by Lees, John A, Galardini, Marco, Bentley, Stephen D, Weiser, Jeffrey N, Corander, Jukka
Published in Bioinformatics (15.12.2018)

by Tonkin-Hill, Gerry, MacAlasdair, Neil, Ruis, Christopher, Weimann, Aaron, Horesh, Gal, Lees, John A., Gladstone, Rebecca A., Lo, Stephanie, Beaudoin, Christopher, Floto, R. Andres, Frost, Simon D.W., Corander, Jukka, Bentley, Stephen D., Parkhill, Julian
Published in Genome Biology (22.07.2020)

by Tonkin-Hill, Gerry, Lees, John A, Bentley, Stephen D, Frost, Simon D W, Corander, Jukka
Published in Nucleic acids research (20.06.2019)

by Lees, John A., Vehkala, Minna, Välimäki, Niko, Harris, Simon R., Chewapreecha, Claire, Croucher, Nicholas J., Marttinen, Pekka, Davies, Mark R., Steer, Andrew C., Tong, Steven Y. C., Honkela, Antti, Parkhill, Julian, Bentley, Stephen D., Corander, Jukka
Published in Nature communications (16.09.2016)

by Binsker, Ulrike, Lees, John A, Hammond, Alexandria J, Weiser, Jeffrey N
Published in The Journal of clinical investigation (01.02.2020)

by Lees, John A, Mai, T Tien, Galardini, Marco, Wheeler, Nicole E, Horsfield, Samuel T, Parkhill, Julian, Corander, Jukka
Published in mBio (07.07.2020)

by Pöntinen, Anna K., Top, Janetta, Arredondo-Alonso, Sergio, Tonkin-Hill, Gerry, Freitas, Ana R., Novais, Carla, Gladstone, Rebecca A., Pesonen, Maiju, Meneses, Rodrigo, Pesonen, Henri, Lees, John A., Jamrozy, Dorota, Bentley, Stephen D., Lanza, Val F., Torres, Carmen, Peixe, Luisa, Coque, Teresa M., Parkhill, Julian, Schürch, Anita C., Willems, Rob J. L., Corander, Jukka
Published in Nature communications (09.03.2021)

by Knock, Edward S, Whittles, Lilith K, Lees, John A, Perez-Guzman, Pablo N, Verity, Robert, FitzJohn, Richard G, Gaythorpe, Katy A M, Imai, Natsuko, Hinsley, Wes, Okell, Lucy C, Rosello, Alicia, Kantas, Nikolas, Walters, Caroline E, Bhatia, Sangeeta, Watson, Oliver J, Whittaker, Charlie, Cattarino, Lorenzo, Boonyasiri, Adhiratha, Djaafara, Bimandra A, Fraser, Keith, Fu, Han, Wang, Haowei, Xi, Xiaoyue, Donnelly, Christl A, Jauneikaite, Elita, Laydon, Daniel J, White, Peter J, Ghani, Azra C, Ferguson, Neil M, Cori, Anne, Baguelin, Marc
Published in Science Translational Medicine (14.07.2021)

by Tonkin-Hill, Gerry, Lees, John A, Bentley, Stephen D, Frost, Simon D W, Corander, Jukka
Published in Wellcome open research (2018)

by Lees, John A, Croucher, Nicholas J, Goldblatt, David, Nosten, François, Parkhill, Julian, Turner, Claudia, Turner, Paul, Bentley, Stephen D
Published in eLife (25.07.2017)

by Watson, Oliver J., Alhaffar, Mervat, Mehchy, Zaki, Whittaker, Charles, Akil, Zack, Brazeau, Nicholas F., Cuomo-Dannenburg, Gina, Hamlet, Arran, Thompson, Hayley A., Baguelin, Marc, FitzJohn, Richard G., Knock, Edward, Lees, John A., Whittles, Lilith K., Mellan, Thomas, Winskill, Peter, Howard, Natasha, Clapham, Hannah, Checchi, Francesco, Ferguson, Neil, Ghani, Azra, Beals, Emma, Walker, Patrick
Published in Nature communications (22.04.2021)

by Chapman, Lloyd A. C., Aubry, Maite, Maset, Noémie, Russell, Timothy W., Knock, Edward S., Lees, John A., Mallet, Henri-Pierre, Cao-Lormeau, Van-Mai, Kucharski, Adam J.
Published in Nature communications (13.11.2023)

by Xie, Ouli, Morris, Jacqueline M., Hayes, Andrew J., Towers, Rebecca J., Jespersen, Magnus G., Lees, John A., Ben Zakour, Nouri L., Berking, Olga, Baines, Sarah L., Carter, Glen P., Tonkin-Hill, Gerry, Schrieber, Layla, McIntyre, Liam, Lacey, Jake A., James, Taylah B., Sriprakash, Kadaba S., Beatson, Scott A., Hasegawa, Tadao, Giffard, Phil, Steer, Andrew C., Batzloff, Michael R., Beall, Bernard W., Pinho, Marcos D., Ramirez, Mario, Bessen, Debra E., Dougan, Gordon, Bentley, Stephen D., Walker, Mark J., Currie, Bart J., Tong, Steven Y. C., McMillan, David J., Davies, Mark R.
Published in Nature communications (13.03.2024)

by Gladstone, Rebecca A, McNally, Alan, Pöntinen, Anna K, Tonkin-Hill, Gerry, Lees, John A, Skytén, Kusti, Cléon, François, Christensen, Martin O K, Haldorsen, Bjørg C, Bye, Kristina K, Gammelsrud, Karianne W, Hjetland, Reidar, Kümmel, Angela, Larsen, Hege E, Lindemann, Paul Christoffer, Löhr, Iren H, Marvik, Åshild, Nilsen, Einar, Noer, Marie T, Simonsen, Gunnar S, Steinbakk, Martin, Tofteland, Ståle, Vattøy, Marit, Bentley, Stephen D, Croucher, Nicholas J, Parkhill, Julian, Johnsen, Pål J, Samuelsen, Ørjan, Corander, Jukka
Published in The Lancet. Microbe (01.07.2021)

by Lees, John A., Kendall, Michelle, Parkhill, Julian, Colijn, Caroline, Bentley, Stephen D., Harris, Simon R.
Published in Wellcome open research (2018)

by Kremer, Philip H C, Ferwerda, Bart, Bootsma, Hester J, Rots, Nienke Y, Wijmenga-Monsuur, Alienke J, Sanders, Elisabeth A M, Trzciński, Krzysztof, Wyllie, Anne L, Turner, Paul, van der Ende, Arie, Brouwer, Matthijs C, Bentley, Stephen D, van de Beek, Diederik, Lees, John A
Published in eLife (26.07.2022)

by Zangari, Tonia, Zafar, M. Ammar, Lees, John A., Abruzzo, Annie R., Bee, Gavyn Chern Wei, Weiser, Jeffrey N.
Published in npj vaccines (20.12.2021)

by Kremer, Philip H C, Lees, John A, Ferwerda, Bart, van de Ende, Arie, Brouwer, Matthijs C, Bentley, Stephen D, van de Beek, Diederik
Published in Frontiers in medicine (11.11.2020)

by Puranen, Santeri, Pesonen, Maiju, Pensar, Johan, Xu, Ying Ying, Lees, John A, Bentley, Stephen D, Croucher, Nicholas J, Corander, Jukka
Published in Microbial genomics (01.06.2018)

by Lees, John A, Harris, Simon R, Tonkin-Hill, Gerry, Gladstone, Rebecca A, Lo, Stephanie W, Weiser, Jeffrey N, Corander, Jukka, Bentley, Stephen D, Croucher, Nicholas J
Published in Genome research (01.02.2019)