Antibiotics-induced monodominance of a novel gut bacterial order
Hildebrand, Falk, Moitinho-Silva, Lucas, Blasche, Sonja, Jahn, Martin T, Gossmann, Toni Ingolf, Huerta-Cepas, Jaime, Hercog, Rajna, Luetge, Mechthild, Bahram, Mohammad, Pryszlak, Anna, Alves, Renato J, Waszak, Sebastian M, Zhu, Ana, Ye, Lumeng, Costea, Paul Igor, Aalvink, Steven, Belzer, Clara, Forslund, Sofia K, Sunagawa, Shinichi, Hentschel, Ute, Merten, Christoph, Patil, Kiran Raosaheb, Benes, Vladimir, Bork, Peer
Published in Gut (01.10.2019)
Published in Gut (01.10.2019)
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Journal Article
Draft genome sequence analysis of a Pseudomonas putida W15Oct28 strain with antagonistic activity to Gram-positive and Pseudomonas sp. pathogens
Ye, Lumeng, Hildebrand, Falk, Dingemans, Jozef, Ballet, Steven, Laus, George, Matthijs, Sandra, Berendsen, Roeland, Cornelis, Pierre
Published in PloS one (04.11.2014)
Published in PloS one (04.11.2014)
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Journal Article
Origin and functional diversification of an amphibian defense peptide arsenal
Roelants, Kim, Fry, Bryan G, Ye, Lumeng, Stijlemans, Benoit, Brys, Lea, Kok, Philippe, Clynen, Elke, Schoofs, Liliane, Cornelis, Pierre, Bossuyt, Franky
Published in PLoS genetics (01.08.2013)
Published in PLoS genetics (01.08.2013)
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Journal Article
A combinatorial approach to the structure elucidation of a pyoverdine siderophore produced by a Pseudomonas putida isolate and the use of pyoverdine as a taxonomic marker for typing P. putida subspecies
Ye, Lumeng, Ballet, Steven, Hildebrand, Falk, Laus, Georges, Guillemyn, Karel, Raes, Jeroen, Matthijs, Sandra, Martins, José, Cornelis, Pierre
Published in Biometals (01.08.2013)
Published in Biometals (01.08.2013)
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High-yield genome engineering in primary cells using a hybrid ssDNA repair template and small-molecule cocktails
Shy, Brian R., Vykunta, Vivasvan S., Ha, Alvin, Talbot, Alexis, Roth, Theodore L., Nguyen, David N., Pfeifer, Wolfgang G., Chen, Yan Yi, Blaeschke, Franziska, Shifrut, Eric, Vedova, Shane, Mamedov, Murad R., Chung, Jing-Yi Jing, Li, Hong, Yu, Ruby, Wu, David, Wolf, Jeffrey, Martin, Thomas G., Castro, Carlos E., Ye, Lumeng, Esensten, Jonathan H., Eyquem, Justin, Marson, Alexander
Published in Nature biotechnology (01.04.2023)
Published in Nature biotechnology (01.04.2023)
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Journal Article
Pore-forming pyocin S5 utilizes the FptA ferripyochelin receptor to kill Pseudomonas aeruginosa
Elfarash, Ameer, Dingemans, Jozef, Ye, Lumeng, Hassan, Ahmed Amir, Craggs, Michael, Reimmann, Cornelia, Thomas, Mark S, Cornelis, Pierre
Published in Microbiology (Society for General Microbiology) (01.02.2014)
Published in Microbiology (Society for General Microbiology) (01.02.2014)
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Journal Article
An efficient, tunable solution for pre-capture multiplexing in targeted sequencing via novel chemistry and semiconductor DNA synthesis technology
Song, Irene, Miller, Raymond, Wang, Jiashi, Wang, Jianpeng, Fan, Long, Ye, Lumeng, Li, Hong, Huang, Heidi
Published in Journal of biomolecular techniques (01.08.2020)
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Published in Journal of biomolecular techniques (01.08.2020)
Journal Article
The deletion of TonB-dependent receptor genes is part of the genome reduction process that occurs during adaptation of Pseudomonas aeruginosa to the cystic fibrosis lung
Dingemans, Jozef, Ye, Lumeng, Hildebrand, Falk, Tontodonati, Francesca, Craggs, Michael, Bilocq, Florence, De Vos, Daniel, Crabbé, Aurélie, Van Houdt, Rob, Malfroot, Anne, Cornelis, Pierre
Published in Pathogens and disease (01.06.2014)
Published in Pathogens and disease (01.06.2014)
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Journal Article
Analysis of the draft genome of Pseudomonas fluorescens ATCC17400 indicates a capacity to take up iron from a wide range of sources, including different exogenous pyoverdines
Ye, Lumeng, Matthijs, Sandra, Bodilis, Josselin, Hildebrand, Falk, Raes, Jeroen, Cornelis, Pierre
Published in Biometals (01.08.2014)
Published in Biometals (01.08.2014)
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Journal Article
Structure Revision of N-Mercapto-4-formylcarbostyril Produced by Pseudomonas fluorescens G308 to 2-(2-Hydroxyphenyl)thiazole-4-carbaldehyde [aeruginaldehyde]
Ye, Lumeng, Cornelis, Pierre, Guillemyn, Karel, Ballet, Steven, Christophersen, Carsten, Hammerich, Ole
Published in Natural product communications (01.06.2014)
Published in Natural product communications (01.06.2014)
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Journal Article
Antimicrobial properties of Pseudomonas strains producing the antibiotic mupirocin
Matthijs, Sandra, Vander Wauven, Corinne, Cornu, Bertrand, Ye, Lumeng, Cornelis, Pierre, Thomas, Christopher M., Ongena, Marc
Published in Research in microbiology (01.10.2014)
Published in Research in microbiology (01.10.2014)
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Pseudomonas aeruginosa LysR PA4203 Regulator NmoR Acts as a Repressor of the PA4202 nmoA Gene, Encoding a Nitronate Monooxygenase
Vercammen, Ken, Wei, Qing, Charlier, Daniel, Dötsch, Andreas, Haöüssler, Susanne, Schulz, Sebastian, Salvi, Francesca, Gadda, Giovanni, Spain, Jim, Rybtke, Morten Levin, Tolker-Nielsen, Tim, Dingemans, Jozef, Ye, Lumeng, Cornelis, Pierre
Published in Journal of bacteriology (01.03.2015)
Published in Journal of bacteriology (01.03.2015)
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Journal Article
Origin and Functional Diversification of an Amphibian Defense Peptide Arsenal: e1003662
Roelants, Kim, Fry, Bryan G, Ye, Lumeng, Stijlemans, Benoit, Brys, Lea, Kok, Philippe, Clynen, Elke, Schoofs, Liliane, Cornelis, Pierre, Bossuyt, Franky
Published in PLoS genetics (01.08.2013)
Published in PLoS genetics (01.08.2013)
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Journal Article
Genome Sequence of Mucoid Pseudomonas aeruginosa Strain FRD1
Wang, Di, Hildebrand, Falk, Ye, Lumeng, Wei, Qing, Ma, Luyan Z
Published in Genome announcements (Washington, DC) (23.04.2015)
Published in Genome announcements (Washington, DC) (23.04.2015)
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Journal Article
Draft Genome Sequence Analysis of a Pseudomonas putida W15Oct28 Strain with Antagonistic Activity to Gram-Positive and Pseudomonas sp. Pathogens: e110038
Ye, Lumeng, Hildebrand, Falk, Dingemans, Jozef, Ballet, Steven, Laus, George, Matthijs, Sandra, Berendsen, Roeland, Cornelis, Pierre
Published in PloS one (01.11.2014)
Published in PloS one (01.11.2014)
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