The carbohydrate-active enzyme database: functions and literature
Drula, Elodie, Garron, Marie-Line, Dogan, Suzan, Lombard, Vincent, Henrissat, Bernard, Terrapon, Nicolas
Published in Nucleic acids research (07.01.2022)
Published in Nucleic acids research (07.01.2022)
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Journal Article
Bacteroidetes use thousands of enzyme combinations to break down glycans
Lapébie, Pascal, Lombard, Vincent, Drula, Elodie, Terrapon, Nicolas, Henrissat, Bernard
Published in Nature communications (03.05.2019)
Published in Nature communications (03.05.2019)
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Journal Article
PULDB: the expanded database of Polysaccharide Utilization Loci
Terrapon, Nicolas, Lombard, Vincent, Drula, Élodie, Lapébie, Pascal, Al-Masaudi, Saad, Gilbert, Harry J, Henrissat, Bernard
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Journal Article
A subfamily roadmap of the evolutionarily diverse glycoside hydrolase family 16 (GH16)
Viborg, Alexander Holm, Terrapon, Nicolas, Lombard, Vincent, Michel, Gurvan, Czjzek, Mirjam, Henrissat, Bernard, Brumer, Harry
Published in The Journal of biological chemistry (01.11.2019)
Published in The Journal of biological chemistry (01.11.2019)
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Journal Article
Automatic prediction of polysaccharide utilization loci in Bacteroidetes species
Terrapon, Nicolas, Lombard, Vincent, Gilbert, Harry J, Henrissat, Bernard
Published in Bioinformatics (01.03.2015)
Published in Bioinformatics (01.03.2015)
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Journal Article
Discovery of novel carbohydrate-active enzymes through the rational exploration of the protein sequences space
Helbert, William, Poulet, Laurent, Drouillard, Sophie, Mathieu, Sophie, Loiodice, Mélanie, Couturier, Marie, Lombard, Vincent, Terrapon, Nicolas, Turchetto, Jeremy, Vincentelli, Renaud, Henrissat, Bernard
Published in Proceedings of the National Academy of Sciences - PNAS (26.03.2019)
Published in Proceedings of the National Academy of Sciences - PNAS (26.03.2019)
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Journal Article
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits
Miyauchi, Shingo, Kiss, Enikő, Kuo, Alan, Drula, Elodie, Kohler, Annegret, Sánchez-García, Marisol, Morin, Emmanuelle, Andreopoulos, Bill, Barry, Kerrie W., Bonito, Gregory, Buée, Marc, Carver, Akiko, Chen, Cindy, Cichocki, Nicolas, Clum, Alicia, Culley, David, Crous, Pedro W., Fauchery, Laure, Girlanda, Mariangela, Hayes, Richard D., Kéri, Zsófia, LaButti, Kurt, Lipzen, Anna, Lombard, Vincent, Magnuson, Jon, Maillard, François, Murat, Claude, Nolan, Matt, Ohm, Robin A., Pangilinan, Jasmyn, Pereira, Maíra de Freitas, Perotto, Silvia, Peter, Martina, Pfister, Stephanie, Riley, Robert, Sitrit, Yaron, Stielow, J. Benjamin, Szöllősi, Gergely, Žifčáková, Lucia, Štursová, Martina, Spatafora, Joseph W., Tedersoo, Leho, Vaario, Lu-Min, Yamada, Akiyoshi, Yan, Mi, Wang, Pengfei, Xu, Jianping, Bruns, Tom, Baldrian, Petr, Vilgalys, Rytas, Dunand, Christophe, Henrissat, Bernard, Grigoriev, Igor V., Hibbett, David, Nagy, László G., Martin, Francis M.
Published in Nature communications (12.10.2020)
Published in Nature communications (12.10.2020)
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Journal Article
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
Seshadri, Rekha, Leahy, Sinead C, Attwood, Graeme T, Teh, Koon Hoong, Lambie, Suzanne C, Cookson, Adrian L, Eloe-Fadrosh, Emiley A, Pavlopoulos, Georgios A, Hadjithomas, Michalis, Varghese, Neha J, Paez-Espino, David, Perry, Rechelle, Henderson, Gemma, Creevey, Christopher J, Terrapon, Nicolas, Lapebie, Pascal, Drula, Elodie, Lombard, Vincent, Rubin, Edward, Kyrpides, Nikos C, Henrissat, Bernard, Woyke, Tanja, Ivanova, Natalia N, Kelly, William J
Published in Nature biotechnology (01.04.2018)
Published in Nature biotechnology (01.04.2018)
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Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris
Tsang, Adrian, Berka, Randy M, Grigoriev, Igor V, Otillar, Robert, Salamov, Asaf, Grimwood, Jane, Reid, Ian, Ishmael, Nadeeza, John, Tricia, Darmond, Corinne, Moisan, Marie-Claude, Henrissat, Bernard, Coutinho, Pedro M, Lombard, Vincent, Natvig, Donald O, Lindquist, Erika, Schmutz, Jeremy, Lucas, Susan, Harris, Paul, Powlowski, Justin, Bellemare, Annie, Taylor, David, Butler, Gregory, de Vries, Ronald P, Allijn, Iris E, van den Brink, Joost, Ushinsky, Sophia, Storms, Reginald, Powell, Amy J, Paulsen, Ian T, Elbourne, Liam D H, Baker, Scott E, Magnuson, Jon, LaBoissiere, Sylvie, Clutterbuck, A John, Martinez, Diego, Wogulis, Mark, de Leon, Alfredo Lopez, Rey, Michael W
Published in Nature biotechnology (01.10.2011)
Published in Nature biotechnology (01.10.2011)
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Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi
Riley, Robert, Salamov, Asaf A., Brown, Daren W., Nagy, Laszlo G., Floudas, Dimitrios, Held, Benjamin W., Levasseur, Anthony, Lombard, Vincent, Morin, Emmanuelle, Otillar, Robert, Lindquist, Erika A., Sun, Hui, LaButti, Kurt M., Schmutz, Jeremy, Jabbour, Dina, Luoi, Hong, Baker, Scott E., Pisabarro, Antonio G., Walton, Jonathan D., Blanchette, Robert A., Henrissat, Bernard, Martin, Francis, Cullen, Dan, Hibbett, David S., Grigoriev, Igor V.
Published in Proceedings of the National Academy of Sciences - PNAS (08.07.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (08.07.2014)
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Journal Article
Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice
Ridaura, Vanessa K., Faith, Jeremiah J., Rey, Federico E., Cheng, Jiye, Duncan, Alexis E., Kau, Andrew L., Griffin, Nicholas W., Lombard, Vincent, Henrissat, Bernard, Bain, James R., Muehlbauer, Michael J., Ilkayeva, Olga, Semenkovich, Clay F., Funai, Katsuhiko, Hayashi, David K., Lyle, Barbara J., Martini, Margaret C., Ursell, Luke K., Clemente, Jose C., Van Treuren, William, Walters, William A., Knight, Rob, Newgard, Christopher B., Heath, Andrew C., Gordon, Jeffrey I.
Published in Science (American Association for the Advancement of Science) (06.09.2013)
Published in Science (American Association for the Advancement of Science) (06.09.2013)
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Journal Article
A hierarchical classification of polysaccharide lyases for glycogenomics
Lombard, Vincent, Bernard, Thomas, Rancurel, Corinne, Brumer, Harry, Coutinho, Pedro M, Henrissat, Bernard
Published in Biochemical journal (15.12.2010)
Published in Biochemical journal (15.12.2010)
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Journal Article
Insight into trade‐off between wood decay and parasitism from the genome of a fungal forest pathogen
Olson, Åke, Aerts, Andrea, Asiegbu, Fred, Belbahri, Lassaad, Bouzid, Ourdia, Broberg, Anders, Canbäck, Björn, Coutinho, Pedro M, Cullen, Dan, Dalman, Kerstin, Deflorio, Giuliana, van Diepen, Linda T.A, Dunand, Christophe, Duplessis, Sébastien, Durling, Mikael, Gonthier, Paolo, Grimwood, Jane, Fossdal, Carl Gunnar, Hansson, David, Henrissat, Bernard, Hietala, Ari, Himmelstrand, Kajsa, Hoffmeister, Dirk, Högberg, Nils, James, Timothy Y, Karlsson, Magnus, Kohler, Annegret, Kües, Ursula, Lee, Yong‐Hwan, Lin, Yao‐Cheng, Lind, Mårten, Lindquist, Erika, Lombard, Vincent, Lucas, Susan, Lundén, Karl, Morin, Emmanuelle, Murat, Claude, Park, Jongsun, Raffaello, Tommaso, Rouzé, Pierre, Salamov, Asaf, Schmutz, Jeremy, Solheim, Halvor, Ståhlberg, Jerry, Vélëz, Heriberto, de Vries, Ronald P, Wiebenga, Ad, Woodward, Steve, Yakovlev, Igor, Garbelotto, Matteo, Martin, Francis, Grigoriev, Igor V, Stenlid, Jan
Published in The New phytologist (01.06.2012)
Published in The New phytologist (01.06.2012)
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Bacteria from Diverse Habitats Colonize and Compete in the Mouse Gut
Seedorf, Henning, Griffin, Nicholas W., Ridaura, Vanessa K., Reyes, Alejandro, Cheng, Jiye, Rey, Federico E., Smith, Michelle I., Simon, Gabriel M., Scheffrahn, Rudolf H., Woebken, Dagmar, Spormann, Alfred M., Van Treuren, William, Ursell, Luke K., Pirrung, Megan, Robbins-Pianka, Adam, Cantarel, Brandi L., Lombard, Vincent, Henrissat, Bernard, Knight, Rob, Gordon, Jeffrey I.
Published in Cell (09.10.2014)
Published in Cell (09.10.2014)
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Feed in summer, rest in winter: microbial carbon utilization in forest topsoil
Žifčáková, Lucia, Větrovský, Tomáš, Lombard, Vincent, Henrissat, Bernard, Howe, Adina, Baldrian, Petr
Published in Microbiome (18.09.2017)
Published in Microbiome (18.09.2017)
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How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans
Cartmell, Alan, Lowe, Elisabeth C., Baslé, Arnaud, Firbank, Susan J., Ndeh, Didier A., Murray, Heath, Terrapon, Nicolas, Lombard, Vincent, Henrissat, Bernard, Turnbull, Jeremy E., Czjzek, Mirjam, Gilbert, Harry J., Bolam, David N.
Published in Proceedings of the National Academy of Sciences - PNAS (03.07.2017)
Published in Proceedings of the National Academy of Sciences - PNAS (03.07.2017)
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Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut
Michalak, Leszek, Gaby, John Christian, Lagos, Leidy, La Rosa, Sabina Leanti, Hvidsten, Torgeir R., Tétard-Jones, Catherine, Willats, William G. T., Terrapon, Nicolas, Lombard, Vincent, Henrissat, Bernard, Dröge, Johannes, Arntzen, Magnus Øverlie, Hagen, Live Heldal, Øverland, Margareth, Pope, Phillip B., Westereng, Bjørge
Published in Nature communications (13.11.2020)
Published in Nature communications (13.11.2020)
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Discovery of fungal oligosaccharide-oxidising flavo-enzymes with previously unknown substrates, redox-activity profiles and interplay with LPMOs
Haddad Momeni, Majid, Fredslund, Folmer, Bissaro, Bastien, Raji, Olanrewaju, Vuong, Thu V., Meier, Sebastian, Nielsen, Tine Sofie, Lombard, Vincent, Guigliarelli, Bruno, Biaso, Frédéric, Haon, Mireille, Grisel, Sacha, Henrissat, Bernard, Welner, Ditte Hededam, Master, Emma R., Berrin, Jean-Guy, Abou Hachem, Maher
Published in Nature communications (09.04.2021)
Published in Nature communications (09.04.2021)
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