Emergent simplicity in microbial community assembly
Goldford, Joshua E, Lu, Nanxi, Bajić, Djordje, Estrela, Sylvie, Tikhonov, Mikhail, Sanchez-Gorostiaga, Alicia, Segrè, Daniel, Mehta, Pankaj, Sanchez, Alvaro
Published in Science (American Association for the Advancement of Science) (03.08.2018)
Published in Science (American Association for the Advancement of Science) (03.08.2018)
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Journal Article
The meta-gut: community coalescence of animal gut and environmental microbiomes
Dutton, Christopher L., Subalusky, Amanda L., Sanchez, Alvaro, Estrela, Sylvie, Lu, Nanxi, Hamilton, Stephen K., Njoroge, Laban, Rosi, Emma J., Post, David M.
Published in Scientific reports (30.11.2021)
Published in Scientific reports (30.11.2021)
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Journal Article
Functional attractors in microbial community assembly
Estrela, Sylvie, Vila, Jean C.C., Lu, Nanxi, Bajić, Djordje, Rebolleda-Gómez, Maria, Chang, Chang-Yu, Goldford, Joshua E., Sanchez-Gorostiaga, Alicia, Sánchez, Álvaro
Published in Cell systems (19.01.2022)
Published in Cell systems (19.01.2022)
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Journal Article
Flagella-Mediated Differences in Deposition Dynamics for Azotobacter vinelandii in Porous Media
Lu, Nanxi, Bevard, Tara, Massoudieh, Arash, Zhang, Changyong, Dohnalkova, Alice C, Zilles, Julie L, Nguyen, Thanh H
Published in Environmental science & technology (21.05.2013)
Published in Environmental science & technology (21.05.2013)
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Journal Article
Bayesian process-identification in bacteria transport in porous media
Massoudieh, Arash, Lu, Nanxi, Liang, Xiaomeng, Nguyen, Thanh H., Ginn, Timothy R.
Published in Journal of contaminant hydrology (01.10.2013)
Published in Journal of contaminant hydrology (01.10.2013)
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Journal Article
Top-down and bottom-up cohesiveness in microbial community coalescence
Diaz-Colunga, Juan, Lu, Nanxi, Sanchez-Gorostiaga, Alicia, Chang, Chang-Yu, Cai, Helen S, Goldford, Joshua E, Tikhonov, Mikhail, Sánchez, Álvaro
Published in Proceedings of the National Academy of Sciences - PNAS (08.02.2022)
Published in Proceedings of the National Academy of Sciences - PNAS (08.02.2022)
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Journal Article
Ureolytic Biomineralization Reduces Proteus mirabilis Biofilm Susceptibility to Ciprofloxacin
Li, Xiaobao, Lu, Nanxi, Brady, Hannah R, Packman, Aaron I
Published in Antimicrobial agents and chemotherapy (01.05.2016)
Published in Antimicrobial agents and chemotherapy (01.05.2016)
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Journal Article
Evaluation of bacterial run and tumble motility parameters through trajectory analysis
Liang, Xiaomeng, Lu, Nanxi, Chang, Lin-Ching, Nguyen, Thanh H., Massoudieh, Arash
Published in Journal of contaminant hydrology (01.04.2018)
Published in Journal of contaminant hydrology (01.04.2018)
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Journal Article
Microbial diversity in an intensively managed landscape is structured by landscape connectivity
Griffin, James S, Lu, Nanxi, Sangwan, Naseer, Li, Angang, Dsouza, Melissa, Stumpf, Andrew J, Sevilla, Tiffany, Culotti, Alessandro, Keefer, Laura L, Kelly, John J, Gilbert, Jack A, Wells, George F, Packman, Aaron I
Published in FEMS microbiology ecology (01.10.2017)
Published in FEMS microbiology ecology (01.10.2017)
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Journal Article
Quantitative Inference of Bacterial Motility Behavior
Xiaomeng Liang, Lin-Ching Chang, Massoudieh, Arash, Nanxi Lu, Nguyen, Thanh H.
Published in 2015 International Conference on Computational Science and Computational Intelligence (CSCI) (01.12.2015)
Published in 2015 International Conference on Computational Science and Computational Intelligence (CSCI) (01.12.2015)
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Conference Proceeding
Swimming Motility Reduces Azotobacter vinelandii Deposition to Silica Surfaces
Lu, Nanxi, Massoudieh, Arash, Liang, Xiaomeng, Hu, Dehong, Kamai, Tamir, Ginn, Timothy R., Zilles, Julie L., Nguyen, Thanh H.
Published in Journal of environmental quality (01.09.2015)
Published in Journal of environmental quality (01.09.2015)
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Journal Article
Swimming Motility Reduces Deposition to Silica Surfaces
Lu, Nanxi, Massoudieh, Arash, Liang, Xiaomeng, Hu, Dehong, Kamai, Tamir, Ginn, Timothy R, Zilles, Julie L, Nguyen, Thanh H
Published in Journal of environmental quality (01.09.2015)
Published in Journal of environmental quality (01.09.2015)
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Journal Article
Interactions between dissolved natural organic matter and adsorbed DNA and their effect on natural transformation of Azotobacter vinelandii
Lu, Nanxi, Mylon, Steven E., Kong, Rong, Bhargava, Rohit, Zilles, Julie L., Nguyen, Thanh H.
Published in The Science of the total environment (01.06.2012)
Published in The Science of the total environment (01.06.2012)
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Journal Article
Correction to Flagella-Mediated Differences in Deposition Dynamics for Azotobacter vinelandii in Porous Media
Lu, Nanxi, Bevard, Tara, Massoudieh, Arash, Zhang, Changyong, Dohnalkova, Alice C, Zilles, Julie L, Nguyen, Thanh H
Published in Environmental science & technology (16.07.2013)
Published in Environmental science & technology (16.07.2013)
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Journal Article
Interactions between dissolved natural organic matter and adsorbed DNA and their effect on natural transformation of Azorobacter vinelandii
NANXI LU, MYLON, Steven E, RONG KONG, BHARGAVA, Rohit, ZILLES, Julie L, NGUYEN, Thanh H
Published in The Science of the total environment (2012)
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Published in The Science of the total environment (2012)
Journal Article
Methods for Characterizing the Co-development of Biofilm and Habitat Heterogeneity
Li, Xiaobao, Song, Jisun L., Culotti, Alessandro, Zhang, Wei, Chopp, David L., Lu, Nanxi, Packman, Aaron I.
Published in Journal of visualized experiments (11.03.2015)
Published in Journal of visualized experiments (11.03.2015)
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Journal Article
Methods for characterizing the co-development of biofilm and habitat heterogeneity
Li, Xiaobao, Song, Jisun L, Culotti, Alessandro, Zhang, Wei, Chopp, David L, Lu, Nanxi, Packman, Aaron I
Published in Journal of visualized experiments (11.03.2015)
Published in Journal of visualized experiments (11.03.2015)
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Journal Article
A kinetic model of gene transfer via natural transformation of Azotobacter vinelandii
Lu, Nanxi, Massoudieh, Arash, Liang, Xiaomeng, Kamai, Tamir, Zilles, Julie L, Nguyen, Thanh H, Ginn, Timothy R
Published in Environmental science water research & technology (01.01.2015)
Published in Environmental science water research & technology (01.01.2015)
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Journal Article