Chromosome evolution at the origin of the ancestral vertebrate genome
Sacerdot, Christine, Louis, Alexandra, Bon, Céline, Berthelot, Camille, Roest Crollius, Hugues
Published in Genome Biology (17.10.2018)
Published in Genome Biology (17.10.2018)
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Journal Article
Classification of non-coding variants with high pathogenic impact
Moyon, Lambert, Berthelot, Camille, Louis, Alexandra, Nguyen, Nga Thi Thuy, Roest Crollius, Hugues
Published in PLoS genetics (29.04.2022)
Published in PLoS genetics (29.04.2022)
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Journal Article
Amphioxus functional genomics and the origins of vertebrate gene regulation
Marlétaz, Ferdinand, Firbas, Panos N., Maeso, Ignacio, Tena, Juan J., Bogdanovic, Ozren, Perry, Malcolm, Wyatt, Christopher D. R., de la Calle-Mustienes, Elisa, Bertrand, Stephanie, Burguera, Demian, Acemel, Rafael D., van Heeringen, Simon J., Naranjo, Silvia, Herrera-Ubeda, Carlos, Skvortsova, Ksenia, Jimenez-Gancedo, Sandra, Aldea, Daniel, Marquez, Yamile, Buono, Lorena, Kozmikova, Iryna, Permanyer, Jon, Louis, Alexandra, Albuixech-Crespo, Beatriz, Le Petillon, Yann, Leon, Anthony, Subirana, Lucie, Balwierz, Piotr J., Duckett, Paul Edward, Farahani, Ensieh, Aury, Jean-Marc, Mangenot, Sophie, Wincker, Patrick, Albalat, Ricard, Benito-Gutiérrez, Èlia, Cañestro, Cristian, Castro, Filipe, D’Aniello, Salvatore, Ferrier, David E. K., Huang, Shengfeng, Laudet, Vincent, Marais, Gabriel A. B., Pontarotti, Pierre, Schubert, Michael, Seitz, Hervé, Somorjai, Ildiko, Takahashi, Tokiharu, Mirabeau, Olivier, Xu, Anlong, Yu, Jr-Kai, Carninci, Piero, Martinez-Morales, Juan Ramon, Crollius, Hugues Roest, Kozmik, Zbynek, Weirauch, Matthew T., Garcia-Fernàndez, Jordi, Lister, Ryan, Lenhard, Boris, Holland, Peter W. H., Escriva, Hector, Gómez-Skarmeta, Jose Luis, Irimia, Manuel
Published in Nature (London) (01.12.2018)
Published in Nature (London) (01.12.2018)
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Journal Article
Genomicus: a database and a browser to study gene synteny in modern and ancestral genomes
Muffato, Matthieu, Louis, Alexandra, Poisnel, Charles-Edouard, Crollius, Hugues Roest
Published in Bioinformatics (15.04.2010)
Published in Bioinformatics (15.04.2010)
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Journal Article
ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets
Brozovic, Matija, Dantec, Christelle, Dardaillon, Justine, Dauga, Delphine, Faure, Emmanuel, Gineste, Mathieu, Louis, Alexandra, Naville, Magali, Nitta, Kazuhiro R, Piette, Jacques, Reeves, Wendy, Scornavacca, Céline, Simion, Paul, Vincentelli, Renaud, Bellec, Maelle, Aicha, Sameh Ben, Fagotto, Marie, Guéroult-Bellone, Marion, Haeussler, Maximilian, Jacox, Edwin, Lowe, Elijah K, Mendez, Mickael, Roberge, Alexis, Stolfi, Alberto, Yokomori, Rui, Brown, C Titus, Cambillau, Christian, Christiaen, Lionel, Delsuc, Frédéric, Douzery, Emmanuel, Dumollard, Rémi, Kusakabe, Takehiro, Nakai, Kenta, Nishida, Hiroki, Satou, Yutaka, Swalla, Billie, Veeman, Michael, Volff, Jean-Nicolas, Lemaire, Patrick
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Journal Article
ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates
Dardaillon, Justine, Dauga, Delphine, Simion, Paul, Faure, Emmanuel, Onuma, Takeshi A, DeBiasse, Melissa B, Louis, Alexandra, Nitta, Kazuhiro R, Naville, Magali, Besnardeau, Lydia, Reeves, Wendy, Wang, Kai, Fagotto, Marie, Guéroult-Bellone, Marion, Fujiwara, Shigeki, Dumollard, Rémi, Veeman, Michael, Volff, Jean-Nicolas, Roest Crollius, Hugues, Douzery, Emmanuel, Ryan, Joseph F, Davidson, Bradley, Nishida, Hiroki, Dantec, Christelle, Lemaire, Patrick
Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
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Journal Article
Plasticity of Animal Genome Architecture Unmasked by Rapid Evolution of a Pelagic Tunicate
Denoeud, France, Henriet, Simon, Mungpakdee, Sutada, Aury, Jean-Marc, Da Silva, Corinne, Brinkmann, Henner, Mikhaleva, Jana, Olsen, Lisbeth Charlotte, Jubin, Claire, Cañestro, Cristian, Bouquet, Jean-Marie, Danks, Gemma, Poulain, Julie, Campsteijn, Coen, Adamski, Marcin, Cross, Ismael, Yadetie, Fekadu, Muffato, Matthieu, Louis, Alexandra, Butcher, Stephen, Tsagkogeorga, Georgia, Konrad, Anke, Singh, Sarabdeep, Jensen, Marit Flo, Cong, Evelyne Huynh, Eikeseth-Otteraa, Helen, Noel, Benjamin, Anthouard, Véronique, Porcel, Betina M., Kachouri-Lafond, Rym, Nishino, Atsuo, Ugolini, Matteo, Chourrout, Pascal, Nishida, Hiroki, Aasland, Rein, Huzurbazar, Snehalata, Westhof, Eric, Delsuc, Frédéric, Lehrach, Hans, Reinhardt, Richard, Weissenbach, Jean, Roy, Scott W., Artiguenave, François, Postlethwait, John H., Manak, J. Robert, Thompson, Eric M., Jaillon, Olivier, Du Pasquier, Louis, Boudinot, Pierre, Liberles, David A., Volff, Jean-Nicolas, Philippe, Hervé, Lenhard, Boris, Crollius, Hugues Roest, Wincker, Patrick, Chourrout, Daniel
Published in Science (American Association for the Advancement of Science) (03.12.2010)
Published in Science (American Association for the Advancement of Science) (03.12.2010)
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Journal Article
Long-range evolutionary constraints reveal cis-regulatory interactions on the human X chromosome
Naville, Magali, Ishibashi, Minaka, Ferg, Marco, Bengani, Hemant, Rinkwitz, Silke, Krecsmarik, Monika, Hawkins, Thomas A., Wilson, Stephen W., Manning, Elizabeth, Chilamakuri, Chandra S. R., Wilson, David I., Louis, Alexandra, Lucy Raymond, F., Rastegar, Sepand, Strähle, Uwe, Lenhard, Boris, Bally-Cuif, Laure, van Heyningen, Veronica, FitzPatrick, David R., Becker, Thomas S., Roest Crollius, Hugues
Published in Nature communications (24.04.2015)
Published in Nature communications (24.04.2015)
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Journal Article
Genomicus: five genome browsers for comparative genomics in eukaryota
Louis, Alexandra, Muffato, Matthieu, Roest Crollius, Hugues
Published in Nucleic acids research (01.01.2013)
Published in Nucleic acids research (01.01.2013)
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Journal Article
Genomicus 2018: karyotype evolutionary trees and on-the-fly synteny computing
Nguyen, Nga Thi Thuy, Vincens, Pierre, Roest Crollius, Hugues, Louis, Alexandra
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Journal Article
The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates
Berthelot, Camille, Brunet, Frédéric, Chalopin, Domitille, Juanchich, Amélie, Bernard, Maria, Noël, Benjamin, Bento, Pascal, Da Silva, Corinne, Labadie, Karine, Alberti, Adriana, Aury, Jean-Marc, Louis, Alexandra, Dehais, Patrice, Bardou, Philippe, Montfort, Jérôme, Klopp, Christophe, Cabau, Cédric, Gaspin, Christine, Thorgaard, Gary H., Boussaha, Mekki, Quillet, Edwige, Guyomard, René, Galiana, Delphine, Bobe, Julien, Volff, Jean-Nicolas, Genêt, Carine, Wincker, Patrick, Jaillon, Olivier, Crollius, Hugues Roest, Guiguen, Yann
Published in Nature communications (22.04.2014)
Published in Nature communications (22.04.2014)
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Journal Article
Understanding Brassicaceae evolution through ancestral genome reconstruction
Murat, Florent, Louis, Alexandra, Maumus, Florian, Armero, Alix, Cooke, Richard, Quesneville, Hadi, Roest Crollius, Hugues, Salse, Jerome
Published in Genome Biology (10.12.2015)
Published in Genome Biology (10.12.2015)
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