by Chu, Helen Y, Englund, Janet A, Starita, Lea M, Famulare, Michael, Brandstetter, Elisabeth, Nickerson, Deborah A, Rieder, Mark J, Adler, Amanda, Lacombe, Kirsten, Kim, Ashley E, Graham, Chelsey, Logue, Jennifer, Wolf, Caitlin R, Heimonen, Jessica, McCulloch, Denise J, Han, Peter D, Sibley, Thomas R, Lee, Jover, Ilcisin, Misja, Fay, Kairsten, Burstein, Roy, Martin, Beth, Lockwood, Christina M, Thompson, Matthew, Lutz, Barry, Jackson, Michael, Hughes, James P, Boeckh, Michael, Shendure, Jay, Bedford, Trevor
Published in New England Journal of Medicine (09.07.2020)

by Rogers, Julia H, Link, Amy C, McCulloch, Denise, Brandstetter, Elisabeth, Newman, Kira L, Jackson, Michael L, Hughes, James P, Englund, Janet A, Boeckh, Michael, Sugg, Nancy, Ilcisin, Misja, Sibley, Thomas R, Fay, Kairsten, Lee, Jover, Han, Peter, Truong, Melissa, Richardson, Matthew, Nickerson, Deborah A, Starita, Lea M, Bedford, Trevor, Chu, Helen Y
Published in Annals of Internal Medicine (01.01.2021)

by Paredes, Miguel I, Perofsky, Amanda C, Frisbie, Lauren, Moncla, Louise H, Roychoudhury, Pavitra, Xie, Hong, Bakhash, Shah A Mohamed, Kong, Kevin, Arnould, Isabel, Nguyen, Tien V, Wendm, Seffir T, Hajian, Pooneh, Ellis, Sean, Mathias, Patrick C, Greninger, Alexander L, Starita, Lea M, Frazar, Chris D, Ryke, Erica, Zhong, Weizhi, Gamboa, Luis, Threlkeld, Machiko, Lee, Jover, Stone, Jeremy, McDermot, Evan, Truong, Melissa, Shendure, Jay, Oltean, Hanna N, Viboud, Cécile, Chu, Helen, Müller, Nicola F, Bedford, Trevor
Published in PLoS pathogens (01.03.2024)

by Iwu, Chidozie D, Cox, Sarah N, Sohlberg, Sarah L, Kim, Ashley E, Logue, Jennifer, Han, Peter D, Sibley, Thomas R, Ilcisin, Misja, Fay, Kairsten A, Lee, Jover, McCulloch, Denise J, Wang, Yongzhe, Boeckh, Michael, Englund, Janet A, Starita, Lea M, Hajat, Anjum, Chu, Helen Y
Published in PloS one (10.09.2024)

by Jackson, Michael L, Hart, Gregory R, McCulloch, Denise J, Adler, Amanda, Brandstetter, Elisabeth, Fay, Kairsten, Han, Peter, Lacombe, Kirsten, Lee, Jover, Sibley, Thomas R, Nickerson, Deborah A, Rieder, Mark J, Starita, Lea, Englund, Janet A, Bedford, Trevor, Chu, Helen, Famulare, Michael
Published in BMC infectious diseases (09.04.2021)

by Perofsky, Amanda C., Hansen, Chelsea L., Burstein, Roy, Boyle, Shanda, Prentice, Robin, Marshall, Cooper, Reinhart, David, Capodanno, Ben, Truong, Melissa, Schwabe-Fry, Kristen, Kuchta, Kayla, Pfau, Brian, Acker, Zack, Lee, Jover, Sibley, Thomas R., McDermot, Evan, Rodriguez-Salas, Leslie, Stone, Jeremy, Gamboa, Luis, Han, Peter D., Adler, Amanda, Waghmare, Alpana, Jackson, Michael L., Famulare, Michael, Shendure, Jay, Bedford, Trevor, Chu, Helen Y., Englund, Janet A., Starita, Lea M., Viboud, Cécile
Published in Nature communications (16.05.2024)

by Lee, Jover, Hadfield, James, Black, Allison, Sibley, Thomas R, Neher, Richard A, Bedford, Trevor, Huddleston, John
Published in Frontiers in bioinformatics (22.03.2023)

by Hansen, Chelsea, Perofsky, Amanda C, Burstein, Roy, Famulare, Michael, Boyle, Shanda, Prentice, Robin, Marshall, Cooper, McCormick, Benjamin J J, Reinhart, David, Capodanno, Ben, Truong, Melissa, Schwabe-Fry, Kristen, Kuchta, Kayla, Pfau, Brian, Acker, Zack, Lee, Jover, Sibley, Thomas R, McDermot, Evan, Rodriguez-Salas, Leslie, Stone, Jeremy, Gamboa, Luis, Han, Peter D, Duchin, Jeffery S, Waghmare, Alpana, Englund, Janet A, Shendure, Jay, Bedford, Trevor, Chu, Helen Y, Starita, Lea M, Viboud, Cécile
Published in JAMA network open (01.12.2022)

by Bennett, Julia C, Emanuels, Anne, Heimonen, Jessica, O'Hanlon, Jessica, Hughes, James P, Han, Peter D, Chow, Eric J, Ogokeh, Constance E, Rolfes, Melissa A, Lockwood, Christine M, Pfau, Brian, Uyeki, Timothy M, Shendure, Jay, Hoag, Samara, Fay, Kairsten, Lee, Jover, Sibley, Thomas R, Rogers, Julia H, Starita, Lea M, Englund, Janet A, Chu, Helen Y
Published in Frontiers in pediatrics (07.07.2023)

by Bedford, Trevor, Greninger, Alexander L, Roychoudhury, Pavitra, Starita, Lea M, Famulare, Michael, Huang, Meei-Li, Nalla, Arun, Pepper, Gregory, Reinhardt, Adam, Xie, Hong, Shrestha, Lasata, Nguyen, Truong N, Adler, Amanda, Brandstetter, Elisabeth, Cho, Shari, Giroux, Danielle, Han, Peter D, Fay, Kairsten, Frazar, Chris D, Ilcisin, Misja, Lacombe, Kirsten, Lee, Jover, Kiavand, Anahita, Richardson, Matthew, Sibley, Thomas R, Truong, Melissa, Wolf, Caitlin R, Nickerson, Deborah A, Rieder, Mark J, Englund, Janet A, Hadfield, James, Hodcroft, Emma B, Huddleston, John, Moncla, Louise H, Müller, Nicola F, Neher, Richard A, Deng, Xianding, Gu, Wei, Federman, Scot, Chiu, Charles, Duchin, Jeffrey S, Gautom, Romesh, Melly, Geoff, Hiatt, Brian, Dykema, Philip, Lindquist, Scott, Queen, Krista, Tao, Ying, Uehara, Anna, Tong, Suxiang, MacCannell, Duncan, Armstrong, Gregory L, Baird, Geoffrey S, Chu, Helen Y, Shendure, Jay, Jerome, Keith R
Published in Science (30.10.2020)

by Paredes, Miguel I, Lunn, Stephanie M, Famulare, Michael, Frisbie, Lauren A, Painter, Ian, Burstein, Roy, Roychoudhury, Pavitra, Xie, Hong, Mohamed Bakhash, Shah A, Perez, Ricardo, Lukes, Maria, Ellis, Sean, Sathees, Saraswathi, Mathias, Patrick C, Greninger, Alexander, Starita, Lea M, Frazar, Chris D, Ryke, Erica, Zhong, Weizhi, Gamboa, Luis, Threlkeld, Machiko, Lee, Jover, McDermot, Evan, Truong, Melissa, Nickerson, Deborah A, Bates, Daniel L, Hartman, Matthew E, Haugen, Eric, Nguyen, Truong N, Richards, Joshua D, Rodriguez, Jacob L, Stamatoyannopoulos, John A, Thorland, Eric, Melly, Geoff, Dykema, Philip E, MacKellar, Drew C, Gray, Hannah K, Singh, Avi, Peterson, JohnAric M, Russell, Denny, Torres, Laura Marcela, Lindquist, Scott, Bedford, Trevor, Allen, Krisandra J, Oltean, Hanna N
Published in Clinical infectious diseases (24.08.2022)

by Müller, Nicola F, Wagner, Cassia, Frazar, Chris D, Roychoudhury, Pavitra, Lee, Jover, Moncla, Louise H, Pelle, Benjamin, Richardson, Matthew, Ryke, Erica, Xie, Hong, Shrestha, Lasata, Addetia, Amin, Rachleff, Victoria M, Lieberman, Nicole A P, Huang, Meei-Li, Gautom, Romesh, Melly, Geoff, Hiatt, Brian, Dykema, Philip, Adler, Amanda, Brandstetter, Elisabeth, Han, Peter D, Fay, Kairsten, Ilcisin, Misja, Lacombe, Kirsten, Sibley, Thomas R, Truong, Melissa, Wolf, Caitlin R, Boeckh, Michael, Englund, Janet A, Famulare, Michael, Lutz, Barry R, Rieder, Mark J, Thompson, Matthew, Duchin, Jeffrey S, Starita, Lea M, Chu, Helen Y, Shendure, Jay, Jerome, Keith R, Lindquist, Scott, Greninger, Alexander L, Nickerson, Deborah A, Bedford, Trevor
Published in Science Translational Medicine (26.05.2021)

by Kim, Ashley E, Brandstetter, Elisabeth, Wilcox, Naomi, Heimonen, Jessica, Graham, Chelsey, Han, Peter D, Starita, Lea M, McCulloch, Denise J, Casto, Amanda M, Nickerson, Deborah A, Van de Loo, Margaret M, Mooney, Jennifer, Ilcisin, Misja, Fay, Kairsten A, Lee, Jover, Sibley, Thomas R, Lyon, Victoria, Geyer, Rachel E, Thompson, Matthew, Lutz, Barry R, Rieder, Mark J, Bedford, Trevor, Boeckh, Michael, Englund, Janet A, Chu, Helen Y
Published in Journal of clinical microbiology (20.04.2021)

by Huddleston, John, Hadfield, James, Sibley, Thomas, Lee, Jover, Fay, Kairsten, Ilcisin, Misja, Harkins, Elias, Bedford, Trevor, Neher, Richard, Hodcroft, Emma
Published in Journal of open source software (01.01.2021)

by Weil, Ana A, Sohlberg, Sarah L, O’Hanlon, Jessica A, Casto, Amanda M, Emanuels, Anne W, Lo, Natalie K, Greismer, Emily P, Magedson, Ariana M, Wilcox, Naomi C, Kim, Ashley E, Back, Lewis, Frazar, Christian D, Pelle, Ben, Sibley, Thomas R, Ilcisin, Misja, Lee, Jover, Ryke, Erica L, Craft, J Chris, Schwabe-Fry, Kristen M, Fay, Kairsten A, Cho, Shari, Han, Peter D, Heidl, Sarah J, Pfau, Brian A, Truong, Melissa, Zhong, Weizhi, Srivatsan, Sanjay R, Harb, Katia F, Gottlieb, Geoffrey S, Hughes, James P, Nickerson, Deborah A, Lockwood, Christina M, Starita, Lea M, Bedford, Trevor, Shendure, Jay A, Chu, Helen Y
Published in Open forum infectious diseases (01.11.2021)

by Paredes, Miguel I, Lunn, Stephanie M, Famulare, Michael, Frisbie, Lauren A, Painter, Ian, Burstein, Roy, Roychoudhury, Pavitra, Xie, Hong, Mohamed Bakhash, Shah A, Perez, Ricardo, Lukes, Maria, Ellis, Sean, Sathees, Saraswathi, Mathias, Patrick C, Greninger, Alexander, Starita, Lea M, Frazar, Chris D, Ryke, Erica, Zhong, Weizhi, Gamboa, Luis, Threlkeld, Machiko, Lee, Jover, McDermot, Evan, Truong, Melissa, Nickerson, Deborah A, Bates, Daniel L, Hartman, Matthew E, Haugen, Eric, Nguyen, Truong N, Richards, Joshua D, Rodriguez, Jacob L, Stamatoyannopoulos, John A, Thorland, Eric, Melly, Geoff, Dykema, Philip E, MacKellar, Drew C, Gray, Hannah K, Singh, Avi, Peterson, JohnAric M, Russell, Denny, Marcela Torres, Laura, Lindquist, Scott, Bedford, Trevor, Allen, Krisandra J, Oltean, Hanna N
Published in Clinical infectious diseases (12.04.2022)

by Paredes, Miguel I, Perofsky, Amanda C, Frisbie, Lauren, Moncla, Louise H, Roychoudhury, Pavitra, Xie, Hong, Mohamed Bakhash, Shah A, Kong, Kevin, Arnould, Isabel, Nguyen, Tien V, Wendm, Seffir T, Hajian, Pooneh, Ellis, Sean, Mathias, Patrick C, Greninger, Alexander L, Starita, Lea M, Frazar, Chris D, Ryke, Erica, Zhong, Weizhi, Gamboa, Luis, Threlkeld, Machiko, Lee, Jover, Stone, Jeremy, McDermot, Evan, Truong, Melissa, Shendure, Jay, Oltean, Hanna N, Viboud, Cécile, Chu, Helen, Müller, Nicola F, Bedford, Trevor
Published in medRxiv : the preprint server for health sciences (16.12.2022)

by Burstein, Roy, Althouse, Benjamin M, Adler, Amanda, Akullian, Adam, Brandstetter, Elizabeth, Cho, Shari, Emanuels, Anne, Fay, Kairsten, Gamboa, Luis, Han, Peter, Huden, Kristen, Ilcisin, Misja, Izzo, Mandy, Jackson, Michael L, Kim, Ashley E, Kimball, Louise, Lacombe, Kirsten, Lee, Jover, Logue, Jennifer K, Rogers, Julia, Chung, Erin, Sibley, Thomas R, Van Raay, Katrina, Wenger, Edward, Wolf, Caitlin R, Boeckh, Michael, Chu, Helen, Duchin, Jeff, Rieder, Mark, Shendure, Jay, Starita, Lea M, Viboud, Cecile, Bedford, Trevor, Englund, Janet A, Famulare, Michael
Published in medRxiv : the preprint server for health sciences (06.02.2022)

by Paredes, Miguel I, Lunn, Stephanie M, Famulare, Michael, Frisbie, Lauren A, Painter, Ian, Burstein, Roy, Roychoudhury, Pavitra, Xie, Hong, Mohamed Bakhash, Shah A, Perez, Ricardo, Lukes, Maria, Ellis, Sean, Sathees, Saraswathi, Mathias, Patrick C, Greninger, Alexander, Starita, Lea M, Frazar, Chris D, Ryke, Erica, Zhong, Weizhi, Gamboa, Luis, Threlkeld, Machiko, Lee, Jover, McDermot, Evan, Truong, Melissa, Nickerson, Deborah A, Bates, Daniel L, Hartman, Matthew E, Haugen, Eric, Nguyen, Truong N, Richards, Joshua D, Rodriguez, Jacob L, Stamatoyannopoulos, John A, Thorland, Eric, Melly, Geoff, Dykema, Philip E, MacKellar, Drew C, Gray, Hannah K, Singh, Avi, Peterson, JohnAric M, Russell, Denny, Torres, Laura Marcela, Lindquist, Scott, Bedford, Trevor, Allen, Krisandra J, Oltean, Hanna N
Published in medRxiv : the preprint server for health sciences (16.02.2022)

by Müller, Nicola F, Wagner, Cassia, Frazar, Chris D, Roychoudhury, Pavitra, Lee, Jover, Moncla, Louise H, Pelle, Benjamin, Richardson, Matthew, Ryke, Erica, Xie, Hong, Shrestha, Lasata, Addetia, Amin, Rachleff, Victoria M, Lieberman, Nicole A P, Huang, Meei-Li, Gautom, Romesh, Melly, Geoff, Hiatt, Brian, Dykema, Philip, Adler, Amanda, Brandstetter, Elisabeth, Han, Peter D, Fay, Kairsten, Llcisin, Misja, Lacombe, Kristen, Sibley, Thomas R, Truong, Melissa, Wolf, Caitlin R, Boeckh, Michael, Englund, Janet A, Famulare, Michael, Lutz, Barry R, Rieder, Mark J, Thompson, Matthew, Duchin, Jeffrey S, Starita, Lea M, Chu, Helen Y, Shendure, Jay, Jerome, Keith R, Lindquist, Scott, Greninger, Alexander L, Nickerson, Deborah A, Bedford, Trevor
Published in medRxiv : the preprint server for health sciences (30.09.2020)