Identification of bacteria-derived HLA-bound peptides in melanoma
Kalaora, Shelly, Nagler, Adi, Nejman, Deborah, Alon, Michal, Barbolin, Chaya, Barnea, Eilon, Ketelaars, Steven L. C., Cheng, Kuoyuan, Vervier, Kevin, Shental, Noam, Bussi, Yuval, Rotkopf, Ron, Levy, Ronen, Benedek, Gil, Trabish, Sophie, Dadosh, Tali, Levin-Zaidman, Smadar, Geller, Leore T., Wang, Kun, Greenberg, Polina, Yagel, Gal, Peri, Aviyah, Fuks, Garold, Bhardwaj, Neerupma, Reuben, Alexandre, Hermida, Leandro, Johnson, Sarah B., Galloway-Peña, Jessica R., Shropshire, William C., Bernatchez, Chantale, Haymaker, Cara, Arora, Reetakshi, Roitman, Lior, Eilam, Raya, Weinberger, Adina, Lotan-Pompan, Maya, Lotem, Michal, Admon, Arie, Levin, Yishai, Lawley, Trevor D., Adams, David J., Levesque, Mitchell P., Besser, Michal J., Schachter, Jacob, Golani, Ofra, Segal, Eran, Geva-Zatorsky, Naama, Ruppin, Eytan, Kvistborg, Pia, Peterson, Scott N., Wargo, Jennifer A., Straussman, Ravid, Samuels, Yardena
Published in Nature (London) (01.04.2021)
Published in Nature (London) (01.04.2021)
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Immunoproteasome expression is associated with better prognosis and response to checkpoint therapies in melanoma
Kalaora, Shelly, Lee, Joo Sang, Barnea, Eilon, Levy, Ronen, Greenberg, Polina, Alon, Michal, Yagel, Gal, Bar Eli, Gitit, Oren, Roni, Peri, Aviyah, Patkar, Sushant, Bitton, Lital, Rosenberg, Steven A., Lotem, Michal, Levin, Yishai, Admon, Arie, Ruppin, Eytan, Samuels, Yardena
Published in Nature communications (14.02.2020)
Published in Nature communications (14.02.2020)
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672 Identification of microbial-derived HLA-bound peptides in melanoma
Nagler, Adi, Kalaora, Shelly, Rosenberg, Deborah Gitta, Alon, Michal, Barnea, Eilon, Levy, Ronen, Vervier, Kevin, Trabish, Sophie, Dadosh, Tali, Zaidman, Smadar, Geller, Leore, Greenberg, Polina, Bhardwaj, Neerupma, Reuben, Alexandre, Arora, Reetakshi, Lotem, Michal, Admon, Arie, Levin, Yishai, Lawley, Trevor, Adams, David, Geva-Zatorsky, Naama, Wargo, Jennifer, Straussman, Ravid, Samuels, Yardena
Published in Journal for immunotherapy of cancer (01.11.2020)
Published in Journal for immunotherapy of cancer (01.11.2020)
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UVB-Induced Tumor Heterogeneity Diminishes Immune Response in Melanoma
Wolf, Yochai, Bartok, Osnat, Patkar, Sushant, Eli, Gitit Bar, Cohen, Sapir, Litchfield, Kevin, Levy, Ronen, Jiménez-Sánchez, Alejandro, Trabish, Sophie, Lee, Joo Sang, Karathia, Hiren, Barnea, Eilon, Day, Chi-Ping, Cinnamon, Einat, Stein, Ilan, Solomon, Adam, Bitton, Lital, Pérez-Guijarro, Eva, Dubovik, Tania, Shen-Orr, Shai S., Miller, Martin L., Merlino, Glenn, Levin, Yishai, Pikarsky, Eli, Eisenbach, Lea, Admon, Arie, Swanton, Charles, Ruppin, Eytan, Samuels, Yardena
Published in Cell (19.09.2019)
Published in Cell (19.09.2019)
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Urea Cycle Dysregulation Generates Clinically Relevant Genomic and Biochemical Signatures
Lee, Joo Sang, Adler, Lital, Karathia, Hiren, Carmel, Narin, Rabinovich, Shiran, Auslander, Noam, Keshet, Rom, Stettner, Noa, Silberman, Alon, Agemy, Lilach, Helbling, Daniel, Eilam, Raya, Sun, Qin, Brandis, Alexander, Malitsky, Sergey, Itkin, Maxim, Weiss, Hila, Pinto, Sivan, Kalaora, Shelly, Levy, Ronen, Barnea, Eilon, Admon, Arie, Dimmock, David, Stern-Ginossar, Noam, Scherz, Avigdor, Nagamani, Sandesh C.S., Unda, Miguel, Wilson, David M., Elhasid, Ronit, Carracedo, Arkaitz, Samuels, Yardena, Hannenhalli, Sridhar, Ruppin, Eytan, Erez, Ayelet
Published in Cell (06.09.2018)
Published in Cell (06.09.2018)
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Anti-tumour immunity induces aberrant peptide presentation in melanoma
Bartok, Osnat, Pataskar, Abhijeet, Nagel, Remco, Laos, Maarja, Goldfarb, Eden, Hayoun, Deborah, Levy, Ronen, Körner, Pierre-Rene, Kreuger, Inger Z. M., Champagne, Julien, Zaal, Esther A., Bleijerveld, Onno B., Huang, Xinyao, Kenski, Juliana, Wargo, Jennifer, Brandis, Alexander, Levin, Yishai, Mizrahi, Orel, Alon, Michal, Lebon, Sacha, Yang, Weiwen, Nielsen, Morten M., Stern-Ginossar, Noam, Altelaar, Maarten, Berkers, Celia R., Geiger, Tamar, Peeper, Daniel S., Olweus, Johanna, Samuels, Yardena, Agami, Reuven
Published in Nature (London) (11.02.2021)
Published in Nature (London) (11.02.2021)
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Large-Scale Immunopeptidome Analysis Reveals Recurrent Posttranslational Splicing of Cancer- and Immune-Associated Genes
Levy, Ronen, Alter Regev, Tal, Paes, Wayne, Gumpert, Nofar, Cohen Shvefel, Sapir, Bartok, Osnat, Dayan-Rubinov, Maria, Alon, Michal, Shmueli, Merav D., Levin, Yishai, Merbl, Yifat, Ternette, Nicola, Samuels, Yardena
Published in Molecular & cellular proteomics (01.04.2023)
Published in Molecular & cellular proteomics (01.04.2023)
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Genome-wide computational determination of the human metalloproteome
Azia, Ariel, Levy, Ronen, Unger, Ron, Edelman, Marvin, Sobolev, Vladimir
Published in Proteins, structure, function, and bioinformatics (01.05.2015)
Published in Proteins, structure, function, and bioinformatics (01.05.2015)
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Combined Analysis of Antigen Presentation and T-cell Recognition Reveals Restricted Immune Responses in Melanoma
Kalaora, Shelly, Wolf, Yochai, Feferman, Tali, Barnea, Eilon, Greenstein, Erez, Reshef, Dan, Tirosh, Itay, Reuben, Alexandre, Patkar, Sushant, Levy, Ronen, Quinkhardt, Juliane, Omokoko, Tana, Qutob, Nouar, Golani, Ofra, Zhang, Jianhua, Mao, Xizeng, Song, Xingzhi, Bernatchez, Chantale, Haymaker, Cara, Forget, Marie-Andrée, Creasy, Caitlin, Greenberg, Polina, Carter, Brett W, Cooper, Zachary A, Rosenberg, Steven A, Lotem, Michal, Sahin, Ugur, Shakhar, Guy, Ruppin, Eytan, Wargo, Jennifer A, Friedman, Nir, Admon, Arie, Samuels, Yardena
Published in Cancer discovery (01.11.2018)
Published in Cancer discovery (01.11.2018)
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Combined presentation and immunogenicity analysis reveals a recurrent RAS.Q61K neoantigen in melanoma
Peri, Aviyah, Greenstein, Erez, Alon, Michal, Pai, Joy A, Dingjan, Tamir, Reich-Zeliger, Shlomit, Barnea, Eilon, Barbolin, Chaya, Levy, Ronen, Arnedo-Pac, Claudia, Kalaora, Shelly, Dassa, Bareket, Feldmesser, Ester, Shang, Ping, Greenberg, Polina, Levin, Yishai, Benedek, Gil, Levesque, Mitchell P, Adams, David J, Lotem, Michal, Wilmott, James S, Scolyer, Richard A, Jönsson, Göran B, Admon, Arie, Rosenberg, Steven A, Cohen, Cyrille J, Niv, Masha Y, Lopez-Bigas, Nuria, Satpathy, Ansuman T, Friedman, Nir, Samuels, Yardena
Published in The Journal of clinical investigation (15.10.2021)
Published in The Journal of clinical investigation (15.10.2021)
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PhISCS-BnB: a fast branch and bound algorithm for the perfect tumor phylogeny reconstruction problem
Sadeqi Azer, Erfan, Rashidi Mehrabadi, Farid, Malikić, Salem, Li, Xuan Cindy, Bartok, Osnat, Litchfield, Kevin, Levy, Ronen, Samuels, Yardena, Schäffer, Alejandro A, Gertz, E Michael, Day, Chi-Ping, Pérez-Guijarro, Eva, Marie, Kerrie, Lee, Maxwell P, Merlino, Glenn, Ergun, Funda, Sahinalp, S Cenk
Published in Bioinformatics (Oxford, England) (01.07.2020)
Published in Bioinformatics (Oxford, England) (01.07.2020)
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Combined presentation and immunogenicity analysis reveals a recurrent RAS.Q61K neoantigen in melanoma
Peri, Aviyah, Greenstein, Erez, Alon, Michal, Pai, Joy A, Dingjan, Tamir, Reich-Zeliger, Shlomit, Barnea, Eilon, Barbolin, Chaya, Levy, Ronen, Arnedo-Pac, Claudia, Kalaora, Shelly, Dassa, Bareket, Feldmesser, Ester, Shang, Ping, Greenberg, Polina, Levin, Yishai, Benedek, Gil, Levesque, Mitchell P, Adams, David J, Lotem, Michal, Wilmott, James S, Scolyer, Richard A, Jönsson, Göran B, Admon, Arie, Rosenberg, Steven A, Cohen, Cyrille J, Niv, Masha Y, Lopez-Bigas, Nuria, Satpathy, Ansuman T, Friedman, Nir, Samuels, Yardena
Published in The Journal of clinical investigation (01.10.2021)
Published in The Journal of clinical investigation (01.10.2021)
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RGS7 is recurrently mutated in melanoma and promotes migration and invasion of human cancer cells
Qutob, Nouar, Masuho, Ikuo, Alon, Michal, Emmanuel, Rafi, Cohen, Isadora, Di Pizio, Antonella, Madore, Jason, Elkahloun, Abdel, Ziv, Tamar, Levy, Ronen, Gartner, Jared J., Hill, Victoria K., Lin, Jimmy C., Hevroni, Yael, Greenberg, Polina, Brodezki, Alexandra, Rosenberg, Steven A., Kosloff, Mickey, Hayward, Nicholas K., Admon, Arie, Niv, Masha Y., Scolyer, Richard A., Martemyanov, Kirill A., Samuels, Yardena
Published in Scientific reports (12.01.2018)
Published in Scientific reports (12.01.2018)
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Abstract 6737: Pharmacologic modulation of nonsense-mediated decay induces anti-tumor immunogenicity in ex vivo patient tumors
Vendramin, Roberto, Fu, Hongchang, Zhao, Yue, Fernandez-Patel, Shanila, Qian, Danwen, Ligammari, Lorena, Beattie, Gordon, Levy, Ronen, Greenberg, Polina, Bartok, Osnat, Thakkar, Krupa, Murai, Jun, Karagianni, Despoina, Sng, Chris, Shah, Mansi, Galvez-Cancino, Felipe, Djikstra, Krijn, Quezada, Sergio, Samuels, Yardena, Reading, James, Swanton, Charles, Litchfield, Kevin
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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