Changes in intestinal barrier function and gut microbiota in high-fat diet-fed rats are dynamic and region dependent
Hamilton, M Kristina, Boudry, Gaëlle, Lemay, Danielle G, Raybould, Helen E
Published in American journal of physiology: Gastrointestinal and liver physiology (15.05.2015)
Published in American journal of physiology: Gastrointestinal and liver physiology (15.05.2015)
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SAMSA2: a standalone metatranscriptome analysis pipeline
Westreich, Samuel T, Treiber, Michelle L, Mills, David A, Korf, Ian, Lemay, Danielle G
Published in BMC bioinformatics (21.05.2018)
Published in BMC bioinformatics (21.05.2018)
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Journal Article
The fecal resistome of dairy cattle is associated with diet during nursing
Liu, Jinxin, Taft, Diana H., Maldonado-Gomez, Maria X., Johnson, Daisy, Treiber, Michelle L., Lemay, Danielle G., DePeters, Edward J., Mills, David A.
Published in Nature communications (27.09.2019)
Published in Nature communications (27.09.2019)
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Pilot study of probiotic/colostrum supplementation on gut function in children with autism and gastrointestinal symptoms
Sanctuary, Megan R, Kain, Jennifer N, Chen, Shin Yu, Kalanetra, Karen, Lemay, Danielle G, Rose, Destanie R, Yang, Houa T, Tancredi, Daniel J, German, J Bruce, Slupsky, Carolyn M, Ashwood, Paul, Mills, David A, Smilowitz, Jennifer T, Angkustsiri, Kathleen
Published in PloS one (09.01.2019)
Published in PloS one (09.01.2019)
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Journal Article
RNA sequencing of the human milk fat layer transcriptome reveals distinct gene expression profiles at three stages of lactation
Lemay, Danielle G, Ballard, Olivia A, Hughes, Maria A, Morrow, Ardythe L, Horseman, Nelson D, Nommsen-Rivers, Laurie A
Published in PloS one (05.07.2013)
Published in PloS one (05.07.2013)
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Journal Article
Comparative transcriptomics reveals key differences in the response to milk oligosaccharides of infant gut-associated bifidobacteria
Garrido, Daniel, Ruiz-Moyano, Santiago, Lemay, Danielle G., Sela, David A., German, J. Bruce, Mills, David A.
Published in Scientific reports (04.09.2015)
Published in Scientific reports (04.09.2015)
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Journal Article
Human milk oligosaccharides in premature infants: absorption, excretion, and influence on the intestinal microbiota
Underwood, Mark A., Gaerlan, Stephanie, De Leoz, Maria Lorna A., Dimapasoc, Lauren, Kalanetra, Karen M., Lemay, Danielle G., German, J. Bruce, Mills, David A., Lebrilla, Carlito B.
Published in Pediatric research (01.12.2015)
Published in Pediatric research (01.12.2015)
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Journal Article
A novel gene cluster allows preferential utilization of fucosylated milk oligosaccharides in Bifidobacterium longum subsp. longum SC596
Garrido, Daniel, Ruiz-Moyano, Santiago, Kirmiz, Nina, Davis, Jasmine C., Totten, Sarah M., Lemay, Danielle G., Ugalde, Juan A., German, J. Bruce, Lebrilla, Carlito B., Mills, David A.
Published in Scientific reports (19.10.2016)
Published in Scientific reports (19.10.2016)
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Journal Article
Reservoirs of antimicrobial resistance genes in retail raw milk
Liu, Jinxin, Zhu, Yuanting, Jay-Russell, Michele, Lemay, Danielle G, Mills, David A
Published in Microbiome (26.06.2020)
Published in Microbiome (26.06.2020)
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Journal Article
Maternal fucosyltransferase 2 status affects the gut bifidobacterial communities of breastfed infants
Lewis, Zachery T, Totten, Sarah M, Smilowitz, Jennifer T, Popovic, Mina, Parker, Evan, Lemay, Danielle G, Van Tassell, Maxwell L, Miller, Michael J, Jin, Yong-Su, German, J Bruce, Lebrilla, Carlito B, Mills, David A
Published in Microbiome (10.04.2015)
Published in Microbiome (10.04.2015)
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Journal Article
Pre- and post-sequencing recommendations for functional annotation of human fecal metagenomes
Treiber, Michelle L, Taft, Diana H, Korf, Ian, Mills, David A, Lemay, Danielle G
Published in BMC bioinformatics (24.02.2020)
Published in BMC bioinformatics (24.02.2020)
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Journal Article
Association of Diet and Antimicrobial Resistance in Healthy U.S. Adults
Oliver, Andrew, Xue, Zhengyao, Villanueva, Yirui T, Durbin-Johnson, Blythe, Alkan, Zeynep, Taft, Diana H, Liu, Jinxin, Korf, Ian, Laugero, Kevin D, Stephensen, Charles B, Mills, David A, Kable, Mary E, Lemay, Danielle G
Published in mBio (10.05.2022)
Published in mBio (10.05.2022)
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Journal Article
Epigenetic Modifications Unlock the Milk Protein Gene Loci during Mouse Mammary Gland Development and Differentiation
Rijnkels, Monique, Freeman-Zadrowski, Courtneay, Hernandez, Joseph, Potluri, Vani, Wang, Liguo, Li, Wei, Lemay, Danielle G, Shioda, Toshi
Published in PloS one (02.01.2013)
Published in PloS one (02.01.2013)
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Journal Article
The collaborative effect of scientific meetings: A study of the International Milk Genomics Consortium
Kwok, Eric, Porter, Matthew, Korf, Ian, Pasin, Gonca, German, J Bruce, Lemay, Danielle G
Published in PloS one (22.08.2018)
Published in PloS one (22.08.2018)
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Journal Article
Surveying Nutrient Assessment with Photographs of Meals (SNAPMe): A Benchmark Dataset of Food Photos for Dietary Assessment
Larke, Jules A, Chin, Elizabeth L, Bouzid, Yasmine Y, Nguyen, Tu, Vainberg, Yael, Lee, Dong Hee, Pirsiavash, Hamed, Smilowitz, Jennifer T, Lemay, Danielle G
Published in Nutrients (30.11.2023)
Published in Nutrients (30.11.2023)
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Journal Article
The Development of the Davis Food Glycopedia-A Glycan Encyclopedia of Food
Castillo, Juan J, Couture, Garret, Bacalzo, Jr, Nikita P, Chen, Ye, Chin, Elizabeth L, Blecksmith, Sarah E, Bouzid, Yasmine Y, Vainberg, Yael, Masarweh, Chad, Zhou, Qingwen, Smilowitz, Jennifer T, German, J Bruce, Mills, David A, Lemay, Danielle G, Lebrilla, Carlito B
Published in Nutrients (14.04.2022)
Published in Nutrients (14.04.2022)
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