDSTEIN, Lynn C, GOWN, Allen M, HABEL, Laurel A
Published in Journal of clinical oncology (01.10.2010)
Published in Journal of clinical oncology (01.10.2010)
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Estrogen- and Progesterone-Receptor Status in ECOG 2197: Comparison of Immunohistochemistry by Local and Central Laboratories and Quantitative Reverse Transcription Polymerase Chain Reaction by Central Laboratory
BADVE, Sunil S, BAEHNER, Frederick L, MARTINO, Silvana, DAVIDSON, Nancy E, SLEDGE, George W, GOLDSTEIN, Lori J, SPARANO, Joseph A, GRAY, Robert P, CHILDS, Barrett H, MADDALA, Tara, LIU, Mei-Lan, ROWLEY, Steve C, SHAK, Steven, PEREZ, Edith D, SHULMAN, Lawrence J
Published in Journal of clinical oncology (20.05.2008)
Published in Journal of clinical oncology (20.05.2008)
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BLOODPAC: Collaborating to chart a path towards blood‐based screening for early cancer detection
Clarke, Christina A., Lang, Kathryn, Putcha, Girish, Beer, Jonathan P., Champagne, Maude, Ferris, Andrea, Godsey, James H., Grossman, Robert L., Hoyos, Jody M., Johann, Donald J., Krunic, Nancy, Kuhn, Peter, Lee, Jerry S. H., Maddala, Tara, Mata, Marielena, McDole, Jeremiah, Perez, Omar, Scher, Howard, Stewart, Mark D., Bhan, Seema Singh, Zhang, Qu, Leiman, Lauren C.
Published in Clinical and translational science (01.01.2023)
Published in Clinical and translational science (01.01.2023)
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Genome-wide sequencing for early stage lung cancer detection from plasma cell-free DNA (cfDNA): The Circulating Cancer Genome Atlas (CCGA) study
Oxnard, Geoffrey R., Maddala, Tara, Hubbell, Earl, Aravanis, Alex, Zhang, Nan, Venn, Oliver, Valouev, Anton, Shen, Ling, Patel, Shilpen, Jamshidi, Arash, Jagadeesh, Karthik, Gross, Samuel, Filippova, Darya, Beausang, John F., Liu, Minetta C., Richards, Donald A., Plevritis, Sylvia, Williams, Richard Thomas, Hartman, Anne-Renee, Swanton, Charles
Published in Journal of clinical oncology (20.06.2018)
Published in Journal of clinical oncology (20.06.2018)
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Prevalence of clonal hematopoiesis of indeterminate potential (CHIP) measured by an ultra-sensitive sequencing assay: Exploratory analysis of the Circulating Cancer Genome Atlas (CCGA) study
Swanton, Charles, Venn, Oliver, Aravanis, Alex, Hubbell, Earl, Maddala, Tara, Beausang, John F., Filippova, Darya, Gross, Samuel, Jamshidi, Arash, Shen, Ling, Valouev, Anton, Zhang, Nan, Bolton, Kelly L, Yeatman, Timothy Joseph, Seiden, Michael, Oxnard, Geoffrey R., Liu, Minetta C., Williams, Richard Thomas, Hartman, Anne-Renee, Baselga, Jose
Published in Journal of clinical oncology (20.05.2018)
Published in Journal of clinical oncology (20.05.2018)
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Journal Article
Detection and characterization of lung cancer using cell-free DNA fragmentomes
Mathios, Dimitrios, Johansen, Jakob Sidenius, Cristiano, Stephen, Medina, Jamie E., Phallen, Jillian, Larsen, Klaus R., Bruhm, Daniel C., Niknafs, Noushin, Ferreira, Leonardo, Adleff, Vilmos, Chiao, Jia Yuee, Leal, Alessandro, Noe, Michael, White, James R., Arun, Adith S., Hruban, Carolyn, Annapragada, Akshaya V., Jensen, Sarah Østrup, Ørntoft, Mai-Britt Worm, Madsen, Anders Husted, Carvalho, Beatriz, de Wit, Meike, Carey, Jacob, Dracopoli, Nicholas C., Maddala, Tara, Fang, Kenneth C., Hartman, Anne-Renee, Forde, Patrick M., Anagnostou, Valsamo, Brahmer, Julie R., Fijneman, Remond J. A., Nielsen, Hans Jørgen, Meijer, Gerrit A., Andersen, Claus Lindbjerg, Mellemgaard, Anders, Bojesen, Stig E., Scharpf, Robert B., Velculescu, Victor E.
Published in Nature communications (20.08.2021)
Published in Nature communications (20.08.2021)
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High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants
Razavi, Pedram, Li, Bob T., Brown, David N., Jung, Byoungsok, Hubbell, Earl, Shen, Ronglai, Abida, Wassim, Juluru, Krishna, De Bruijn, Ino, Hou, Chenlu, Venn, Oliver, Lim, Raymond, Anand, Aseem, Maddala, Tara, Gnerre, Sante, Vijaya Satya, Ravi, Liu, Qinwen, Shen, Ling, Eattock, Nicholas, Yue, Jeanne, Blocker, Alexander W., Lee, Mark, Sehnert, Amy, Xu, Hui, Hall, Megan P., Santiago-Zayas, Angie, Novotny, William F., Isbell, James M., Rusch, Valerie W., Plitas, George, Heerdt, Alexandra S., Ladanyi, Marc, Hyman, David M., Jones, David R., Morrow, Monica, Riely, Gregory J., Scher, Howard I., Rudin, Charles M., Robson, Mark E., Diaz, Luis A., Solit, David B., Aravanis, Alexander M., Reis-Filho, Jorge S.
Published in Nature medicine (01.12.2019)
Published in Nature medicine (01.12.2019)
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Journal Article
A Biopsy-based 17-gene Genomic Prostate Score Predicts Recurrence After Radical Prostatectomy and Adverse Surgical Pathology in a Racially Diverse Population of Men with Clinically Low- and Intermediate-risk Prostate Cancer
Cullen, Jennifer, Rosner, Inger L, Brand, Timothy C, Zhang, Nan, Tsiatis, Athanasios C, Moncur, Joel, Ali, Amina, Chen, Yongmei, Knezevic, Dejan, Maddala, Tara, Lawrence, H. Jeffrey, Febbo, Phillip G, Srivastava, Shiv, Sesterhenn, Isabell A, McLeod, David G
Published in European urology (01.07.2015)
Published in European urology (01.07.2015)
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DELFI-L101: Development of a blood-based assay that evaluates cell-free DNA fragmentation patterns to detect lung cancer
Mazzone, Peter J., Work, Kyle, Velculescu, Victor E., Kotagiri, Sonali, Sun, Lee Ming, Dix, Daniel, Jakubowski, Debbie M, Leal, Alessandro, Bach, Peter Brian, Maddala, Tara
Published in Journal of clinical oncology (01.06.2022)
Published in Journal of clinical oncology (01.06.2022)
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Abstract 3372: Cell-free DNA (cfDNA) fragment length patterns of tumor- and blood-derived variants in participants with and without cancer
Hubbell, Earl, Maddala, Tara, Venn, Oliver, Scott, Eric, Tang, Susan, Shenoy, Archana, Aravanis, Alex
Published in Cancer research (Chicago, Ill.) (01.07.2019)
Published in Cancer research (Chicago, Ill.) (01.07.2019)
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Noninvasive stratification of nonalcoholic fatty liver disease by whole transcriptome cell-free mRNA characterization
Chalasani, Naga, Toden, Shusuke, Sninsky, John J, Rava, Richard P, Braun, Jerome V, Gawrieh, Samer, Zhuang, Jiali, Nerenberg, Michael, Quake, Stephen R, Maddala, Tara
Published in American journal of physiology: Gastrointestinal and liver physiology (01.04.2021)
Published in American journal of physiology: Gastrointestinal and liver physiology (01.04.2021)
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Validation of an Epigenetic Prognostic Assay to Accurately Risk-Stratify Patients with Barrett's Esophagus
Laun, Sarah E, Kann, Lisa, Braun, Jerome, Gilbert, Stacey, Lunz, Daniel, Pierre, Francia, Kalra, Andrew, Ma, Ke, Tsai, Hua-Ling, Wang, Hao, Jit, Simran, Cheng, Yulan, Ahmed, Yousra, Wang, Kenneth K, Leggett, Cadman L, Cellini, Ashley, Ioffe, Olga B, Zaidi, Ali H, Omstead, Ashten N, Jobe, Blair, Korman, Louis, Cornish, Drew, Zellenrath, Pauline, Spaander, Manon, Kuipers, Ernst, Perpetua, Lorrie, Greenwald, Bruce D, Maddala, Tara, Meltzer, Stephen J
Published in The American journal of gastroenterology (14.08.2024)
Published in The American journal of gastroenterology (14.08.2024)
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Journal Article
Validation of an Epigenetic Prognostic Assay to Accurately Risk-Stratify Patients With Barrett Esophagus
Laun, Sarah E., Kann, Lisa, Braun, Jerome, Gilbert, Stacey, Lunz, Daniel, Pierre, Francia, Kalra, Andrew, Ma, Ke, Tsai, Hua-Ling, Wang, Hao, Jit, Simran, Cheng, Yulan, Ahmed, Yousra, Wang, Kenneth K., Leggett, Cadman L., Cellini, Ashley, Ioffe, Olga B., Zaidi, Ali H., Omstead, Ashten N., Jobe, Blair, Korman, Louis, Cornish, Drew, Zellenrath, Pauline, Spaander, Manon, Kuipers, Ernst, Perpetua, Lorrie, Greenwald, Bruce D., Maddala, Tara, Meltzer, Stephen J.
Published in The American journal of gastroenterology (14.08.2024)
Published in The American journal of gastroenterology (14.08.2024)
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Cell-free DNA (cfDNA) fragmentomes predict tumor burden in metastatic colorectal cancer (mCRC)
Leal, Alessandro, van 't Erve, Iris, Lumbard, Keith, Keefer, Laurel, Carey, Jacob, Wu, Tony, Jakubowski, Debbie, Butler, Denise, Rongione, Michael, Chesnick, Bryan, Punt, Cornelis J. A., Meijer, Gerrit A., Dracopoli, Nicholas C, Maddala, Tara, Scharpf, Robert, Bach, Peter Brian, Velculescu, Victor E., Fijneman, Remond
Published in Journal of clinical oncology (01.06.2022)
Published in Journal of clinical oncology (01.06.2022)
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Journal Article
The 17-Gene Genomic Prostate Score Assay Predicts Outcome After Radical Prostatectomy Independent of PTEN Status
Magi-Galluzzi, Cristina, Isharwal, Sudhir, Falzarano, Sara M., Tsiatis, Athanasios, Dee, Anne, Maddala, Tara, Knezevic, Dejan, Febbo, Phillip G., Lawrence, Jeffrey, Klein, Eric A.
Published in Urology (Ridgewood, N.J.) (01.11.2018)
Published in Urology (Ridgewood, N.J.) (01.11.2018)
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Journal Article
Patient-specific Meta-analysis of 2 Clinical Validation Studies to Predict Pathologic Outcomes in Prostate Cancer Using the 17-Gene Genomic Prostate Score
Brand, Timothy C, Zhang, Nan, Crager, Michael R, Maddala, Tara, Dee, Anne, Sesterhenn, Isabell A, Simko, Jeffry P, Cooperberg, Matthew R, Srivastava, Shiv, Rosner, Inger L, Chan, June M, Febbo, Phillip G, Carroll, Peter R, Cullen, Jennifer, Lawrence, H. Jeffrey
Published in Urology (Ridgewood, N.J.) (01.03.2016)
Published in Urology (Ridgewood, N.J.) (01.03.2016)
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