Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis
Bull, Rowena A., Adikari, Thiruni N., Ferguson, James M., Hammond, Jillian M., Stevanovski, Igor, Beukers, Alicia G., Naing, Zin, Yeang, Malinna, Verich, Andrey, Gamaarachchi, Hasindu, Kim, Ki Wook, Luciani, Fabio, Stelzer-Braid, Sacha, Eden, John-Sebastian, Rawlinson, William D., van Hal, Sebastiaan J., Deveson, Ira W.
Published in Nature communications (09.12.2020)
Published in Nature communications (09.12.2020)
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Journal Article
High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes
Singh, Mandeep, Al-Eryani, Ghamdan, Carswell, Shaun, Ferguson, James M., Blackburn, James, Barton, Kirston, Roden, Daniel, Luciani, Fabio, Giang Phan, Tri, Junankar, Simon, Jackson, Katherine, Goodnow, Christopher C., Smith, Martin A., Swarbrick, Alexander
Published in Nature communications (16.07.2019)
Published in Nature communications (16.07.2019)
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Journal Article
A Liver Capsular Network of Monocyte-Derived Macrophages Restricts Hepatic Dissemination of Intraperitoneal Bacteria by Neutrophil Recruitment
Sierro, Frederic, Evrard, Maximilien, Rizzetto, Simone, Melino, Michelle, Mitchell, Andrew J., Florido, Manuela, Beattie, Lynette, Walters, Shaun B., Tay, Szun Szun, Lu, Bo, Holz, Lauren E., Roediger, Ben, Wong, Yik Chun, Warren, Alessandra, Ritchie, William, McGuffog, Claire, Weninger, Wolfgang, Le Couteur, David G., Ginhoux, Florent, Britton, Warwick J., Heath, William R., Saunders, Bernadette M., McCaughan, Geoffrey W., Luciani, Fabio, MacDonald, Kelli P.A., Ng, Lai Guan, Bowen, David G., Bertolino, Patrick
Published in Immunity (Cambridge, Mass.) (15.08.2017)
Published in Immunity (Cambridge, Mass.) (15.08.2017)
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Journal Article
Lymphoma Driver Mutations in the Pathogenic Evolution of an Iconic Human Autoantibody
Singh, Mandeep, Jackson, Katherine J.L., Wang, Jing J., Schofield, Peter, Field, Matt A., Koppstein, David, Peters, Timothy J., Burnett, Deborah L., Rizzetto, Simone, Nevoltris, Damien, Masle-Farquhar, Etienne, Faulks, Megan L., Russell, Amanda, Gokal, Divya, Hanioka, Asami, Horikawa, Keisuke, Colella, Alexander D., Chataway, Timothy K., Blackburn, James, Mercer, Tim R., Langley, David B., Goodall, D. Margaret, Jefferis, Roy, Gangadharan Komala, Muralikrishna, Kelleher, Anthony D., Suan, Dan, Rischmueller, Maureen, Christ, Daniel, Brink, Robert, Luciani, Fabio, Gordon, Tom P., Goodnow, Christopher C., Reed, Joanne H.
Published in Cell (05.03.2020)
Published in Cell (05.03.2020)
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Atypical B cells are part of an alternative lineage of B cells that participates in responses to vaccination and infection in humans
Sutton, Henry J., Aye, Racheal, Idris, Azza H., Vistein, Rachel, Nduati, Eunice, Kai, Oscar, Mwacharo, Jedida, Li, Xi, Gao, Xin, Andrews, T. Daniel, Koutsakos, Marios, Nguyen, Thi H.O., Nekrasov, Maxim, Milburn, Peter, Eltahla, Auda, Berry, Andrea A., KC, Natasha, Chakravarty, Sumana, Sim, B. Kim Lee, Wheatley, Adam K., Kent, Stephen J., Hoffman, Stephen L., Lyke, Kirsten E., Bejon, Philip, Luciani, Fabio, Kedzierska, Katherine, Seder, Robert A., Ndungu, Francis M., Cockburn, Ian A.
Published in Cell reports (Cambridge) (09.02.2021)
Published in Cell reports (Cambridge) (09.02.2021)
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Clonally diverse CD38+HLA-DR+CD8+ T cells persist during fatal H7N9 disease
Wang, Zhongfang, Zhu, Lingyan, Nguyen, Thi H. O., Wan, Yanmin, Sant, Sneha, Quiñones-Parra, Sergio M., Crawford, Jeremy Chase, Eltahla, Auda A., Rizzetto, Simone, Bull, Rowena A., Qiu, Chenli, Koutsakos, Marios, Clemens, E. Bridie, Loh, Liyen, Chen, Tianyue, Liu, Lu, Cao, Pengxing, Ren, Yanqin, Kedzierski, Lukasz, Kotsimbos, Tom, McCaw, James M., La Gruta, Nicole L., Turner, Stephen J., Cheng, Allen C., Luciani, Fabio, Zhang, Xiaoyan, Doherty, Peter C., Thomas, Paul G., Xu, Jianqing, Kedzierska, Katherine
Published in Nature communications (26.02.2018)
Published in Nature communications (26.02.2018)
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Journal Article
Exploring and analysing single cell multi-omics data with VDJView
Samir, Jerome, Rizzetto, Simone, Gupta, Money, Luciani, Fabio
Published in BMC medical genomics (18.02.2020)
Published in BMC medical genomics (18.02.2020)
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Journal Article
Conserved epitopes with high HLA-I population coverage are targets of CD8+ T cells associated with high IFN-γ responses against all dengue virus serotypes
Adikari, Thiruni N., Di Giallonardo, Francesca, Leung, Preston, Grifoni, Alba, Sette, Alex, Weiskopf, Daniela, Bull, Rowena A., Luciani, Fabio
Published in Scientific reports (24.11.2020)
Published in Scientific reports (24.11.2020)
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Journal Article
Memory B cells are reactivated in subcapsular proliferative foci of lymph nodes
Moran, Imogen, Nguyen, Akira, Khoo, Weng Hua, Butt, Danyal, Bourne, Katherine, Young, Clara, Hermes, Jana R., Biro, Maté, Gracie, Gary, Ma, Cindy S., Munier, C. Mee Ling, Luciani, Fabio, Zaunders, John, Parker, Andrew, Kelleher, Anthony D., Tangye, Stuart G., Croucher, Peter I., Brink, Robert, Read, Mark N., Phan, Tri Giang
Published in Nature communications (22.08.2018)
Published in Nature communications (22.08.2018)
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Journal Article
Sequential bottlenecks drive viral evolution in early acute hepatitis C virus infection
Bull, Rowena A, Luciani, Fabio, McElroy, Kerensa, Gaudieri, Silvana, Pham, Son T, Chopra, Abha, Cameron, Barbara, Maher, Lisa, Dore, Gregory J, White, Peter A, Lloyd, Andrew R
Published in PLoS pathogens (01.09.2011)
Published in PLoS pathogens (01.09.2011)
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Journal Article
Viral quasispecies assembly via maximal clique enumeration
Töpfer, Armin, Marschall, Tobias, Bull, Rowena A, Luciani, Fabio, Schönhuth, Alexander, Beerenwinkel, Niko
Published in PLoS computational biology (01.03.2014)
Published in PLoS computational biology (01.03.2014)
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Journal Article
Broadly neutralizing antibodies from an individual that naturally cleared multiple hepatitis C virus infections uncover molecular determinants for E2 targeting and vaccine design
Keck, Zhen-Yong, Pierce, Brian G, Lau, Patrick, Lu, Janine, Wang, Yong, Underwood, Alexander, Bull, Rowena A, Prentoe, Jannick, Velázquez-Moctezuma, Rodrigo, Walker, Melanie R, Luciani, Fabio, Guest, Johnathan D, Fauvelle, Catherine, Baumert, Thomas F, Bukh, Jens, Lloyd, Andrew R, Foung, Steven K H
Published in PLoS pathogens (17.05.2019)
Published in PLoS pathogens (17.05.2019)
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Journal Article
Inhibitors of the Hepatitis C Virus Polymerase; Mode of Action and Resistance
Eltahla, Auda A, Luciani, Fabio, White, Peter A, Lloyd, Andrew R, Bull, Rowena A
Published in Viruses (29.09.2015)
Published in Viruses (29.09.2015)
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Journal Article
Book Review
Higher abundance of enterovirus A species in the gut of children with islet autoimmunity
Kim, Ki Wook, Horton, Jessica L., Pang, Chi Nam Ignatius, Jain, Komal, Leung, Preston, Isaacs, Sonia R., Bull, Rowena A., Luciani, Fabio, Wilkins, Marc R., Catteau, Jacki, Lipkin, W. Ian, Rawlinson, William D., Briese, Thomas, Craig, Maria E.
Published in Scientific reports (11.02.2019)
Published in Scientific reports (11.02.2019)
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Journal Article
CAR+ and CAR− T cells share a differentiation trajectory into an NK-like subset after CD19 CAR T cell infusion in patients with B cell malignancies
Louie, Raymond Hall Yip, Cai, Curtis, Samir, Jerome, Singh, Mandeep, Deveson, Ira W., Ferguson, James M., Amos, Timothy G., McGuire, Helen Marie, Gowrishankar, Kavitha, Adikari, Thiruni, Balderas, Robert, Bonomi, Martina, Ruella, Marco, Bishop, David, Gottlieb, David, Blyth, Emily, Micklethwaite, Kenneth, Luciani, Fabio
Published in Nature communications (27.11.2023)
Published in Nature communications (27.11.2023)
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Journal Article
Hepatitis C treatment strategies in prisons: A cost-effectiveness analysis
Kwon, Jisoo A, Chambers, Georgina M, Luciani, Fabio, Zhang, Lei, Kinathil, Shamin, Kim, Dennis, Thein, Hla-Hla, Botha, Willings, Thompson, Sandra, Lloyd, Andrew, Yap, Lorraine, Gray, Richard T, Butler, Tony
Published in PloS one (11.02.2021)
Published in PloS one (11.02.2021)
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Journal Article
Cytotoxic T cells swarm by homotypic chemokine signalling
Galeano Niño, Jorge Luis, Pageon, Sophie V, Tay, Szun S, Colakoglu, Feyza, Kempe, Daryan, Hywood, Jack, Mazalo, Jessica K, Cremasco, James, Govendir, Matt A, Dagley, Laura F, Hsu, Kenneth, Rizzetto, Simone, Zieba, Jerzy, Rice, Gregory, Prior, Victoria, O'Neill, Geraldine M, Williams, Richard J, Nisbet, David R, Kramer, Belinda, Webb, Andrew I, Luciani, Fabio, Read, Mark N, Biro, Maté
Published in eLife (13.10.2020)
Published in eLife (13.10.2020)
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Journal Article
Contribution of Intra- and Interhost Dynamics to Norovirus Evolution
BULL, Rowena A, EDEN, John-Sebastian, LUCIANI, Fabio, MCELROY, Kerensa, RAWLINSON, William D, WHITE, Peter A
Published in Journal of Virology (01.03.2012)
Published in Journal of Virology (01.03.2012)
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