Deep Learning Global Glomerulosclerosis in Transplant Kidney Frozen Sections
Marsh, Jon N., Matlock, Matthew K., Kudose, Satoru, Liu, Ta-Chiang, Stappenbeck, Thaddeus S., Gaut, Joseph P., Swamidass, S. Joshua
Published in IEEE transactions on medical imaging (01.12.2018)
Published in IEEE transactions on medical imaging (01.12.2018)
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IL-6 stimulates intestinal epithelial proliferation and repair after injury
Kuhn, Kristine A, Manieri, Nicholas A, Liu, Ta-Chiang, Stappenbeck, Thaddeus S
Published in PloS one (05.12.2014)
Published in PloS one (05.12.2014)
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Long-Term Culture Captures Injury-Repair Cycles of Colonic Stem Cells
Wang, Yi, Chiang, I-Ling, Ohara, Takahiro E., Fujii, Satoru, Cheng, Jiye, Muegge, Brian D., Ver Heul, Aaron, Han, Nathan D., Lu, Qiuhe, Xiong, Shanshan, Chen, Feidi, Lai, Chin-Wen, Janova, Hana, Wu, Renee, Whitehurst, Charles E., VanDussen, Kelli L., Liu, Ta-Chiang, Gordon, Jeffrey I., Sibley, L. David, Stappenbeck, Thaddeus S.
Published in Cell (14.11.2019)
Published in Cell (14.11.2019)
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Alternative Lengthening of Telomeres and Loss of DAXX/ATRX Expression Predicts Metastatic Disease and Poor Survival in Patients with Pancreatic Neuroendocrine Tumors
Singhi, Aatur D, Liu, Ta-Chiang, Roncaioli, Justin L, Cao, Dengfeng, Zeh, Herbert J, Zureikat, Amer H, Tsung, Allan, Marsh, J Wallis, Lee, Kenneth K, Hogg, Melissa E, Bahary, Nathan, Brand, Randall E, McGrath, Kevin M, Slivka, Adam, Cressman, Kristi L, Fuhrer, Kimberly, O'Sullivan, Roderick J
Published in Clinical cancer research (15.01.2017)
Published in Clinical cancer research (15.01.2017)
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Genetic variation in environmental enteropathy and stunting in Zambian children: A pilot genome wide association study using the H3Africa chip
Mweetwa, Monica N, Haritunians, Talin, Dube, Shishir, Chandwe, Kanta, Amadi, Beatrice, Zyambo, Kanekwa, Liu, Ta-Chiang, McGovern, Dermot, Kelly, Paul
Published in PloS one (27.09.2023)
Published in PloS one (27.09.2023)
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Virus-Plus-Susceptibility Gene Interaction Determines Crohn's Disease Gene Atg16L1 Phenotypes in Intestine
Cadwell, Ken, Patel, Khushbu K., Maloney, Nicole S., Liu, Ta-Chiang, Ng, Aylwin C.Y., Storer, Chad E., Head, Richard D., Xavier, Ramnik, Stappenbeck, Thaddeus S., Virgin, Herbert W.
Published in Cell (25.06.2010)
Published in Cell (25.06.2010)
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A type 2 immune circuit in the stomach controls mammalian adaptation to dietary chitin
Kim, Do-Hyun, Wang, Yilin, Jung, Haerin, Field, Rachael L, Zhang, Xinya, Liu, Ta-Chiang, Ma, Changqing, Fraser, James S, Brestoff, Jonathan R, Van Dyken, Steven J
Published in Science (American Association for the Advancement of Science) (08.09.2023)
Published in Science (American Association for the Advancement of Science) (08.09.2023)
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Reverse translation approach generates a signature of penetrating fibrosis in Crohn’s disease that is associated with anti-TNF response
Xiong, Shanshan, Whitehurst, Charles E, Li, Li, Heo, Gyu Seong, Lai, Chin-Wen, Jain, Umang, Muegge, Brian D, Espenschied, Scott T, Musich, Ryan J, Chen, Minhu, Liu, Yongjian, Liu, Ta-Chiang, Stappenbeck, Thaddeus S
Published in Gut (01.07.2022)
Published in Gut (01.07.2022)
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Atg16L1 T300A variant decreases selective autophagy resulting in altered cytokine signaling and decreased antibacterial defense
Lassen, Kara G., Kuballa, Petric, Conway, Kara L., Patel, Khushbu K., Becker, Christine E., Peloquin, Joanna M., Villablanca, Eduardo J., Norman, Jason M., Liu, Ta-Chiang, Heath, Robert J., Becker, Morgan L., Fagbami, Lola, Horn, Heiko, Mercer, Johnathan, Yilmaz, Omer H., Jaffe, Jacob D., Shamji, Alykhan F., Bhan, Atul K., Carr, Steven A., Daly, Mark J., Virgin, Herbert W., Schreiber, Stuart L., Stappenbeck, Thaddeus S., Xavier, Ramnik J.
Published in Proceedings of the National Academy of Sciences - PNAS (27.05.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (27.05.2014)
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Infection and inflammation stimulate expansion of a CD74+ Paneth cell subset to regulate disease progression
Balasubramanian, Iyshwarya, Bandyopadhyay, Sheila, Flores, Juan, Bianchi‐Smak, Jared, Lin, Xiang, Liu, Haoran, Sun, Shengxiang, Golovchenko, Natasha B, Liu, Yue, Wang, Dahui, Patel, Radha, Joseph, Ivor, Suntornsaratoon, Panan, Vargas, Justin, Green, Peter HR, Bhagat, Govind, Lagana, Stephen M, Ying, Wang, Zhang, Yi, Wang, Zhihan, Li, Wei Vivian, Singh, Sukhwinder, Zhou, Zhongren, Kollias, George, Farr, Laura A, Moonah, Shannon N, Yu, Shiyan, Wei, Zhi, Bonder, Edward M, Zhang, Lanjing, Kiela, Pawel R, Edelblum, Karen L, Ferraris, Ronaldo, Liu, Ta‐Chiang, Gao, Nan
Published in The EMBO journal (02.11.2023)
Published in The EMBO journal (02.11.2023)
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A novel histological index for evaluation of environmental enteric dysfunction identifies geographic-specific features of enteropathy among children with suboptimal growth
Liu, Ta-Chiang, VanBuskirk, Kelley, Ali, Syed A, Kelly, M Paul, Holtz, Lori R, Yilmaz, Omer H, Sadiq, Kamran, Iqbal, Najeeha, Amadi, Beatrice, Syed, Sana, Ahmed, Tahmeed, Moore, Sean, Ndao, I Malick, Isaacs, Michael H, Pfeifer, John D, Atlas, Hannah, Tarr, Phillip I, Denno, Donna M, Moskaluk, Christopher A
Published in PLoS neglected tropical diseases (01.01.2020)
Published in PLoS neglected tropical diseases (01.01.2020)
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PAI-1 augments mucosal damage in colitis
Kaiko, Gerard E, Chen, Feidi, Lai, Chin-Wen, Chiang, I-Ling, Perrigoue, Jacqueline, Stojmirović, Aleksandar, Li, Katherine, Muegge, Brian D, Jain, Umang, VanDussen, Kelli L, Goggins, Bridie J, Keely, Simon, Weaver, Jessica, Foster, Paul S, Lawrence, Daniel A, Liu, Ta-Chiang, Stappenbeck, Thaddeus S
Published in Science translational medicine (06.03.2019)
Published in Science translational medicine (06.03.2019)
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Viral complementation of immunodeficiency confers protection against enteric pathogens via interferon-λ
Ingle, Harshad, Lee, Sanghyun, Ai, Teresa, Orvedahl, Anthony, Rodgers, Rachel, Zhao, Guoyan, Sullender, Meagan, Peterson, Stefan T, Locke, Marissa, Liu, Ta-Chiang, Yokoyama, Christine C, Sharp, Bridgett, Schultz-Cherry, Stacey, Miner, Jonathan J, Baldridge, Megan T
Published in Nature microbiology (01.07.2019)
Published in Nature microbiology (01.07.2019)
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Diet-omics in the Study of Urban and Rural Crohn disease Evolution (SOURCE) cohort
Braun, Tzipi, Feng, Rui, Amir, Amnon, Levhar, Nina, Shacham, Hila, Mao, Ren, Hadar, Rotem, Toren, Itamar, Algavi, Yadid, Abu-Saad, Kathleen, Zhuo, Shuoyu, Efroni, Gilat, Malik, Alona, Picard, Orit, Yavzori, Miri, Agranovich, Bella, Liu, Ta-Chiang, Stappenbeck, Thaddeus S, Denson, Lee, Kalter-Leibovici, Ofra, Gottlieb, Eyal, Borenstein, Elhanan, Elinav, Eran, Chen, Minhu, Ben-Horin, Shomron, Haberman, Yael
Published in Nature communications (04.05.2024)
Published in Nature communications (04.05.2024)
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Use of a targeted oncolytic poxvirus, JX-594, in patients with refractory primary or metastatic liver cancer: a phase I trial
Park, Byeong-Ho, Prof, Hwang, Taeho, MD, Liu, Ta-Chiang, MD, Sze, Daniel Y, MD, Kim, Jae-Seok, MD, Kwon, Hyuk-Chan, MD, Oh, Sung Yong, MD, Han, Sang-Young, Yoon, Jin-Han, MD, Hong, Sook-Hee, MD, Moon, Anne, PhD, Speth, Kelly, BSc, Park, Chohee, BSc, Ahn, Young-Joo, BSc, Daneshmand, Manijeh, MD, Rhee, Byung Geon, PhD, Pinedo, Herbert M, Prof, Bell, John C, Prof, Kirn, David H, Prof
Published in The lancet oncology (01.06.2008)
Published in The lancet oncology (01.06.2008)
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Ki-67 predicts disease recurrence and poor prognosis in pancreatic neuroendocrine neoplasms
Hamilton, Nicholas A., MD, Liu, Ta-Chiang, MD, PhD, Cavatiao, Antonino, BS, Mawad, Kareem, MD, Chen, Ling, PhD, Strasberg, Steven S., MD, Linehan, David C., MD, Cao, Dengfeng, MD, PhD, Hawkins, William G., MD
Published in Surgery (01.07.2012)
Published in Surgery (01.07.2012)
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Deep learning quantification of percent steatosis in donor liver biopsy frozen sections
Sun, Lulu, Marsh, Jon N., Matlock, Matthew K., Chen, Ling, Gaut, Joseph P., Brunt, Elizabeth M., Swamidass, S. Joshua, Liu, Ta-Chiang
Published in EBioMedicine (01.10.2020)
Published in EBioMedicine (01.10.2020)
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