Shared and Distinct Features of Human Milk and Infant Stool Viromes
Pannaraj, Pia S, Ly, Melissa, Cerini, Chiara, Saavedra, Monica, Aldrovandi, Grace M, Saboory, Abdul A, Johnson, Kevin M, Pride, David T
Published in Frontiers in microbiology (01.06.2018)
Published in Frontiers in microbiology (01.06.2018)
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Journal Article
Human oral viruses are personal, persistent and gender-consistent
Abeles, Shira R, Robles-Sikisaka, Refugio, Ly, Melissa, Lum, Andrew G, Salzman, Julia, Boehm, Tobias K, Pride, David T
Published in The ISME Journal (01.09.2014)
Published in The ISME Journal (01.09.2014)
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Journal Article
Effects of Long Term Antibiotic Therapy on Human Oral and Fecal Viromes
Abeles, Shira R, Ly, Melissa, Santiago-Rodriguez, Tasha M, Pride, David T
Published in PloS one (26.08.2015)
Published in PloS one (26.08.2015)
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Journal Article
Altered oral viral ecology in association with periodontal disease
Ly, Melissa, Abeles, Shira R, Boehm, Tobias K, Robles-Sikisaka, Refugio, Naidu, Mayuri, Santiago-Rodriguez, Tasha, Pride, David T
Published in mBio (20.05.2014)
Published in mBio (20.05.2014)
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Journal Article
The Virome of Cerebrospinal Fluid: Viruses Where We Once Thought There Were None
Ghose, Chandrabali, Ly, Melissa, Schwanemann, Leila K., Shin, Ji Hyun, Atab, Katayoon, Barr, Jeremy J., Little, Mark, Schooley, Robert T., Chopyk, Jessica, Pride, David T.
Published in Frontiers in microbiology (06.09.2019)
Published in Frontiers in microbiology (06.09.2019)
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Journal Article
Association between living environment and human oral viral ecology
Robles-Sikisaka, Refugio, Ly, Melissa, Boehm, Tobias, Naidu, Mayuri, Salzman, Julia, Pride, David T
Published in The ISME Journal (01.09.2013)
Published in The ISME Journal (01.09.2013)
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Journal Article
Common antibiotics, azithromycin and amoxicillin, affect gut metagenomics within a household
Chopyk, Jessica, Cobián Güemes, Ana Georgina, Ramirez-Sanchez, Claudia, Attai, Hedieh, Ly, Melissa, Jones, Marcus B, Liu, Roland, Liu, Chenyu, Yang, Kun, Tu, Xin M, Abeles, Shira R, Nelson, Karen, Pride, David T
Published in BMC microbiology (02.08.2023)
Published in BMC microbiology (02.08.2023)
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Journal Article
RNA-Seq Dissects Incomplete Activation of Phytoalexin Biosynthesis by the Soybean Transcription Factors GmMYB29A2 and GmNAC42-1
Lin, Jie, Monsalvo, Ivan, Ly, Melissa, Jahan, Md Asraful, Wi, Dasol, Martirosyan, Izabella, Kovinich, Nik
Published in Plants (Basel) (01.01.2023)
Published in Plants (Basel) (01.01.2023)
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Journal Article
Fecal Viral Community Responses to High-Fat Diet in Mice
Schulfer, Anjelique, Santiago-Rodriguez, Tasha M, Ly, Melissa, Borin, Joshua M, Chopyk, Jessica, Blaser, Martin J, Pride, David T
Published in mSphere (26.02.2020)
Published in mSphere (26.02.2020)
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Journal Article
Temporal variations in bacterial community diversity and composition throughout intensive care unit renovations
Chopyk, Jessica, Akrami, Kevan, Bavly, Tovia, Shin, Ji H, Schwanemann, Leila K, Ly, Melissa, Kalia, Richa, Xu, Ying, Kelley, Scott T, Malhotra, Atul, Torriani, Francesca J, Sweeney, Daniel A, Pride, David T
Published in Microbiome (08.06.2020)
Published in Microbiome (08.06.2020)
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Journal Article
Global transcription of CRISPR loci in the human oral cavity
Lum, Andrew G, Ly, Melissa, Santiago-Rodriguez, Tasha M, Naidu, Mayuri, Boehm, Tobias K, Pride, David T
Published in BMC genomics (21.05.2015)
Published in BMC genomics (21.05.2015)
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Journal Article
Conservation of streptococcal CRISPRs on human skin and saliva
Robles-Sikisaka, Refugio, Naidu, Mayuri, Ly, Melissa, Salzman, Julia, Abeles, Shira R, Boehm, Tobias K, Pride, David T
Published in BMC microbiology (06.06.2014)
Published in BMC microbiology (06.06.2014)
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Journal Article
VIPdb, a genetic Variant Impact Predictor Database
Hu, Zhiqiang, Yu, Changhua, Furutsuki, Mabel, Andreoletti, Gaia, Ly, Melissa, Hoskins, Roger, Adhikari, Aashish N., Brenner, Steven E.
Published in Human mutation (01.09.2019)
Published in Human mutation (01.09.2019)
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Journal Article
Soybean Hairy Root Transformation for the Analysis of Gene Function
Lin, Jie, Wi, Dasol, Ly, Melissa, Jahan, Md Asraful, Pullano, Sarah, Martirosyan, Izabella, Kovinich, Nik
Published in Journal of visualized experiments (05.05.2023)
Published in Journal of visualized experiments (05.05.2023)
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Journal Article
The human urine virome in association with urinary tract infections
Santiago-Rodriguez, Tasha M, Ly, Melissa, Bonilla, Natasha, Pride, David T
Published in Frontiers in microbiology (2015)
Published in Frontiers in microbiology (2015)
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Journal Article
Microbial diversity in individuals and their household contacts following typical antibiotic courses
Abeles, Shira R, Jones, Marcus B, Santiago-Rodriguez, Tasha M, Ly, Melissa, Klitgord, Niels, Yooseph, Shibu, Nelson, Karen E, Pride, David T
Published in Microbiome (30.07.2016)
Published in Microbiome (30.07.2016)
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Journal Article
Transcriptome analysis of bacteriophage communities in periodontal health and disease
Santiago-Rodriguez, Tasha M, Naidu, Mayuri, Abeles, Shira R, Boehm, Tobias K, Ly, Melissa, Pride, David T
Published in BMC genomics (28.07.2015)
Published in BMC genomics (28.07.2015)
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Journal Article
Transmission of viruses via our microbiomes
Ly, Melissa, Jones, Marcus B, Abeles, Shira R, Santiago-Rodriguez, Tasha M, Gao, Jonathan, Chan, Ivan C, Ghose, Chandrabali, Pride, David T
Published in Microbiome (02.12.2016)
Published in Microbiome (02.12.2016)
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Journal Article
A panel of diverse Pseudomonas aeruginosa clinical isolates for research and development
Lebreton, Francois, Snesrud, Erik, Hall, Lindsey, Mills, Emma, Galac, Madeline, Stam, Jason, Ong, Ana, Maybank, Rosslyn, Kwak, Yoon I, Johnson, Sheila, Julius, Michael, Ly, Melissa, Swierczewski, Brett, Waterman, Paige E, Hinkle, Mary, Jones, Anthony, Lesho, Emil, Bennett, Jason W, McGann, Patrick
Published in JAC-antimicrobial resistance (01.12.2021)
Published in JAC-antimicrobial resistance (01.12.2021)
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Journal Article
Chemostat culture systems support diverse bacteriophage communities from human feces
Santiago-Rodriguez, Tasha M, Ly, Melissa, Daigneault, Michelle C, Brown, Ian H L, McDonald, Julie A K, Bonilla, Natasha, Vercoe, Emma Allen, Pride, David T
Published in Microbiome (09.11.2015)
Published in Microbiome (09.11.2015)
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Journal Article