Functional organization of the hippocampal longitudinal axis
Strange, Bryan A., Witter, Menno P., Lein, Ed S., Moser, Edvard I.
Published in Nature reviews. Neuroscience (01.10.2014)
Published in Nature reviews. Neuroscience (01.10.2014)
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Functional identification of an aggression locus in the mouse hypothalamus
Lin, Dayu, Boyle, Maureen P., Dollar, Piotr, Lee, Hyosang, Lein, E. S., Perona, Pietro, Anderson, David J.
Published in Nature (London) (10.02.2011)
Published in Nature (London) (10.02.2011)
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Conservation and divergence of cortical cell organization in human and mouse revealed by MERFISH
Fang, Rongxin, Xia, Chenglong, Close, Jennie L, Zhang, Meng, He, Jiang, Huang, Zhengkai, Halpern, Aaron R, Long, Brian, Miller, Jeremy A, Lein, Ed S, Zhuang, Xiaowei
Published in Science (American Association for the Advancement of Science) (01.07.2022)
Published in Science (American Association for the Advancement of Science) (01.07.2022)
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Hybridization-based in situ sequencing (HybISS) for spatially resolved transcriptomics in human and mouse brain tissue
Gyllborg, Daniel, Langseth, Christoffer Mattsson, Qian, Xiaoyan, Choi, Eunkyoung, Salas, Sergio Marco, Hilscher, Markus M, Lein, Ed S, Nilsson, Mats
Published in Nucleic acids research (04.11.2020)
Published in Nucleic acids research (04.11.2020)
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Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons
Krishnaswami, Suguna Rani, Grindberg, Rashel V, Novotny, Mark, Venepally, Pratap, Lacar, Benjamin, Bhutani, Kunal, Linker, Sara B, Pham, Son, Erwin, Jennifer A, Miller, Jeremy A, Hodge, Rebecca, McCarthy, James K, Kelder, Martijn, McCorrison, Jamison, Aevermann, Brian D, Fuertes, Francisco Diez, Scheuermann, Richard H, Lee, Jun, Lein, Ed S, Schork, Nicholas, McConnell, Michael J, Gage, Fred H, Lasken, Roger S
Published in Nature protocols (01.03.2016)
Published in Nature protocols (01.03.2016)
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Coexpression Networks Implicate Human Midfetal Deep Cortical Projection Neurons in the Pathogenesis of Autism
Willsey, A. Jeremy, Sanders, Stephan J., Li, Mingfeng, Dong, Shan, Tebbenkamp, Andrew T., Muhle, Rebecca A., Reilly, Steven K., Lin, Leon, Fertuzinhos, Sofia, Miller, Jeremy A., Murtha, Michael T., Bichsel, Candace, Niu, Wei, Cotney, Justin, Ercan-Sencicek, A. Gulhan, Gockley, Jake, Gupta, Abha R., Han, Wenqi, He, Xin, Hoffman, Ellen J., Klei, Lambertus, Lei, Jing, Liu, Wenzhong, Liu, Li, Lu, Cong, Xu, Xuming, Zhu, Ying, Mane, Shrikant M., Lein, Ed S., Wei, Liping, Noonan, James P., Roeder, Kathryn, Devlin, Bernie, Sestan, Nenad, State, Matthew W.
Published in Cell (21.11.2013)
Published in Cell (21.11.2013)
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Transcriptomic Perspectives on Neocortical Structure, Development, Evolution, and Disease
Lein, Ed S, Belgard, T. Grant, Hawrylycz, Michael, Molnár, Zoltán
Published in Annual review of neuroscience (25.07.2017)
Published in Annual review of neuroscience (25.07.2017)
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Genetic identification of brain cell types underlying schizophrenia
Skene, Nathan G., Bryois, Julien, Bakken, Trygve E., Breen, Gerome, Crowley, James J., Gaspar, Héléna A., Giusti-Rodriguez, Paola, Hodge, Rebecca D., Miller, Jeremy A., Muñoz-Manchado, Ana B., O’Donovan, Michael C., Owen, Michael J., Pardiñas, Antonio F., Ryge, Jesper, Walters, James T. R., Linnarsson, Sten, Lein, Ed S., Sullivan, Patrick F., Hjerling-Leffler, Jens
Published in Nature genetics (01.06.2018)
Published in Nature genetics (01.06.2018)
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Single-nucleus and single-cell transcriptomes compared in matched cortical cell types
Bakken, Trygve E, Hodge, Rebecca D, Miller, Jeremy A, Yao, Zizhen, Nguyen, Thuc Nghi, Aevermann, Brian, Barkan, Eliza, Bertagnolli, Darren, Casper, Tamara, Dee, Nick, Garren, Emma, Goldy, Jeff, Graybuck, Lucas T, Kroll, Matthew, Lasken, Roger S, Lathia, Kanan, Parry, Sheana, Rimorin, Christine, Scheuermann, Richard H, Schork, Nicholas J, Shehata, Soraya I, Tieu, Michael, Phillips, John W, Bernard, Amy, Smith, Kimberly A, Zeng, Hongkui, Lein, Ed S, Tasic, Bosiljka
Published in PloS one (26.12.2018)
Published in PloS one (26.12.2018)
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A robust and high-throughput Cre reporting and characterization system for the whole mouse brain
Zeng, Hongkui, Madisen, Linda, Zwingman, Theresa A, Sunkin, Susan M, Oh, Seung Wook, Zariwala, Hatim A, Gu, Hong, Ng, Lydia L, Palmiter, Richard D, Hawrylycz, Michael J, Jones, Allan R, Lein, Ed S
Published in Nature neuroscience (01.01.2010)
Published in Nature neuroscience (01.01.2010)
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Large-Scale Cellular-Resolution Gene Profiling in Human Neocortex Reveals Species-Specific Molecular Signatures
Zeng, Hongkui, Shen, Elaine H., Hohmann, John G., Oh, Seung Wook, Bernard, Amy, Royall, Joshua J., Glattfelder, Katie J., Sunkin, Susan M., Morris, John A., Guillozet-Bongaarts, Angela L., Smith, Kimberly A., Ebbert, Amanda J., Swanson, Beryl, Kuan, Leonard, Page, Damon T., Overly, Caroline C., Lein, Ed S., Hawrylycz, Michael J., Hof, Patrick R., Hyde, Thomas M., Kleinman, Joel E., Jones, Allan R.
Published in Cell (13.04.2012)
Published in Cell (13.04.2012)
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Signature morpho-electric, transcriptomic, and dendritic properties of human layer 5 neocortical pyramidal neurons
Kalmbach, Brian E., Hodge, Rebecca D., Jorstad, Nikolas L., Owen, Scott, de Frates, Rebecca, Yanny, Anna Marie, Dalley, Rachel, Mallory, Matt, Graybuck, Lucas T., Radaelli, Cristina, Keene, C. Dirk, Gwinn, Ryder P., Silbergeld, Daniel L., Cobbs, Charles, Ojemann, Jeffrey G., Ko, Andrew L., Patel, Anoop P., Ellenbogen, Richard G., Bakken, Trygve E., Daigle, Tanya L., Dee, Nick, Lee, Brian R., McGraw, Medea, Nicovich, Philip R., Smith, Kimberly, Sorensen, Staci A., Tasic, Bosiljka, Zeng, Hongkui, Koch, Christof, Lein, Ed S., Ting, Jonathan T.
Published in Neuron (Cambridge, Mass.) (15.09.2021)
Published in Neuron (Cambridge, Mass.) (15.09.2021)
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Common cell type nomenclature for the mammalian brain
Miller, Jeremy A, Gouwens, Nathan W, Tasic, Bosiljka, Collman, Forrest, van Velthoven, Cindy Tj, Bakken, Trygve E, Hawrylycz, Michael J, Zeng, Hongkui, Lein, Ed S, Bernard, Amy
Published in eLife (29.12.2020)
Published in eLife (29.12.2020)
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Parallel RNA and DNA analysis after deep sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain
Huang, August Yue, Li, Pengpeng, Rodin, Rachel E., Kim, Sonia N., Dou, Yanmei, Kenny, Connor J., Akula, Shyam K., Hodge, Rebecca D., Bakken, Trygve E., Miller, Jeremy A., Lein, Ed S., Park, Peter J., Lee, Eunjung Alice, Walsh, Christopher A.
Published in Proceedings of the National Academy of Sciences - PNAS (23.06.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (23.06.2020)
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Transcriptomic evidence that von Economo neurons are regionally specialized extratelencephalic-projecting excitatory neurons
Hodge, Rebecca D., Miller, Jeremy A., Novotny, Mark, Kalmbach, Brian E., Ting, Jonathan T., Bakken, Trygve E., Aevermann, Brian D., Barkan, Eliza R., Berkowitz-Cerasano, Madeline L., Cobbs, Charles, Diez-Fuertes, Francisco, Ding, Song-Lin, McCorrison, Jamison, Schork, Nicholas J., Shehata, Soraya I., Smith, Kimberly A., Sunkin, Susan M., Tran, Danny N., Venepally, Pratap, Yanny, Anna Marie, Steemers, Frank J., Phillips, John W., Bernard, Amy, Koch, Christof, Lasken, Roger S., Scheuermann, Richard H., Lein, Ed S.
Published in Nature communications (03.03.2020)
Published in Nature communications (03.03.2020)
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A comparison of anatomic and cellular transcriptome structures across 40 human brain diseases
Zeighami, Yashar, Bakken, Trygve E, Nickl-Jockschat, Thomas, Peterson, Zeru, Jegga, Anil G, Miller, Jeremy A, Schulkin, Jay, Evans, Alan C, Lein, Ed S, Hawrylycz, Michael
Published in PLoS biology (20.04.2023)
Published in PLoS biology (20.04.2023)
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Distinct Transcriptomic Cell Types and Neural Circuits of the Subiculum and Prosubiculum along the Dorsal-Ventral Axis
Ding, Song-Lin, Yao, Zizhen, Hirokawa, Karla E., Nguyen, Thuc Nghi, Graybuck, Lucas T., Fong, Olivia, Bohn, Phillip, Ngo, Kiet, Smith, Kimberly A., Koch, Christof, Phillips, John W., Lein, Ed S., Harris, Julie A., Tasic, Bosiljka, Zeng, Hongkui
Published in Cell reports (Cambridge) (19.05.2020)
Published in Cell reports (Cambridge) (19.05.2020)
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Transcriptomic diversity of cell types across the adult human brain
Siletti, Kimberly, Hodge, Rebecca, Mossi Albiach, Alejandro, Lee, Ka Wai, Ding, Song-Lin, Hu, Lijuan, Lönnerberg, Peter, Bakken, Trygve, Casper, Tamara, Clark, Michael, Dee, Nick, Gloe, Jessica, Hirschstein, Daniel, Shapovalova, Nadiya V, Keene, C Dirk, Nyhus, Julie, Tung, Herman, Yanny, Anna Marie, Arenas, Ernest, Lein, Ed S, Linnarsson, Sten
Published in Science (American Association for the Advancement of Science) (13.10.2023)
Published in Science (American Association for the Advancement of Science) (13.10.2023)
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Functional gene delivery to and across brain vasculature of systemic AAVs with endothelial-specific tropism in rodents and broad tropism in primates
Chen, Xinhong, Wolfe, Damien A., Bindu, Dhanesh Sivadasan, Zhang, Mengying, Taskin, Naz, Goertsen, David, Shay, Timothy F., Sullivan, Erin E., Huang, Sheng-Fu, Ravindra Kumar, Sripriya, Arokiaraj, Cynthia M., Plattner, Viktor M., Campos, Lillian J., Mich, John K., Monet, Deja, Ngo, Victoria, Ding, Xiaozhe, Omstead, Victoria, Weed, Natalie, Bishaw, Yeme, Gore, Bryan B., Lein, Ed S., Akrami, Athena, Miller, Cory, Levi, Boaz P., Keller, Annika, Ting, Jonathan T., Fox, Andrew S., Eroglu, Cagla, Gradinaru, Viviana
Published in Nature communications (08.06.2023)
Published in Nature communications (08.06.2023)
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Cortical fast-spiking parvalbumin interneurons enwrapped in the perineuronal net express the metallopeptidases Adamts8, Adamts15 and Neprilysin
Rossier, J, Bernard, A, Cabungcal, J-H, Perrenoud, Q, Savoye, A, Gallopin, T, Hawrylycz, M, Cuénod, M, Do, K, Urban, A, Lein, Ed S
Published in Molecular psychiatry (01.02.2015)
Published in Molecular psychiatry (01.02.2015)
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