Evaluation of genomic island predictors using a comparative genomics approach
Langille, Morgan G I, Hsiao, William W L, Brinkman, Fiona S L
Published in BMC bioinformatics (05.08.2008)
Published in BMC bioinformatics (05.08.2008)
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Journal Article
Sifting through genomes with iterative-sequence clustering produces a large, phylogenetically diverse protein-family resource
Sharpton, Thomas J, Jospin, Guillaume, Wu, Dongying, Langille, Morgan G I, Pollard, Katherine S, Eisen, Jonathan A
Published in BMC bioinformatics (13.10.2012)
Published in BMC bioinformatics (13.10.2012)
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Journal Article
Fecal microbes, short chain fatty acids, and colorectal cancer across racial/ethnic groups
Hester, Christina M, Jala, Venkatakrishna R, Langille, Morgan Gi, Umar, Shahid, Greiner, K Allen, Haribabu, Bodduluri
Published in World journal of gastroenterology : WJG (07.03.2015)
Published in World journal of gastroenterology : WJG (07.03.2015)
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Journal Article
IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis
Dhillon, Bhavjinder K, Laird, Matthew R, Shay, Julie A, Winsor, Geoffrey L, Lo, Raymond, Nizam, Fazmin, Pereira, Sheldon K, Waglechner, Nicholas, McArthur, Andrew G, Langille, Morgan G I, Brinkman, Fiona S L
Published in Nucleic acids research (01.07.2015)
Published in Nucleic acids research (01.07.2015)
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Journal Article
Microbial shifts in the aging mouse gut
Langille, Morgan Gi, Meehan, Conor J, Koenig, Jeremy E, Dhanani, Akhilesh S, Rose, Robert A, Howlett, Susan E, Beiko, Robert G
Published in Microbiome (05.12.2014)
Published in Microbiome (05.12.2014)
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Journal Article
Interactions in the microbiome: communities of organisms and communities of genes
Boon, Eva, Meehan, Conor J., Whidden, Chris, Wong, Dennis H.-J., Langille, Morgan G.I., Beiko, Robert G.
Published in FEMS microbiology reviews (01.01.2014)
Published in FEMS microbiology reviews (01.01.2014)
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Journal Article
The phosphate binder ferric citrate alters the gut microbiome in rats with chronic kidney disease
Lau, Wei Ling, Vaziri, Nosratola D, Nunes, Ane Cf, Comeau, Andre M, Langille, Morgan Gi, England, Whitney, Khazaeli, Mahyar, Suematsu, Yasunori, Phan, Joann, Whiteson, Katrine
Published in The Journal of pharmacology and experimental therapeutics (01.12.2018)
Published in The Journal of pharmacology and experimental therapeutics (01.12.2018)
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Journal Article
Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosa
Winstanley, Craig, Langille, Morgan G I, Fothergill, Joanne L, Kukavica-Ibrulj, Irena, Paradis-Bleau, Catherine, Sanschagrin, François, Thomson, Nicholas R, Winsor, Geoff L, Quail, Michael A, Lennard, Nicola, Bignell, Alexandra, Clarke, Louise, Seeger, Kathy, Saunders, David, Harris, David, Parkhill, Julian, Hancock, Robert E W, Brinkman, Fiona S L, Levesque, Roger C
Published in Genome Research (01.01.2009)
Published in Genome Research (01.01.2009)
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Journal Article
Polyphenol-based prebiotics and synbiotics: potential for cancer chemoprevention
Thilakarathna, WPD Wass, Langille, Morgan GI, Rupasinghe, HP Vasantha
Published in Current opinion in food science (01.04.2018)
Published in Current opinion in food science (01.04.2018)
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Journal Article
The association of virulence factors with genomic islands
Ho Sui, Shannan J, Fedynak, Amber, Hsiao, William W L, Langille, Morgan G I, Brinkman, Fiona S L
Published in PloS one (01.12.2009)
Published in PloS one (01.12.2009)
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Journal Article
GenomeD3Plot: a library for rich, interactive visualizations of genomic data in web applications
Laird, Matthew R, Langille, Morgan G I, Brinkman, Fiona S L
Published in Bioinformatics (15.10.2015)
Published in Bioinformatics (15.10.2015)
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Journal Article
Denoising the Denoisers: An independent evaluation of microbiome sequence error-correction methods
Nearing, Jacob T, Douglas, Gavin M, Comeau, André M, Langille, Morgan GI
Published in PeerJ preprints (23.02.2018)
Published in PeerJ preprints (23.02.2018)
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Journal Article
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
Bolyen, Evan, Jai Ram Rideout, Bokulich, Nicholas A, Abnet, Christian, Al-Ghalith, Gabriel A, Alexander, Harriet, Alm, Eric J, Arumugam, Manimozhiyan, Asnicar, Francesco, Bai, Yang, Bisanz, Jordan E, Bittinger, Kyle, Asker Brejnrod, Brislawn, Colin J, C Titus Brown, Callahan, Benjamin J, Caraballo-Rodríguez, Andrés Mauricio, Chase, John, Cope, Emily, Da Silva, Ricardo, Dorrestein, Pieter C, Douglas, Gavin M, Durall, Daniel M, Duvallet, Claire, Edwardson, Christian F, Ernst, Madeleine, Estaki, Mehrbod, Fouquier, Jennifer, Gauglitz, Julia M, Gonzalez, Antonio, Gorlick, Kestrel, Guo, Jiarong, Holmes, Susan, Holste, Hannes, Huttenhower, Curtis, Huttley, Gavin, Janssen, Stefan, Jarmusch, Alan K, Jiang, Lingjing, Kaehler, Benjamin, Kyo Bin Kang, Keefe, Christopher R, Kelley, Scott T, Knights, Dan, Koester, Irina, Kosciolek, Tomasz, Kreps, Jorden, Langille, Morgan GI, Lee, Joslynn, Ley, Ruth, Yong-Xin, Liu, Erikka Loftfield, Lozupone, Catherine, Maher, Massoud, Marotz, Clarisse, Martin, Bryan D, McDonald, Daniel, McIver, Lauren J, Melnik, Alexey V, Metcalf, Jessica L, Morgan, Sydney C, Morton, Jamie, Louis Felix Nothias, Pearson, Talima, Peoples, Samuel L, Petras, Daniel, Mary Lai Preuss, Pruesse, Elmar, Rasmussen, Lasse Buur, Rivers, Adam, Robeson, Michael S, Rosenthal, Patrick, Segata, Nicola, Shiffer, Arron, Sinha, Rashmi, Se Jin Song, Spear, John R, Swafford, Austin D, Thompson, Luke R, Torres, Pedro J, Trinh, Pauline, Tripathi, Anupriya, Turnbaugh, Peter J, Ul-Hasan, Sabah, Justin JJ Vander Hooft, Vargas, Fernando, Vázquez-Baeza, Yoshiki, Vogtmann, Emily, Max von Hippel, Walters, William, Wan, Yunhu, Wang, Mingxun, Warren, Jonathan, Weber, Kyle C, Chase HD Williamson, Willis, Amy D, Zhenjiang Zech Xu, Zaneveld, Jesse R, Zhu, Qiyun, Caporaso, J Gregory
Published in PeerJ preprints (03.12.2018)
Published in PeerJ preprints (03.12.2018)
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Journal Article
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
Bolyen, Evan, Jai Ram Rideout, Bokulich, Nicholas A, Abnet, Christian, Al-Ghalith, Gabriel A, Alexander, Harriet, Alm, Eric J, Arumugam, Manimozhiyan, Asnicar, Francesco, Bai, Yang, Bisanz, Jordan E, Bittinger, Kyle, Asker Brejnrod, Brislawn, Colin J, C Titus Brown, Callahan, Benjamin J, Caraballo-Rodríguez, Andrés Mauricio, Chase, John, Cope, Emily, Da Silva, Ricardo, Dorrestein, Pieter C, Douglas, Gavin M, Durall, Daniel M, Duvallet, Claire, Edwardson, Christian F, Ernst, Madeleine, Estaki, Mehrbod, Fouquier, Jennifer, Gauglitz, Julia M, Gonzalez, Antonio, Gorlick, Kestrel, Guo, Jiarong, Holmes, Susan, Holste, Hannes, Huttenhower, Curtis, Huttley, Gavin, Janssen, Stefan, Jarmusch, Alan K, Jiang, Lingjing, Kaehler, Benjamin, Kyo Bin Kang, Keefe, Christopher R, Kelley, Scott T, Knights, Dan, Koester, Irina, Kosciolek, Tomasz, Kreps, Jorden, Langille, Morgan GI, Lee, Joslynn, Ley, Ruth, Yong-Xin, Liu, Erikka Loftfield, Lozupone, Catherine, Maher, Massoud, Marotz, Clarisse, Martin, Bryan, McDonald, Daniel, McIver, Lauren J, Melnik, Alexey V, Metcalf, Jessica L, Morgan, Sydney C, Morton, Jamie, Louis Felix Nothias, Pearson, Talima, Peoples, Samuel L, Petras, Daniel, Mary Lai Preuss, Pruesse, Elmar, Rasmussen, Lasse Buur, Rivers, Adam, Robeson, Michael S, Rosenthal, Patrick, Segata, Nicola, Shaffer, Michael, Shiffer, Arron, Sinha, Rashmi, Se Jin Song, Spear, John R, Swafford, Austin D, Thompson, Luke R, Torres, Pedro J, Trinh, Pauline, Tripathi, Anupriya, Turnbaugh, Peter J, Ul-Hasan, Sabah, Justin JJ Vander Hooft, Vargas, Fernando, Vázquez-Baeza, Yoshiki, Vogtmann, Emily, Max von Hippel, Walters, William, Wan, Yunhu, Wang, Mingxun, Warren, Jonathan, Weber, Kyle C, Chase HD Williamson, Willis, Amy D, Zhenjiang Zech Xu, Zaneveld, Jesse R, Knight, Rob
Published in PeerJ preprints (24.10.2018)
Published in PeerJ preprints (24.10.2018)
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Journal Article
GenGIS 2: Geospatial Analysis of Traditional and Genetic Biodiversity, with New Gradient Algorithms and an Extensible Plugin Framework. e69885
Parks, Donovan H, Mankowski, Timothy, Zangooei, Somayyeh, Porter, Michael S, Armanini, David G, Baird, Donald J, Langille, Morgan GI, Beiko, Robert G
Published in PloS one (01.07.2013)
Published in PloS one (01.07.2013)
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Journal Article