African ancestry-derived APOL1 risk genotypes show proximal epigenetic associations
Breeze, Charles E, Lin, Bridget M, Winkler, Cheryl A, Franceschini, Nora
Published in BMC genomics (08.05.2024)
Published in BMC genomics (08.05.2024)
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Journal Article
Selenomonas sputigena acts as a pathobiont mediating spatial structure and biofilm virulence in early childhood caries
Cho, Hunyong, Ren, Zhi, Divaris, Kimon, Roach, Jeffrey, Lin, Bridget M., Liu, Chuwen, Azcarate-Peril, M. Andrea, Simancas-Pallares, Miguel A., Shrestha, Poojan, Orlenko, Alena, Ginnis, Jeannie, North, Kari E., Zandona, Andrea G. Ferreira, Ribeiro, Apoena Aguiar, Wu, Di, Koo, Hyun
Published in Nature communications (22.05.2023)
Published in Nature communications (22.05.2023)
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Journal Article
BZINB Model-Based Pathway Analysis and Module Identification Facilitates Integration of Microbiome and Metabolome Data
Lin, Bridget M, Cho, Hunyong, Liu, Chuwen, Roach, Jeff, Ribeiro, Apoena Aguiar, Divaris, Kimon, Wu, Di
Published in Microorganisms (Basel) (01.03.2023)
Published in Microorganisms (Basel) (01.03.2023)
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Journal Article
Ancestry-driven metabolite variation provides insights into disease states in admixed populations
Reynolds, Kaylia M, Horimoto, Andrea R V R, Lin, Bridget M, Zhang, Ying, Kurniansyah, Nuzulul, Yu, Bing, Boerwinkle, Eric, Qi, Qibin, Kaplan, Robert, Daviglus, Martha, Hou, Lifang, Zhou, Laura Y, Cai, Jianwen, Shaikh, Saame Raza, Sofer, Tamar, Browning, Sharon R, Franceschini, Nora
Published in Genome medicine (17.07.2023)
Published in Genome medicine (17.07.2023)
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Journal Article
Improved Metabolite Prediction Using Microbiome Data-Based Elastic Net Models
Xie, Jialiu, Cho, Hunyong, Lin, Bridget M., Pillai, Malvika, Heimisdottir, Lara H., Bandyopadhyay, Dipankar, Zou, Fei, Roach, Jeffrey, Divaris, Kimon, Wu, Di
Published in Frontiers in cellular and infection microbiology (25.10.2021)
Published in Frontiers in cellular and infection microbiology (25.10.2021)
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Journal Article
Genetics of Chronic Kidney Disease Stages Across Ancestries: The PAGE Study
Lin, Bridget M, Nadkarni, Girish N, Tao, Ran, Graff, Mariaelisa, Fornage, Myriam, Buyske, Steven, Matise, Tara C, Highland, Heather M, Wilkens, Lynne R, Carlson, Christopher S, Park, S Lani, Setiawan, V Wendy, Ambite, Jose Luis, Heiss, Gerardo, Boerwinkle, Eric, Lin, Dan-Yu, Morris, Andrew P, Loos, Ruth J F, Kooperberg, Charles, North, Kari E, Wassel, Christina L, Franceschini, Nora
Published in Frontiers in genetics (24.05.2019)
Published in Frontiers in genetics (24.05.2019)
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Journal Article
Metabolome-wide association study of estimated glomerular filtration rates in Hispanics
Lin, Bridget M., Zhang, Ying, Yu, Bing, Boerwinkle, Eric, Thygarajan, Bharat, Yunes, Milagros, Daviglus, Martha L., Qi, Qibin, Kaplan, Robert, Lash, James, Cai, Jianwen, Sofer, Tamar, Franceschini, Nora
Published in Kidney international (01.01.2022)
Published in Kidney international (01.01.2022)
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Journal Article
Whole-exome and whole-genome sequencing of 1064 individuals with type 1 diabetes reveals novel genes for diabetic kidney disease
Haukka, Jani K, Antikainen, Anni A, Valo, Erkka, Syreeni, Anna, Dahlström, Emma H, Lin, Bridget M, Franceschini, Nora, Krolewski, Andrzej S, Harjutsalo, Valma, Groop, Per-Henrik, Sandholm, Niina
Published in Diabetologia (06.08.2024)
Published in Diabetologia (06.08.2024)
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Journal Article
Comprehensive evaluation of methods for differential expression analysis of metatranscriptomics data
Cho, Hunyong, Qu, Yixiang, Liu, Chuwen, Tang, Boyang, Lyu, Ruiqi, Lin, Bridget M, Roach, Jeffrey, Azcarate-Peril, M Andrea, Aguiar Ribeiro, Apoena, Love, Michael I, Divaris, Kimon, Wu, Di
Published in Briefings in bioinformatics (20.09.2023)
Published in Briefings in bioinformatics (20.09.2023)
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Journal Article
Predicted gene expression in ancestrally diverse populations leads to discovery of susceptibility loci for lifestyle and cardiometabolic traits
Highland, Heather M., Wojcik, Genevieve L., Graff, Mariaelisa, Nishimura, Katherine K., Hodonsky, Chani J., Baldassari, Antoine R., Cote, Alanna C., Cheng, Iona, Gignoux, Christopher R., Tao, Ran, Li, Yuqing, Boerwinkle, Eric, Fornage, Myriam, Haessler, Jeffrey, Hindorff, Lucia A., Hu, Yao, Justice, Anne E., Lin, Bridget M., Lin, Danyu, Stram, Daniel O., Haiman, Christopher A., Kooperberg, Charles, Le Marchand, Loic, Matise, Tara C., Kenny, Eimear E., Carlson, Christopher S., Stahl, Eli A., Avery, Christy L., North, Kari E., Ambite, Jose Luis, Buyske, Steven, Loos, Ruth J., Peters, Ulrike, Young, Kristin L., Bien, Stephanie A., Huckins, Laura M.
Published in American journal of human genetics (07.04.2022)
Published in American journal of human genetics (07.04.2022)
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Journal Article
Circulating Metabolites Associated with Albuminuria in a Hispanic/Latino Population
Reynolds, Kaylia M, Lin, Bridget M, Armstrong, Nicole D, Ottosson, Filip, Zhang, Ying, Williams, Ashley S, Yu, Bing, Boerwinkle, Eric, Thygarajan, Bharat, Daviglus, Martha L, Muoio, Deborah, Qi, Qibin, Kaplan, Robert, Melander, Olle, Lash, James P, Cai, Jianwen, Irvin, Marguerite R, Newgard, Christopher B, Sofer, Tamar, Franceschini, Nora
Published in Clinical journal of the American Society of Nephrology (01.02.2023)
Published in Clinical journal of the American Society of Nephrology (01.02.2023)
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Journal Article
Genome-Wide Epistatic Interaction between DEF1B and APOL1 High-Risk Genotypes for Chronic Kidney Disease
Vy, Ha My T, Lin, Bridget M, Gulamali, Faris F, Kooperberg, Charles, Graff, Mariaelisa, Wong, Jenny, Campbell, Kirk N, Matise, Tara C, Coresh, Josef, Thomas, Fridtjof, Reiner, Alexander P, Nassir, Rami, Schnatz, Peter F, Johns, Tanya, Buyske, Steven, Haiman, Christopher, Cooper, Richard, Loos, Ruth J F, Horowitz, Carol R, Gutierrez, Orlando M, Do, Ron, Franceschini, Nora, Nadkarni, Girish N
Published in Clinical journal of the American Society of Nephrology (01.10.2022)
Published in Clinical journal of the American Society of Nephrology (01.10.2022)
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Journal Article
Whole genome sequence analyses of eGFR in 23,732 people representing multiple ancestries in the NHLBI trans-omics for precision medicine (TOPMed) consortium
Lin, Bridget M, Grinde, Kelsey E, Brody, Jennifer A, Breeze, Charles E, Raffield, Laura M, Mychaleckyj, Josyf C, Thornton, Timothy A, Perry, James A, Baier, Leslie J, de las Fuentes, Lisa, Guo, Xiuqing, Heavner, Benjamin D, Hanson, Robert L, Hung, Yi-Jen, Qian, Huijun, Hsiung, Chao A, Hwang, Shih-Jen, Irvin, Margaret R, Jain, Deepti, Kelly, Tanika N, Kobes, Sayuko, Lange, Leslie, Lash, James P, Li, Yun, Liu, Xiaoming, Mi, Xuenan, Musani, Solomon K, Papanicolaou, George J, Parsa, Afshin, Reiner, Alex P, Salimi, Shabnam, Sheu, Wayne H-H, Shuldiner, Alan R, Taylor, Kent D, Smith, Albert V, Smith, Jennifer A, Tin, Adrienne, Vaidya, Dhananjay, Wallace, Robert B, Yamamoto, Kenichi, Sakaue, Saori, Matsuda, Koichi, Kamatani, Yoichiro, Momozawa, Yukihide, Yanek, Lisa R, Young, Betsi A, Zhao, Wei, Okada, Yukinori, Abecasis, Gonzalo, Psaty, Bruce M, Arnett, Donna K, Boerwinkle, Eric, Cai, Jianwen, Yii-Der Chen, Ida, Correa, Adolfo, Cupples, L Adrienne, He, Jiang, Kardia, Sharon LR, Kooperberg, Charles, Mathias, Rasika A, Mitchell, Braxton D, Nickerson, Deborah A, Turner, Steve T, Vasan, Ramachandran S, Rotter, Jerome I, Levy, Daniel, Kramer, Holly J, Köttgen, Anna, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, TOPMed Kidney Working Group, Rich, Stephen S, Lin, Dan-Yu, Browning, Sharon R, Franceschini, Nora
Published in EBioMedicine (01.01.2021)
Published in EBioMedicine (01.01.2021)
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Journal Article
Genome-wide study investigating effector genes and polygenic prediction for kidney function in persons with ancestry from Africa and the Americas
Hughes, Odessica, Bentley, Amy R., Breeze, Charles E., Aguet, Francois, Xu, Xiaoguang, Nadkarni, Girish, Sun, Quan, Lin, Bridget M., Gilliland, Thomas, Meyer, Mariah C., Du, Jiawen, Raffield, Laura M., Kramer, Holly, Morton, Robert W., Gouveia, Mateus H., Atkinson, Elizabeth G., Valladares-Salgado, Adan, Wacher-Rodarte, Niels, Dueker, Nicole D., Guo, Xiuqing, Hai, Yang, Adeyemo, Adebowale, Best, Lyle G., Cai, Jianwen, Chen, Guanjie, Chong, Michael, Doumatey, Ayo, Eales, James, Goodarzi, Mark O., Ipp, Eli, Irvin, Marguerite Ryan, Jiang, Minzhi, Jones, Alana C., Kooperberg, Charles, Krieger, Jose E., Lange, Ethan M., Lanktree, Matthew B., Lash, James P., Lotufo, Paulo A., Loos, Ruth J.F., Ha My, Vy Thi, Peralta-Romero, Jesús, Qi, Lihong, Raffel, Leslie J., Rich, Stephen S., Rodriquez, Erik J., Tarazona-Santos, Eduardo, Taylor, Kent D., Umans, Jason G., Wen, Jia, Young, Bessie A., Yu, Zhi, Zhang, Ying, Ida Chen, Yii-Der, Rundek, Tanja, Rotter, Jerome I., Cruz, Miguel, Fornage, Myriam, Lima-Costa, Maria Fernanda, Pereira, Alexandre C., Paré, Guillaume, Natarajan, Pradeep, Cole, Shelley A., Carson, April P., Lange, Leslie A., Li, Yun, Perez-Stable, Eliseo J., Do, Ron, Charchar, Fadi J., Tomaszewski, Maciej, Mychaleckyj, Josyf C., Rotimi, Charles, Morris, Andrew P., Franceschini, Nora
Published in Cell genomics (10.01.2024)
Published in Cell genomics (10.01.2024)
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Journal Article
Whole-exome sequence analysis of anthropometric traits illustrates challenges in identifying effects of rare genetic variants
Young, Kristin L., Fisher, Virginia, Deng, Xuan, Brody, Jennifer A., Graff, Misa, Lim, Elise, Lin, Bridget M., Xu, Hanfei, Amin, Najaf, An, Ping, Aslibekyan, Stella, Fohner, Alison E., Hidalgo, Bertha, Lenzini, Petra, Kraaij, Robert, Medina-Gomez, Carolina, Prokić, Ivana, Rivadeneira, Fernando, Sitlani, Colleen, Tao, Ran, van Rooij, Jeroen, Zhang, Di, Broome, Jai G., Buth, Erin J., Heavner, Benjamin D., Jain, Deepti, Smith, Albert V., Barnes, Kathleen, Boorgula, Meher Preethi, Chavan, Sameer, Darbar, Dawood, De Andrade, Mariza, Guo, Xiuqing, Haessler, Jeffrey, Irvin, Marguerite R., Kalyani, Rita R., Kardia, Sharon L.R., Kooperberg, Charles, Kim, Wonji, Mathias, Rasika A., McDonald, Merry-Lynn, Mitchell, Braxton D., Peyser, Patricia A., Regan, Elizabeth A., Redline, Susan, Reiner, Alexander P., Rich, Stephen S., Rotter, Jerome I., Smith, Jennifer A., Weiss, Scott, Wiggins, Kerri L., Yanek, Lisa R., Arnett, Donna, Heard-Costa, Nancy L., Leal, Suzanne, Lin, Danyu, McKnight, Barbara, Province, Michael, van Duijn, Cornelia M., North, Kari E., Cupples, L. Adrienne, Liu, Ching-Ti
Published in HGG advances (12.01.2023)
Published in HGG advances (12.01.2023)
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Genetic analyses of diverse populations improves discovery for complex traits
Wojcik, Genevieve L., Graff, Mariaelisa, Nishimura, Katherine K., Tao, Ran, Haessler, Jeffrey, Gignoux, Christopher R., Highland, Heather M., Patel, Yesha M., Sorokin, Elena P., Avery, Christy L., Belbin, Gillian M., Bien, Stephanie A., Cheng, Iona, Cullina, Sinead, Hodonsky, Chani J., Hu, Yao, Huckins, Laura M., Jeff, Janina, Justice, Anne E., Kocarnik, Jonathan M., Lim, Unhee, Lin, Bridget M., Lu, Yingchang, Nelson, Sarah C., Park, Sung-Shim L., Poisner, Hannah, Preuss, Michael H., Richard, Melissa A., Schurmann, Claudia, Setiawan, Veronica W., Sockell, Alexandra, Vahi, Karan, Verbanck, Marie, Vishnu, Abhishek, Walker, Ryan W., Young, Kristin L., Zubair, Niha, Acuña-Alonso, Victor, Ambite, Jose Luis, Barnes, Kathleen C., Boerwinkle, Eric, Bottinger, Erwin P., Bustamante, Carlos D., Caberto, Christian, Canizales-Quinteros, Samuel, Conomos, Matthew P., Deelman, Ewa, Do, Ron, Doheny, Kimberly, Fernández-Rhodes, Lindsay, Fornage, Myriam, Hailu, Benyam, Heiss, Gerardo, Henn, Brenna M., Hindorff, Lucia A., Jackson, Rebecca D., Laurie, Cecelia A., Laurie, Cathy C., Li, Yuqing, Lin, Dan-Yu, Moreno-Estrada, Andres, Nadkarni, Girish, Norman, Paul J., Pooler, Loreall C., Reiner, Alexander P., Romm, Jane, Sabatti, Chiara, Sandoval, Karla, Sheng, Xin, Stahl, Eli A., Stram, Daniel O., Thornton, Timothy A., Wassel, Christina L., Wilkens, Lynne R., Winkler, Cheryl A., Yoneyama, Sachi, Buyske, Steven, Haiman, Christopher A., Kooperberg, Charles, Le Marchand, Loic, Loos, Ruth J. F., Matise, Tara C., North, Kari E., Peters, Ulrike, Kenny, Eimear E., Carlson, Christopher S.
Published in Nature (London) (01.06.2019)
Published in Nature (London) (01.06.2019)
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Abstract P104: Genetic Factors Influence Glycated Hemoglobin, Fasting Glucose, and Fasting Insulin Levels in the Population Architecture Using Genomics and Epidemiology Consortium
Highland, Heather M, Bien, Stephanie, Patel, Yesha, Vishnu, Abhishek, Schurman, Claudia, Lin, Bridget M, Tao, Ran, Lin, Danyu, Liu, Simin, Phillips, Lawrence, Qi, Qibin, Rotter, Jerome I, Laurie, Cathy C, Hindorf, Lucia, Buyske, Stephen, Matise, Tara, North, Kari E, Kooperberg, Charles, Pankow, James S, Loos, Ruth J, Haiman, Christopher
Published in Circulation (New York, N.Y.) (07.03.2017)
Published in Circulation (New York, N.Y.) (07.03.2017)
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Journal Article
Genetic Diversity Turns a New PAGE in Our Understanding of Complex Traits
Wojcik, Genevieve, Graff, Mariaelisa, Nishimura, Katherine K, Tao, Ran, Haessler, Jeffrey, Gignoux, Christopher R, Highland, Heather M, Patel, Yesha M, Sorokin, Elena P, Avery, Christy L, Belbin, Gillian M, Bien, Stephanie A, Cheng, Iona, Hodonsky, Chani J, Huckins, Laura M, Janina Jeff, Justice, Anne E, Kocarnik, Jonathan M, Lim, Unhee, Lin, Bridget M, Lu, Yingchang, Nelson, Sarah C, Park, Sung-Shim L, Preuss, Michael H, Richard, Melissa A, Schurmann, Claudia, Setiawan, Veronica W, Vahi, Karan, Vishnu, Abhishek, Verbanck, Marie, Walker, Ryan, Young, Kristin L, Niha Zubair, Ambite, Jose Luis, Boerwinkle, Eric, Bottinger, Erwin, Bustamante, Carlos D, Caberto, Christian, Conomos, Matthew P, Deelman, Ewa, Do, Ron, Doheny, Kimberly, Fernandez-Rhodes, Lindsay, nage, Myriam, Heiss, Gerardo, Hindorff, Lucia A, Jackson, Rebecca D, James, Regina, Laurie, Cecelia A, Laurie, Cathy C, Li, Yuqing, Dan-Yu, Lin, Nadkarni, Girish, Pooler, Loreall C, Reiner, Alexander P, Romm, Jane, Sabati, Chiara, Sheng, Xin, Stahl, Eli A, Stram, Daniel O, Thornton, Timothy A, Wassel, Christina L, Wilkens, Lynne R, Yoneyama, Sachi, Buyske, Steven, Haiman, Chris, Kooperberg, Charles, Loic Le Marchand, Loos, Ruth Jf, Matise, Tara C, North, Kari E, Peters, Ulrike, Kenny, Eimear E, Carlson, Christopher S
Published in bioRxiv (15.09.2017)
Published in bioRxiv (15.09.2017)
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