Targeting tRNA-synthetase interactions towards novel therapeutic discovery against eukaryotic pathogens
Kelly, Paul, Hadi-Nezhad, Fatemeh, Liu, Dennis Y, Lawrence, Travis J, Linington, Roger G, Ibba, Michael, Ardell, David H
Published in PLoS neglected tropical diseases (01.02.2020)
Published in PLoS neglected tropical diseases (01.02.2020)
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Journal Article
tRNA functional signatures classify plastids as late-branching cyanobacteria
Lawrence, Travis J, Amrine, Katherine Ch, Swingley, Wesley D, Ardell, David H
Published in BMC ecology and evolution (09.12.2019)
Published in BMC ecology and evolution (09.12.2019)
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Journal Article
DISCo-microbe: design of an identifiable synthetic community of microbes
Carper, Dana L, Lawrence, Travis J, Carrell, Alyssa A, Pelletier, Dale A, Weston, David J
Published in PeerJ (San Francisco, CA) (27.02.2020)
Published in PeerJ (San Francisco, CA) (27.02.2020)
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Journal Article
FAST: FAST Analysis of Sequences Toolbox
Lawrence, Travis J, Kauffman, Kyle T, Amrine, Katherine C H, Carper, Dana L, Lee, Raymond S, Becich, Peter J, Canales, Claudia J, Ardell, David H
Published in Frontiers in genetics (19.05.2015)
Published in Frontiers in genetics (19.05.2015)
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Journal Article
Isolation, Characterization, and Pathogenicity of Two Pseudomonas syringae Pathovars from Populus trichocarpa Seeds
Saint-Vincent, Patricia MB, Ridout, Mary, Engle, Nancy L., Lawrence, Travis J., Yeary, Meredith L., Tschaplinski, Timothy J., Newcombe, George, Pelletier, Dale A.
Published in Microorganisms (Basel) (28.07.2020)
Published in Microorganisms (Basel) (28.07.2020)
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Journal Article
amPEPpy 1.0: a portable and accurate antimicrobial peptide prediction tool
Lawrence, Travis J, Carper, Dana L, Spangler, Margaret K, Carrell, Alyssa A, Rush, Tomás A, Minter, Stephen J, Weston, David J, Labbé, Jessy L
Published in Bioinformatics (04.08.2021)
Published in Bioinformatics (04.08.2021)
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Journal Article
Mucin O-glycans are natural inhibitors of Candida albicans pathogenicity
Takagi, Julie, Aoki, Kazuhiro, Turner, Bradley S., Lamont, Sabrina, Lehoux, Sylvain, Kavanaugh, Nicole, Gulati, Megha, Valle Arevalo, Ashley, Lawrence, Travis J., Kim, Colin Y., Bakshi, Bhavya, Ishihara, Mayumi, Nobile, Clarissa J., Cummings, Richard D., Wozniak, Daniel J., Tiemeyer, Michael, Hevey, Rachel, Ribbeck, Katharina
Published in Nature chemical biology (01.07.2022)
Published in Nature chemical biology (01.07.2022)
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Journal Article
tSFM 1.0: tRNA Structure–Function Mapper
Lawrence, Travis J, Hadi-Nezhad, Fatemeh, Grosse, Ivo, Ardell, David H
Published in Bioinformatics (Oxford, England) (25.10.2021)
Published in Bioinformatics (Oxford, England) (25.10.2021)
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Journal Article
CD8 Follicular T Cells Promote B Cell Antibody Class Switch in Autoimmune Disease
Valentine, Kristen M, Davini, Dan, Lawrence, Travis J, Mullins, Genevieve N, Manansala, Miguel, Al-Kuhlani, Mufadhal, Pinney, James M, Davis, Jason K, Beaudin, Anna E, Sindi, Suzanne S, Gravano, David M, Hoyer, Katrina K
Published in The Journal of immunology (1950) (01.07.2018)
Published in The Journal of immunology (1950) (01.07.2018)
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Journal Article
Habitat‐adapted microbial communities mediate Sphagnum peatmoss resilience to warming
Carrell, Alyssa A., Lawrence, Travis J., Cabugao, Kristine Grace M., Carper, Dana L., Pelletier, Dale A., Lee, Jun Hyung, Jawdy, Sara S., Grimwood, Jane, Schmutz, Jeremy, Hanson, Paul J., Shaw, A. Jonathan, Weston, David J.
Published in The New phytologist (01.06.2022)
Published in The New phytologist (01.06.2022)
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Journal Article
Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism
Carrell, Alyssa A., Veličković, Dušan, Lawrence, Travis J., Bowen, Benjamin P., Louie, Katherine B., Carper, Dana L., Chu, Rosalie K., Mitchell, Hugh D., Orr, Galya, Markillie, Lye Meng, Jawdy, Sara S., Grimwood, Jane, Shaw, A. Jonathan, Schmutz, Jeremy, Northen, Trent R., Anderton, Christopher R., Pelletier, Dale A., Weston, David J.
Published in The ISME Journal (01.04.2022)
Published in The ISME Journal (01.04.2022)
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Journal Article
Needle bacterial community structure across the species range of limber pine
Carper, Dana L, Lawrence, Travis J, Quiroz, Dianne, Kueppers, Lara M, Frank, A Carolin
Published in ISME Communications (09.05.2024)
Published in ISME Communications (09.05.2024)
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Journal Article
Whole RNA-Sequencing and Transcriptome Assembly of Candida albicans and Candida africana under Chlamydospore-Inducing Conditions
Giosa, Domenico, Felice, Maria Rosa, Lawrence, Travis J, Gulati, Megha, Scordino, Fabio, Giuffrè, Letterio, Lo Passo, Carla, D'Alessandro, Enrico, Criseo, Giuseppe, Ardell, David H, Hernday, Aaron D, Nobile, Clarissa J, Romeo, Orazio
Published in Genome biology and evolution (01.07.2017)
Published in Genome biology and evolution (01.07.2017)
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Journal Article
Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe
Piatkowski, Bryan T., Carper, Dana L., Carrell, Alyssa A., Chen, I-Min A., Clum, Alicia, Daum, Chris, Eloe-Fadrosh, Emiley A., Gilbert, Daniel, Granath, Gustaf, Huntemann, Marcel, Jawdy, Sara S., Klarenberg, Ingeborg Jenneken, Kostka, Joel E., Kyrpides, Nikos C., Lawrence, Travis J., Mukherjee, Supratim, Nilsson, Mats B., Palaniappan, Krishnaveni, Pelletier, Dale A., Pennacchio, Christa, Reddy, T. B. K., Roux, Simon, Shaw, A. Jonathan, Warshan, Denis, Živković, Tatjana, Weston, David J.
Published in Microbiology resource announcements (20.10.2022)
Published in Microbiology resource announcements (20.10.2022)
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Journal Article
amPEPpy 1.0: a portable and accurate antimicrobial peptide prediction tool
Lawrence, Travis J., Carper, Dana L., Spangler, Margaret K., Carrell, Alyssa A., Rush, Tomás A., Minter, Stephen J., Weston, David J., Labbé, Jessy L., Pier Luigi, ed., Martelli
Published in Bioinformatics (Oxford, England) (02.11.2020)
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Published in Bioinformatics (Oxford, England) (02.11.2020)
Journal Article
Supercomputer-Based Ensemble Docking Drug Discovery Pipeline with Application to Covid-19
Acharya, Atanu, Agarwal, Rupesh, Baker, M. B., Baudry, Jerome Y., Bhowmik, Debsindhu, Boehm, Swen, Byler, Kendall G., Chen, S. Y., Coates, Leighton, Cooper, Connor J., Demerdash, Omar, Daidone, Isabella, Eblen, John D., Ellingson, Sally R., Forli, Stefano, Glaser, Jens, Gumbart, James C., Gunnels, John, Hernandez, Oscar, Irle, Stephan, Kneller, Daniel W., Kovalevsky, Andrii Y., Larkin, Jeffrey, Lawrence, Travis J., LeGrand, Scott, Liu, S.-H. Kevin, Mitchell, Julie C., Park, Gilchan, Parks, Jerry M., Pavlova, Anna, Petridis, Loukas, Poole, Duncan, Pouchard, Line, Ramanathan, Arvind, Rogers, David M., Santos-Martins, Diogo, Scheinberg, Aaron, Sedova, Ada, Shen, Yue, Smith, Jeremy C., Smith, Micholas D., Soto, Carlos, Tsaris, Aristeidis, Thavappiragasam, Mathialakan, Tillack, Andreas F., Vermaas, Josh V., Vuong, Van Quan, Yin, Junqi, Yoo, Shinjae, Zahran, Mai, Zanetti-Polzi, Laura
Published in Journal of chemical information and modeling (16.12.2020)
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Published in Journal of chemical information and modeling (16.12.2020)
Journal Article
Supercomputer-Based Ensemble Docking Drug Discovery Pipeline with Application to Covid-19
Acharya, Atanu, Agarwal, Rupesh, Baker, M. B., Baudry, Jerome Y., Bhowmik, Debsindhu, Boehm, Swen, Byler, Kendall G., Chen, S. Y., Coates, Leighton, Cooper, Connor J., Demerdash, Omar N., Daidone, Isabella, Eblen, John D., Ellingson, Sally R., Forli, Stefano, Glaser, Jens, Gumbart, James C., Gunnels, John, Hernandez, Oscar, Irle, Stephan, Kneller, Daniel W., Kovalevsky, Andrii Y., Larkin, Jeffrey, Lawrence, Travis J., LeGrand, Scott, Liu, S.-H. Kevin, Mitchell, Julie C., Park, Gilchan, Parks, Jerry M., Pavlova, Anna, Petridis, Loukas, Poole, Duncan, Pouchard, Line, Ramanathan, Arvind, Rogers, David M., Santos-Martins, Diogo, Scheinberg, Aaron, Sedova, Ada, Shen, Yue, Smith, Jeremy C., Smith, Micholas D., Soto, Carlos, Tsaris, Aristeidis, Thavappiragasam, Mathialakan, Tillack, Andreas F., Vermaas, Josh V., Vuong, Van Quan, Yin, Junqi, Yoo, Shinjae, Zahran, Mai, Zanetti-Polzi, Laura
Published in Journal of chemical information and modeling (16.12.2020)
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Published in Journal of chemical information and modeling (16.12.2020)
Journal Article
DISCo-microbe: Design of an identifiable synthetic community of microbes
Carper, Dana L, Lawrence, Travis J, Carrell, Alyssa A, Pelletier, Dale A, Weston, David J
Published in PeerJ preprints (13.08.2019)
Published in PeerJ preprints (13.08.2019)
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Journal Article