Mechanisms of Plastic Deformation in Collagen Networks Induced by Cellular Forces
Ban, Ehsan, Franklin, J. Matthew, Nam, Sungmin, Smith, Lucas R., Wang, Hailong, Wells, Rebecca G., Chaudhuri, Ovijit, Liphardt, Jan T., Shenoy, Vivek B.
Published in Biophysical journal (23.01.2018)
Published in Biophysical journal (23.01.2018)
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NuSeT: A deep learning tool for reliably separating and analyzing crowded cells
Yang, Linfeng, Ghosh, Rajarshi P, Franklin, J Matthew, Chen, Simon, You, Chenyu, Narayan, Raja R, Melcher, Marc L, Liphardt, Jan T
Published in PLoS computational biology (01.09.2020)
Published in PLoS computational biology (01.09.2020)
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Journal Article
Concerted localization-resets precede YAP-dependent transcription
Franklin, J. Matthew, Ghosh, Rajarshi P., Shi, Quanming, Reddick, Michael P., Liphardt, Jan T.
Published in Nature communications (11.09.2020)
Published in Nature communications (11.09.2020)
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Journal Article
Single-molecule superresolution imaging allows quantitative analysis of RAF multimer formation and signaling
Nan, Xiaolin, Collisson, Eric A., Lewis, Sophia, Huang, Jing, Tamgüney, Tanja M., Liphardt, Jan T., McCormick, Frank, Gray, Joe W., Chu, Steven
Published in Proceedings of the National Academy of Sciences - PNAS (12.11.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (12.11.2013)
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Journal Article
Rapid disorganization of mechanically interacting systems of mammary acini
Shi, Quanming, Ghosh, Rajarshi P., Engelke, Hanna, Rycroft, Chris H., Cassereau, Luke, Sethian, James A., Weaver, Valerie M., Liphardt, Jan T.
Published in Proceedings of the National Academy of Sciences - PNAS (14.01.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (14.01.2014)
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Journal Article
Stiff stroma increases breast cancer risk by inducing the oncogene ZNF217
Northey, Jason J, Barrett, Alexander S, Acerbi, Irene, Hayward, Mary-Kate, Talamantes, Stephanie, Dean, Ivory S, Mouw, Janna K, Ponik, Suzanne M, Lakins, Jonathon N, Huang, Po-Jui, Wu, Junmin, Shi, Quanming, Samson, Susan, Keely, Patricia J, Mukhtar, Rita A, Liphardt, Jan T, Shepherd, John A, Hwang, E Shelley, Chen, Yunn-Yi, Hansen, Kirk C, Littlepage, Laurie E, Weaver, Valerie M
Published in The Journal of clinical investigation (01.11.2020)
Published in The Journal of clinical investigation (01.11.2020)
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Journal Article
Selectivity mechanism of the nuclear pore complex characterized by single cargo tracking
Weis, Karsten, Lowe, Alan R, Siegel, Jake J, Kalab, Petr, Siu, Merek, Liphardt, Jan T
Published in Nature (London) (30.09.2010)
Published in Nature (London) (30.09.2010)
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Journal Article
A fluorogenic array for temporally unlimited single-molecule tracking
Ghosh, Rajarshi P., Franklin, J. Matthew, Draper, Will E., Shi, Quanming, Beltran, Bruno, Spakowitz, Andrew J., Liphardt, Jan T.
Published in Nature chemical biology (01.04.2019)
Published in Nature chemical biology (01.04.2019)
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Journal Article
Satb1 integrates DNA binding site geometry and torsional stress to differentially target nucleosome-dense regions
Ghosh, Rajarshi P., Shi, Quanming, Yang, Linfeng, Reddick, Michael P., Nikitina, Tatiana, Zhurkin, Victor B., Fordyce, Polly, Stasevich, Timothy J., Chang, Howard Y., Greenleaf, William J., Liphardt, Jan T.
Published in Nature communications (19.07.2019)
Published in Nature communications (19.07.2019)
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Journal Article
Importin-β modulates the permeability of the nuclear pore complex in a Ran-dependent manner
Lowe, Alan R, Tang, Jeffrey H, Yassif, Jaime, Graf, Michael, Huang, William Y C, Groves, Jay T, Weis, Karsten, Liphardt, Jan T
Published in eLife (06.03.2015)
Published in eLife (06.03.2015)
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Journal Article
Optical control of fast and processive engineered myosins in vitro and in living cells
Ruijgrok, Paul V., Ghosh, Rajarshi P., Zemsky, Sasha, Nakamura, Muneaki, Gong, Rui, Ning, Lin, Chen, Robert, Vachharajani, Vipul T., Chu, Alexander E., Anand, Namrata, Eguchi, Raphael R., Huang, Po-Ssu, Lin, Michael Z., Alushin, Gregory M., Liphardt, Jan T., Bryant, Zev
Published in Nature chemical biology (01.05.2021)
Published in Nature chemical biology (01.05.2021)
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Journal Article
Scaffold nucleoporins Nup188 and Nup192 share structural and functional properties with nuclear transport receptors
Andersen, Kasper R, Onischenko, Evgeny, Tang, Jeffrey H, Kumar, Pravin, Chen, James Z, Ulrich, Alexander, Liphardt, Jan T, Weis, Karsten, Schwartz, Thomas U
Published in eLife (11.06.2013)
Published in eLife (11.06.2013)
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Journal Article
ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing
Chen, Xingqi, Shen, Ying, Draper, Will, Buenrostro, Jason D, Litzenburger, Ulrike, Cho, Seung Woo, Satpathy, Ansuman T, Carter, Ava C, Ghosh, Rajarshi P, East-Seletsky, Alexandra, Doudna, Jennifer A, Greenleaf, William J, Liphardt, Jan T, Chang, Howard Y
Published in Nature methods (01.12.2016)
Published in Nature methods (01.12.2016)
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Journal Article
Optical Control of Fast and Processive Engineered Myosins In Vitro and in Living Cells
Ruijgrok, Paul V., Ghosh, Rajarshi P., Nakamura, Muneaki, Zemsky, Sasha, Chen, Robert, Vachharajani, Vipul, Liphardt, Jan T., Bryant, Zev
Published in Biophysical journal (15.02.2019)
Published in Biophysical journal (15.02.2019)
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Journal Article
A physical sciences network characterization of non-tumorigenic and metastatic cells
Agus, David B, Alexander, Jenolyn F, Arap, Wadih, Ashili, Shashanka, Aslan, Joseph E, Austin, Robert H, Backman, Vadim, Bethel, Kelly J, Bonneau, Richard, Chen, Wei-Chiang, Chen-Tanyolac, Chira, Choi, Nathan C, Curley, Steven A, Dallas, Matthew, Damania, Dhwanil, Davies, Paul C W, Decuzzi, Paolo, Dickinson, Laura, Estevez-Salmeron, Luis, Estrella, Veronica, Ferrari, Mauro, Fischbach, Claudia, Foo, Jasmine, Fraley, Stephanie I, Frantz, Christian, Fuhrmann, Alexander, Gascard, Philippe, Gatenby, Robert A, Geng, Yue, Gerecht, Sharon, Gillies, Robert J, Godin, Biana, Grady, William M, Greenfield, Alex, Hemphill, Courtney, Hempstead, Barbara L, Hielscher, Abigail, Hillis, W Daniel, Holland, Eric C, Ibrahim-Hashim, Arig, Jacks, Tyler, Johnson, Roger H, Joo, Ahyoung, Katz, Jonathan E, Kelbauskas, Laimonas, Kesselman, Carl, King, Michael R, Konstantopoulos, Konstantinos, Kraning-Rush, Casey M, Kuhn, Peter, Kung, Kevin, Kwee, Brian, Lakins, Johnathon N, Lambert, Guillaume, Liao, David, Licht, Jonathan D, Liphardt, Jan T, Liu, Liyu, Lloyd, Mark C, Lyubimova, Anna, Mallick, Parag, Marko, John, McCarty, Owen J T, Meldrum, Deirdre R, Michor, Franziska, Mumenthaler, Shannon M, Nandakumar, Vivek, O'Halloran, Thomas V, Oh, Steve, Pasqualini, Renata, Paszek, Matthew J, Philips, Kevin G, Poultney, Christopher S, Rana, Kuldeepsinh, Reinhart-King, Cynthia A, Ros, Robert, Semenza, Gregg L, Senechal, Patti, Shuler, Michael L, Srinivasan, Srimeenakshi, Staunton, Jack R, Stypula, Yolanda, Subramanian, Hariharan, Tlsty, Thea D, Tormoen, Garth W, Tseng, Yiider, van Oudenaarden, Alexander, Verbridge, Scott S, Wan, Jenny C, Weaver, Valerie M, Widom, Jonathan, Will, Christine, Wirtz, Denis, Wojtkowiak, Jonathan, Wu, Pei-Hsun
Published in Scientific reports (26.04.2013)
Published in Scientific reports (26.04.2013)
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Journal Article
Importin-Beta and Ran Regulate the Passive Permeability Barrier in the Nuclear Pore Complex
Tang, Jeffrey H., Lowe, Alan R., Yassif, Jaime M., Weis, Karsten, Liphardt, Jan T.
Published in Biophysical journal (29.01.2013)
Published in Biophysical journal (29.01.2013)
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Journal Article
A Ran-Dependent Importin-Beta/Nup153 Barrier in the Nuclear Pore Complex
Tang, Jeffrey H., Lowe, Alan R., Yassif, Jaime, Graf, Michael, Huang, William Y.C., Groves, Jay T., Weis, Karsten, Liphardt, Jan T.
Published in Biophysical journal (28.01.2014)
Published in Biophysical journal (28.01.2014)
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