Analysis of the tyrosine kinome in melanoma reveals recurrent mutations in ERBB4
Lin, Jimmy C, Wunderlich, John R, Prickett, Todd D, Yates, Kristin E, Cruz, Pedro, Agrawal, Neena S, Cronin, Julia C, Samuels, Yardena, Wei, Xiaomu, Rosenberg, Steven A
Published in Nature genetics (01.10.2009)
Published in Nature genetics (01.10.2009)
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Recurrent inactivating RASA2 mutations in melanoma
Arafeh, Rand, Qutob, Nouar, Emmanuel, Rafi, Keren-Paz, Alona, Madore, Jason, Elkahloun, Abdel, Wilmott, James S, Gartner, Jared J, Di Pizio, Antonella, Winograd-Katz, Sabina, Sindiri, Sivasish, Rotkopf, Ron, Dutton-Regester, Ken, Johansson, Peter, Pritchard, Antonia L, Waddell, Nicola, Hill, Victoria K, Lin, Jimmy C, Hevroni, Yael, Rosenberg, Steven A, Khan, Javed, Ben-Dor, Shifra, Niv, Masha Y, Ulitsky, Igor, Mann, Graham J, Scolyer, Richard A, Hayward, Nicholas K, Samuels, Yardena
Published in Nature genetics (01.12.2015)
Published in Nature genetics (01.12.2015)
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Integrated analysis of homozygous deletions, focal amplifications, and sequence alterations in breast and colorectal cancers
Leary, Rebecca J, Lin, Jimmy C, Cummins, Jordan, Boca, Simina, Wood, Laura D, Parsons, D. Williams, Jones, Siân, Sjöblom, Tobias, Park, Ben-Ho, Parsons, Ramon, Willis, Joseph, Dawson, Dawn, Willson, James K.V, Nikolskaya, Tatiana, Nikolsky, Yuri, Kopelovich, Levy, Papadopoulos, Nick, Pennacchio, Len A, Wang, Tian-Li, Markowitz, Sanford D, Parmigiani, Giovanni, Kinzler, Kenneth W, Vogelstein, Bert, Velculescu, Victor E
Published in Proceedings of the National Academy of Sciences - PNAS (21.10.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (21.10.2008)
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Frequent mutations in the MITF pathway in melanoma
Cronin, Julia C., Wunderlich, John, Loftus, Stacie K., Prickett, Todd D., Wei, Xiaomu, Ridd, Katie, Vemula, Swapna, Burrell, Allison S., Agrawal, Neena S., Lin, Jimmy C., Banister, Carolyn E., Buckhaults, Phillip, Rosenberg, Steven A., Bastian, Boris C., Pavan, William J., Samuels, Yardena
Published in Pigment cell and melanoma research (01.08.2009)
Published in Pigment cell and melanoma research (01.08.2009)
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Comparative exome sequencing of metastatic lesions provides insights into the mutational progression of melanoma
Gartner, Jared J, Davis, Sean, Wei, Xiaomu, Lin, Jimmy C, Trivedi, Niraj S, Teer, Jamie K, Meltzer, Paul S, Rosenberg, Steven A, Samuels, Yardena
Published in BMC genomics (24.09.2012)
Published in BMC genomics (24.09.2012)
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Somatic Mutations in MAP3K5 Attenuate Its Proapoptotic Function in Melanoma through Increased Binding to Thioredoxin
Prickett, Todd D., Zerlanko, Brad, Gartner, Jared J., Parker, Stephen C.J., Dutton-Regester, Ken, Lin, Jimmy C., Teer, Jamie K., Wei, Xiaomu, Jiang, Jiji, NISC Comparative Sequencing Program, Chen, Guo, Davies, Michael A., Gershenwald, Jeffrey E., Robinson, William, Robinson, Steven, Hayward, Nicholas K., Rosenberg, Steven A., Margulies, Elliott H., Samuels, Yardena
Published in Journal of investigative dermatology (01.02.2014)
Published in Journal of investigative dermatology (01.02.2014)
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Mutational and functional analysis reveals ADAMTS18 metalloproteinase as a novel driver in melanoma
Wei, Xiaomu, Prickett, Todd D, Viloria, Cristina G, Molinolo, Alfredo, Lin, Jimmy C, Cardenas-Navia, Isabel, Cruz, Pedro, Rosenberg, Steven A, Davies, Michael A, Gershenwald, Jeffrey E, López-Otín, Carlos, Samuels, Yardena
Published in Molecular cancer research (01.11.2010)
Published in Molecular cancer research (01.11.2010)
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Mining exomic sequencing data to identify mutated antigens recognized by adoptively transferred tumor-reactive T cells
Robbins, Paul F, Lu, Yong-Chen, El-Gamil, Mona, Li, Yong F, Gross, Colin, Gartner, Jared, Lin, Jimmy C, Teer, Jamie K, Cliften, Paul, Tycksen, Eric, Samuels, Yardena, Rosenberg, Steven A
Published in Nature medicine (01.06.2013)
Published in Nature medicine (01.06.2013)
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Exome sequencing identifies GRIN2A as frequently mutated in melanoma
XIAOMU WEI, WALIA, Vijay, GERSHENWALD, Jeffrey E, ROBINSON, William, ROBINSON, Steven, ROSENBERG, Steven A, SAMUELS, Yardena, LIN, Jimmy C, TEER, Jamie K, PRICKETT, Todd D, GARTNER, Jared, DAVIS, Sean, PROGRAM, Nisc Comparative Sequencing, STEMKE-HALE, Katherine, DAVIES, Michael A
Published in Nature genetics (01.05.2011)
Published in Nature genetics (01.05.2011)
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MultiDimensional ClinOmics for Precision Therapy of Children and Adolescent Young Adults with Relapsed and Refractory Cancer: A Report from the Center for Cancer Research
Chang, Wendy, Brohl, Andrew S, Patidar, Rajesh, Sindiri, Sivasish, Shern, Jack F, Wei, Jun S, Song, Young K, Yohe, Marielle E, Gryder, Berkley, Zhang, Shile, Calzone, Kathleen A, Shivaprasad, Nityashree, Wen, Xinyu, Badgett, Thomas C, Miettinen, Markku, Hartman, Kip R, League-Pascual, James C, Trahair, Toby N, Widemann, Brigitte C, Merchant, Melinda S, Kaplan, Rosandra N, Lin, Jimmy C, Khan, Javed
Published in Clinical cancer research (01.08.2016)
Published in Clinical cancer research (01.08.2016)
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Whole-genome sequencing identifies a recurrent functional synonymous mutation in melanoma
Gartner, Jared J., Parker, Stephen C. J., Prickett, Todd D., Dutton-Regester, Ken, Stitzel, Michael L., Lin, Jimmy C., Davis, Sean, Simhadri, Vijaya L., Jha, Sujata, Katagiri, Nobuko, Gotea, Valer, Teer, Jamie K., Wei, Xiaomu, Morken, Mario A., Bhanot, Umesh K., Chen, Guo, Elnitski, Laura L., Davies, Michael A., Gershenwald, Jeffrey E., Carter, Hannah, Karchin, Rachel, Robinson, William, Robinson, Steven, Rosenberg, Steven A., Collins, Francis S., Parmigiani, Giovanni, Komar, Anton A., Kimchi-Sarfaty, Chava, Hayward, Nicholas K., Margulies, Elliott H., Samuels, Yardena
Published in Proceedings of the National Academy of Sciences - PNAS (13.08.2013)
Published in Proceedings of the National Academy of Sciences - PNAS (13.08.2013)
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Exon capture analysis of G protein-coupled receptors identifies activating mutations in GRM3 in melanoma
Samuels, Yardena, Prickett, Todd D, Wei, Xiaomu, Cardenas-Navia, Isabel, Teer, Jamie K, Lin, Jimmy C, Walia, Vijay, Gartner, Jared, Jiang, Jiji, Cherukuri, Praveen F, Molinolo, Alfredo, Davies, Michael A, Gershenwald, Jeffrey E, Stemke-Hale, Katherine, Rosenberg, Steven A, Margulies, Elliott H
Published in Nature genetics (01.11.2011)
Published in Nature genetics (01.11.2011)
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Delving into somatic variation in sporadic melanoma
Walia, Vijay, Mu, Euphemia W., Lin, Jimmy C., Samuels, Yardena
Published in Pigment cell and melanoma research (01.03.2012)
Published in Pigment cell and melanoma research (01.03.2012)
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Translational utility of next-generation sequencing
Ong, Frank S., Lin, Jimmy C., Das, Kingshuk, Grosu, Daniel S., Fan, Jian-Bing
Published in Genomics (San Diego, Calif.) (01.09.2013)
Published in Genomics (San Diego, Calif.) (01.09.2013)
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Analysis of the matrix metalloproteinase family reveals that MMP8 is often mutated in melanoma
Samuels, Yardena, Palavalli, Lavanya H, Prickett, Todd D, Wunderlich, John R, Wei, Xiaomu, Burrell, Allison S, Porter-Gill, Patricia, Davis, Sean, Wang, Chenwei, Cronin, Julia C, Agrawal, Neena S, Lin, Jimmy C, Westbroek, Wendy, Hoogstraten-Miller, Shelley, Molinolo, Alfredo A, Fetsch, Patricia, Filie, Armando C, O'Connell, Michael P, Banister, Carolyn E, Howard, Jason D, Buckhaults, Phillip, Weeraratna, Ashani T, Brody, Lawrence C, Rosenberg, Steven A
Published in Nature genetics (01.05.2009)
Published in Nature genetics (01.05.2009)
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Core Clinical Data Elements for Cancer Genomic Repositories: A Multi-stakeholder Consensus
Conley, Robert B., Dickson, Dane, Zenklusen, Jean Claude, Al Naber, Jennifer, Messner, Donna A., Atasoy, Ajlan, Chaihorsky, Lena, Collyar, Deborah, Compton, Carolyn, Ferguson, Martin, Khozin, Sean, Klein, Roger D., Kotte, Sri, Kurzrock, Razelle, Lin, C. Jimmy, Liu, Frank, Marino, Ingrid, McDonough, Robert, McNeal, Amy, Miller, Vincent, Schilsky, Richard L., Wang, Lisa I.
Published in Cell (16.11.2017)
Published in Cell (16.11.2017)
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Mutational and Functional Analysis of the Tumor-Suppressor PTPRD in Human Melanoma
Walia, Vijay, Prickett, Todd D., Kim, Jung-Sik, Gartner, Jared J., Lin, Jimmy C., Zhou, Ming, Rosenberg, Steven A., Elble, Randolph C., Solomon, David A., Waldman, Todd, Samuels, Yardena
Published in Human mutation (01.11.2014)
Published in Human mutation (01.11.2014)
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RGS7 is recurrently mutated in melanoma and promotes migration and invasion of human cancer cells
Qutob, Nouar, Masuho, Ikuo, Alon, Michal, Emmanuel, Rafi, Cohen, Isadora, Di Pizio, Antonella, Madore, Jason, Elkahloun, Abdel, Ziv, Tamar, Levy, Ronen, Gartner, Jared J, Hill, Victoria K, Lin, Jimmy C, Hevroni, Yael, Greenberg, Polina, Brodezki, Alexandra, Rosenberg, Steven A, Kosloff, Mickey, Hayward, Nicholas K, Admon, Arie, Niv, Masha Y, Scolyer, Richard A, Martemyanov, Kirill A, Samuels, Yardena
Published in Scientific reports (12.01.2018)
Published in Scientific reports (12.01.2018)
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