GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
Jin, Jian-Jun, Yu, Wen-Bin, Yang, Jun-Bo, Song, Yu, dePamphilis, Claude W, Yi, Ting-Shuang, Li, De-Zhu
Published in Genome Biology (10.09.2020)
Published in Genome Biology (10.09.2020)
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Journal Article
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes
Qu, Xiao-Jian, Moore, Michael J, Li, De-Zhu, Yi, Ting-Shuang
Published in Plant methods (21.05.2019)
Published in Plant methods (21.05.2019)
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Journal Article
Diversification of Rosaceae since the Late Cretaceous based on plastid phylogenomics
Zhang, Shu‐Dong, Jin, Jian‐Jun, Chen, Si‐Yun, Chase, Mark W., Soltis, Douglas E., Li, Hong‐Tao, Yang, Jun‐Bo, Li, De‐Zhu, Yi, Ting‐Shuang
Published in The New phytologist (01.05.2017)
Published in The New phytologist (01.05.2017)
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Journal Article
Geological and ecological factors drive cryptic speciation of yews in a biodiversity hotspot
Liu, Jie, Möller, Michael, Provan, Jim, Gao, Lian‐Ming, Poudel, Ram Chandra, Li, De‐Zhu
Published in The New phytologist (01.09.2013)
Published in The New phytologist (01.09.2013)
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Journal Article
Phylogenomics and the flowering plant tree of life
Guo, Cen, Luo, Yang, Gao, Lian‐Ming, Yi, Ting‐Shuang, Li, Hong‐Tao, Yang, Jun‐Bo, Li, De‐Zhu
Published in Journal of integrative plant biology (01.02.2023)
Published in Journal of integrative plant biology (01.02.2023)
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Journal Article
Dynamics of imprinted genes and their epigenetic mechanisms in castor bean seed with persistent endosperm
Han, Bing, Li, Yelan, Wu, Di, Li, De-Zhu, Liu, Aizhong, Xu, Wei
Published in The New phytologist (01.12.2023)
Published in The New phytologist (01.12.2023)
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Journal Article
Fragaria mitogenomes evolve rapidly in structure but slowly in sequence and incur frequent multinucleotide mutations mediated by microinversions
Fan, Weishu, Liu, Fang, Jia, Qiaoya, Du, Haiyuan, Chen, Wu, Ruan, Jiwei, Lei, Jiajun, Li, De‐Zhu, Mower, Jeffrey P., Zhu, Andan
Published in The New phytologist (01.10.2022)
Published in The New phytologist (01.10.2022)
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Journal Article
Differential expression networks and inheritance patterns of long non‐coding RNAs in castor bean seeds
Xu, Wei, Yang, Tianquan, Wang, Bin, Han, Bing, Zhou, Huangkai, Wang, Yue, Li, De‐Zhu, Liu, Aizhong
Published in The Plant journal : for cell and molecular biology (01.07.2018)
Published in The Plant journal : for cell and molecular biology (01.07.2018)
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Journal Article
Insights into the historical assembly of East Asian subtropical evergreen broadleaved forests revealed by the temporal history of the tea family
Yu, Xiang‐Qin, Gao, Lian‐Ming, Soltis, Douglas E., Soltis, Pamela S., Yang, Jun‐Bo, Fang, Liang, Yang, Shi‐Xiong, Li, De‐Zhu
Published in The New phytologist (01.08.2017)
Published in The New phytologist (01.08.2017)
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Journal Article
A worldwide phylogenetic classification of the Poaceae (Gramineae) III: An update
Soreng, Robert J., Peterson, Paul M., Zuloaga, Fernando O., Romaschenko, Konstantin, Clark, Lynn G., Teisher, Jordan K., Gillespie, Lynn J., Barberá, Patricia, Welker, Cassiano A. D., Kellogg, Elizabeth A., Li, De‐Zhu, Davidse, Gerrit
Published in Journal of systematics and evolution : JSE (01.05.2022)
Published in Journal of systematics and evolution : JSE (01.05.2022)
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Journal Article
Plastid phylogenomic insights into relationships of all flowering plant families
Li, Hong-Tao, Luo, Yang, Gan, Lu, Ma, Peng-Fei, Gao, Lian-Ming, Yang, Jun-Bo, Cai, Jie, Gitzendanner, Matthew A, Fritsch, Peter W, Zhang, Ting, Jin, Jian-Jun, Zeng, Chun-Xia, Wang, Hong, Yu, Wen-Bin, Zhang, Rong, van der Bank, Michelle, Olmstead, Richard G, Hollingsworth, Peter M, Chase, Mark W, Soltis, Douglas E, Soltis, Pamela S, Yi, Ting-Shuang, Li, De-Zhu
Published in BMC biology (29.10.2021)
Published in BMC biology (29.10.2021)
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Journal Article
Greater than the sum of the parts: how the species composition in different forest strata influence ecosystem function
Luo, Ya‐Huang, Cadotte, Marc W., Burgess, Kevin S., Liu, Jie, Tan, Shao‐Lin, Zou, Jia‐Yun, Xu, Kun, Li, De‐Zhu, Gao, Lian‐Ming, Penuelas, Josep
Published in Ecology letters (01.09.2019)
Published in Ecology letters (01.09.2019)
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Journal Article
Applying DNA Barcodes to Identify Closely Related Species of Ferns: A Case Study of the Chinese Adiantum (Pteridaceae)
Wang, Fan-Hong, Lu, Jin-Mei, Wen, Jun, Ebihara, Atsushi, Li, De-Zhu
Published in PloS one (07.09.2016)
Published in PloS one (07.09.2016)
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Journal Article
Genomic insights into the origin, domestication and genetic basis of agronomic traits of castor bean
Xu, Wei, Wu, Di, Yang, Tianquan, Sun, Chao, Wang, Zaiqing, Han, Bing, Wu, Shibo, Yu, Anmin, Chapman, Mark A, Muraguri, Sammy, Tan, Qing, Wang, Wenbo, Bao, Zhigui, Liu, Aizhong, Li, De-Zhu
Published in Genome Biology (20.04.2021)
Published in Genome Biology (20.04.2021)
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Journal Article
Genome skimming herbarium specimens for DNA barcoding and phylogenomics
Zeng, Chun-Xia, Hollingsworth, Peter M, Yang, Jing, He, Zheng-Shan, Zhang, Zhi-Rong, Li, De-Zhu, Yang, Jun-Bo
Published in Plant methods (05.06.2018)
Published in Plant methods (05.06.2018)
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Journal Article
Comparative chloroplast genomes of camellia species
Yang, Jun-Bo, Yang, Shi-Xiong, Li, Hong-Tao, Yang, Jing, Li, De-Zhu
Published in PloS one (23.08.2013)
Published in PloS one (23.08.2013)
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Journal Article